RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 KRTAP13-1Q8IUC0 172 aa8.09□□□□□ -1.11
VHL-201ENST00000256474 DNAH17Q9UFH2 4485 aa8.09□□□□□ -1.11
VHL-201ENST00000256474 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.11
VHL-201ENST00000256474 ZNF706Q9Y5V0 76 aaPredicted RBP8.09□□□□□ -1.11
VHL-201ENST00000256474 ZNF861PO60384 105 aa8.08□□□□□ -1.12
VHL-201ENST00000256474 Q96NJ1 140 aa8.08□□□□□ -1.12
VHL-201ENST00000256474 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
VHL-201ENST00000256474 MRPL34Q9BQ48 92 aaKnown RBP8.07□□□□□ -1.12
VHL-201ENST00000256474 VPS13DQ5THJ4 4388 aa8.06□□□□□ -1.12
VHL-201ENST00000256474 C1orf134Q5TEV5 83 aa8.06□□□□□ -1.12
VHL-201ENST00000256474 Q5VV11 94 aa8.06□□□□□ -1.12
VHL-201ENST00000256474 H3BPC8 53 aa8.04□□□□□ -1.12
VHL-201ENST00000256474 SPANXA2-OT1Q8N9U9 137 aa8.02□□□□□ -1.13
VHL-201ENST00000256474 PRR26Q8N8Z3 221 aa8.02□□□□□ -1.13
VHL-201ENST00000256474 TP53AIP1Q9HCN2 124 aa8.02□□□□□ -1.13
VHL-201ENST00000256474 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
VHL-201ENST00000256474 LIMD2Q9BT23 127 aa8□□□□□ -1.13
VHL-201ENST00000256474 Q5W150 140 aa8□□□□□ -1.13
VHL-201ENST00000256474 PRAC1Q96KF2 57 aa8□□□□□ -1.13
VHL-201ENST00000256474 DNHD1Q96M86 4753 aa7.99□□□□□ -1.13
VHL-201ENST00000256474 RBM12B-AS1Q9P1G2 102 aa7.99□□□□□ -1.13
VHL-201ENST00000256474 IGLV7-43P04211 117 aa7.99□□□□□ -1.13
VHL-201ENST00000256474 KRTAP10-2P60368 255 aa7.96□□□□□ -1.13
VHL-201ENST00000256474 HRES1P13985 223 aa7.96□□□□□ -1.14
VHL-201ENST00000256474 PLAC8Q9NZF1 115 aa7.96□□□□□ -1.14
VHL-201ENST00000256474 LINC00483Q53H64 154 aa7.95□□□□□ -1.14
VHL-201ENST00000256474 DYNC2H1Q8NCM8 4307 aaKnown RBP7.93□□□□□ -1.14
VHL-201ENST00000256474 ALMS1Q8TCU4 4167 aa7.93□□□□□ -1.14
VHL-201ENST00000256474 IGKV2D-30A0A075B6S6 120 aa7.92□□□□□ -1.14
VHL-201ENST00000256474 IGKV2-30P06310 120 aa7.92□□□□□ -1.14
VHL-201ENST00000256474 FAT2Q9NYQ8 4349 aa7.92□□□□□ -1.14
VHL-201ENST00000256474 SPINK1P00995 79 aa7.92□□□□□ -1.14
VHL-201ENST00000256474 DNAH11Q96DT5 4516 aa7.91□□□□□ -1.14
VHL-201ENST00000256474 LINC00313P59037 77 aa7.9□□□□□ -1.14
VHL-201ENST00000256474 Q6ZR54 194 aa7.9□□□□□ -1.14
VHL-201ENST00000256474 LCA10Q71F78 164 aa7.9□□□□□ -1.14
VHL-201ENST00000256474 HYDINQ4G0P3 5121 aa7.89□□□□□ -1.15
VHL-201ENST00000256474 LOC101927531A0A1B0GV80 90 aa7.89□□□□□ -1.15
VHL-201ENST00000256474 SPINK7P58062 85 aa7.89□□□□□ -1.15
VHL-201ENST00000256474 KTN1-AS1Q86SY8 53 aa7.88□□□□□ -1.15
VHL-201ENST00000256474 H3BS24 57 aa7.85□□□□□ -1.15
VHL-201ENST00000256474 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
VHL-201ENST00000256474 ASB16-AS1Q495Z4 193 aa7.84□□□□□ -1.15
VHL-201ENST00000256474 KRTAP10-1P60331 282 aa7.82□□□□□ -1.16
VHL-201ENST00000256474 Q75L30 129 aa7.82□□□□□ -1.16
VHL-201ENST00000256474 LRP1BQ9NZR2 4599 aa7.82□□□□□ -1.16
VHL-201ENST00000256474 DNAH5Q8TE73 4624 aa7.81□□□□□ -1.16
VHL-201ENST00000256474 ACYP2P14621 99 aa7.81□□□□□ -1.16
VHL-201ENST00000256474 SSBP3-AS1Q7Z2R9 100 aa7.8□□□□□ -1.16
VHL-201ENST00000256474 PLA2G1BP04054 148 aaKnown RBP7.8□□□□□ -1.16
VHL-201ENST00000256474 KRTAP13-2Q52LG2 175 aa7.8□□□□□ -1.16
VHL-201ENST00000256474 SMR3BP02814 79 aaPredicted RBP7.79□□□□□ -1.16
VHL-201ENST00000256474 LINC01558Q9Y6Z2 57 aa7.79□□□□□ -1.16
VHL-201ENST00000256474 PKHD1P08F94 4074 aa7.76□□□□□ -1.17
VHL-201ENST00000256474 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
VHL-201ENST00000256474 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
VHL-201ENST00000256474 TYMSOSQ8TAI1 123 aa7.75□□□□□ -1.17
VHL-201ENST00000256474 A0A1B0GU69 56 aa7.75□□□□□ -1.17
VHL-201ENST00000256474 C7orf65Q6ZTY9 151 aa7.75□□□□□ -1.17
VHL-201ENST00000256474 CDC42SE1Q9NRR8 79 aa7.75□□□□□ -1.17
VHL-201ENST00000256474 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
VHL-201ENST00000256474 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
VHL-201ENST00000256474 ATP11AUNQ6ZP68 121 aa7.74□□□□□ -1.17
VHL-201ENST00000256474 Q8N1X5 172 aa7.74□□□□□ -1.17
VHL-201ENST00000256474 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
VHL-201ENST00000256474 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
VHL-201ENST00000256474 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
VHL-201ENST00000256474 PKD1P98161 4303 aa7.65□□□□□ -1.18
VHL-201ENST00000256474 DMAC1Q96GE9 116 aa7.63□□□□□ -1.19
VHL-201ENST00000256474 A6NN06 94 aa7.61□□□□□ -1.19
VHL-201ENST00000256474 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
VHL-201ENST00000256474 LINC00304Q8N9R0 145 aa7.57□□□□□ -1.2
VHL-201ENST00000256474 MIR22HGQ0VDD5 57 aa7.56□□□□□ -1.2
VHL-201ENST00000256474 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
VHL-201ENST00000256474 CSAG1Q6PB30 78 aa7.55□□□□□ -1.2
VHL-201ENST00000256474 LINC01554Q52M75 96 aa7.55□□□□□ -1.2
VHL-201ENST00000256474 UQCR11O14957 56 aa7.53□□□□□ -1.2
VHL-201ENST00000256474 Q6ZSA8 131 aa7.53□□□□□ -1.2
VHL-201ENST00000256474 FAT1Q14517 4588 aa7.51□□□□□ -1.21
VHL-201ENST00000256474 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
VHL-201ENST00000256474 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
VHL-201ENST00000256474 KRTAP21-3Q3LHN1 58 aa7.37□□□□□ -1.23
VHL-201ENST00000256474 MYCBP2O75592 4640 aa7.34□□□□□ -1.23
VHL-201ENST00000256474 SACSQ9NZJ4 4579 aa7.33□□□□□ -1.24
VHL-201ENST00000256474 LRP1Q07954 4544 aaKnown RBP7.3□□□□□ -1.24
VHL-201ENST00000256474 K7ERS5 55 aa7.3□□□□□ -1.24
VHL-201ENST00000256474 DYNC1H1Q14204 4646 aaKnown RBP7.29□□□□□ -1.24
VHL-201ENST00000256474 KMT2CQ8NEZ4 4911 aaKnown RBP7.29□□□□□ -1.24
VHL-201ENST00000256474 A0A0D9SG42 100 aa7.28□□□□□ -1.24
VHL-201ENST00000256474 A0A1B0GU33 70 aa7.26□□□□□ -1.25
VHL-201ENST00000256474 KRTAP3-1Q9BYR8 98 aa7.23□□□□□ -1.25
VHL-201ENST00000256474 H0YAA0 97 aa7.22□□□□□ -1.25
VHL-201ENST00000256474 HSPG2P98160 4391 aa7.22□□□□□ -1.25
VHL-201ENST00000256474 PKHD1L1Q86WI1 4243 aa7.2□□□□□ -1.26
VHL-201ENST00000256474 A8MUU9 505 aa7.2□□□□□ -1.26
VHL-201ENST00000256474 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
VHL-201ENST00000256474 C20orf166-AS1Q96NR2 134 aa7.18□□□□□ -1.26
VHL-201ENST00000256474 LPAP08519 4548 aa7.18□□□□□ -1.26
VHL-201ENST00000256474 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
VHL-201ENST00000256474 RPS29P62273 56 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms