RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PKD1P98161 4303 aa6.12□□□□□ -1.43
COPB1-201ENST00000249923 SPINK1P00995 79 aa6.1□□□□□ -1.43
COPB1-201ENST00000249923 FLG2Q5D862 2391 aaPredicted RBP6.09□□□□□ -1.43
COPB1-201ENST00000249923 FAT2Q9NYQ8 4349 aa6.09□□□□□ -1.43
COPB1-201ENST00000249923 LRP1BQ9NZR2 4599 aa6.09□□□□□ -1.43
COPB1-201ENST00000249923 PRAC1Q96KF2 57 aa6.09□□□□□ -1.44
COPB1-201ENST00000249923 CYP4F30PQ9H0H9 118 aa6.09□□□□□ -1.44
COPB1-201ENST00000249923 RBM12B-AS1Q9P1G2 102 aa6.09□□□□□ -1.44
COPB1-201ENST00000249923 MMP24-AS1A0A0U1RRL7 71 aa6.08□□□□□ -1.44
COPB1-201ENST00000249923 LCA10Q71F78 164 aa6.08□□□□□ -1.44
COPB1-201ENST00000249923 A0A087WTM6 91 aa6.08□□□□□ -1.44
COPB1-201ENST00000249923 LOC101927531A0A1B0GV80 90 aa6.08□□□□□ -1.44
COPB1-201ENST00000249923 SPINK7P58062 85 aa6.08□□□□□ -1.44
COPB1-201ENST00000249923 CD164Q04900 197 aa6.06□□□□□ -1.44
COPB1-201ENST00000249923 NUPR2A6NF83 97 aa6.06□□□□□ -1.44
COPB1-201ENST00000249923 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
COPB1-201ENST00000249923 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
COPB1-201ENST00000249923 WWC2-AS2Q96NR7 200 aa6.05□□□□□ -1.44
COPB1-201ENST00000249923 PSORS1C2Q9UIG4 136 aa6.05□□□□□ -1.44
COPB1-201ENST00000249923 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
COPB1-201ENST00000249923 C8orf17Q9NRJ1 99 aa6.04□□□□□ -1.44
COPB1-201ENST00000249923 Q6ZR54 194 aa6.03□□□□□ -1.44
COPB1-201ENST00000249923 VPS13BQ7Z7G8 4022 aa6.03□□□□□ -1.44
COPB1-201ENST00000249923 IGLV5-52A0A0A0MRZ9 124 aa6.03□□□□□ -1.44
COPB1-201ENST00000249923 RTL8CO15255 209 aa6.03□□□□□ -1.44
COPB1-201ENST00000249923 A0A087X002 238 aa6.02□□□□□ -1.44
COPB1-201ENST00000249923 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.44
COPB1-201ENST00000249923 ATP11AUNQ6ZP68 121 aa6.02□□□□□ -1.45
COPB1-201ENST00000249923 IGKV2D-30A0A075B6S6 120 aa6.02□□□□□ -1.45
COPB1-201ENST00000249923 IGKV2-30P06310 120 aa6.02□□□□□ -1.45
COPB1-201ENST00000249923 PLAC8Q9NZF1 115 aa6□□□□□ -1.45
COPB1-201ENST00000249923 PKHD1P08F94 4074 aa5.99□□□□□ -1.45
COPB1-201ENST00000249923 HRES1P13985 223 aa5.99□□□□□ -1.45
COPB1-201ENST00000249923 SPANXA2-OT1Q8N9U9 137 aa5.99□□□□□ -1.45
COPB1-201ENST00000249923 MRPL34Q9BQ48 92 aaKnown RBP5.99□□□□□ -1.45
COPB1-201ENST00000249923 IGLV7-46A0A075B6I9 117 aa5.98□□□□□ -1.45
COPB1-201ENST00000249923 H3BPC8 53 aa5.98□□□□□ -1.45
COPB1-201ENST00000249923 A0A1B0GU69 56 aa5.97□□□□□ -1.45
COPB1-201ENST00000249923 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
COPB1-201ENST00000249923 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
COPB1-201ENST00000249923 A0A1B0GVX0 72 aa5.97□□□□□ -1.45
COPB1-201ENST00000249923 ZNF861PO60384 105 aa5.97□□□□□ -1.45
COPB1-201ENST00000249923 TP53AIP1Q9HCN2 124 aa5.96□□□□□ -1.46
COPB1-201ENST00000249923 Q75L30 129 aa5.95□□□□□ -1.46
COPB1-201ENST00000249923 C7orf65Q6ZTY9 151 aa5.95□□□□□ -1.46
COPB1-201ENST00000249923 LINC00313P59037 77 aa5.92□□□□□ -1.46
COPB1-201ENST00000249923 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
COPB1-201ENST00000249923 ACYP2P14621 99 aa5.92□□□□□ -1.46
COPB1-201ENST00000249923 Q5W150 140 aa5.91□□□□□ -1.46
COPB1-201ENST00000249923 ZNF706Q9Y5V0 76 aaPredicted RBP5.91□□□□□ -1.46
COPB1-201ENST00000249923 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
COPB1-201ENST00000249923 KRTAP13-3Q3SY46 172 aa5.9□□□□□ -1.47
COPB1-201ENST00000249923 LY6G6CO95867 125 aa5.89□□□□□ -1.47
COPB1-201ENST00000249923 LINC01558Q9Y6Z2 57 aa5.89□□□□□ -1.47
COPB1-201ENST00000249923 C1orf134Q5TEV5 83 aa5.88□□□□□ -1.47
COPB1-201ENST00000249923 A6NN06 94 aa5.87□□□□□ -1.47
COPB1-201ENST00000249923 Q8N1X5 172 aa5.86□□□□□ -1.47
COPB1-201ENST00000249923 SACSQ9NZJ4 4579 aa5.85□□□□□ -1.47
COPB1-201ENST00000249923 KRTAP13-2Q52LG2 175 aa5.85□□□□□ -1.47
COPB1-201ENST00000249923 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
COPB1-201ENST00000249923 C4orf48Q5BLP8 95 aa5.84□□□□□ -1.47
COPB1-201ENST00000249923 C8orf87E5RJ46 101 aa5.83□□□□□ -1.48
COPB1-201ENST00000249923 CRIPTQ9P021 101 aa5.83□□□□□ -1.48
COPB1-201ENST00000249923 KRTAP10-1P60331 282 aa5.82□□□□□ -1.48
COPB1-201ENST00000249923 Q6ZSA8 131 aa5.81□□□□□ -1.48
COPB1-201ENST00000249923 UQCR11O14957 56 aa5.8□□□□□ -1.48
COPB1-201ENST00000249923 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
COPB1-201ENST00000249923 CSAG1Q6PB30 78 aa5.79□□□□□ -1.48
COPB1-201ENST00000249923 DYNC1H1Q14204 4646 aaKnown RBP5.77□□□□□ -1.49
COPB1-201ENST00000249923 FAT1Q14517 4588 aa5.77□□□□□ -1.49
COPB1-201ENST00000249923 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
COPB1-201ENST00000249923 SSBP3-AS1Q7Z2R9 100 aa5.76□□□□□ -1.49
COPB1-201ENST00000249923 FAM229AH3BQW9 127 aa5.75□□□□□ -1.49
COPB1-201ENST00000249923 H3BS24 57 aa5.75□□□□□ -1.49
COPB1-201ENST00000249923 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
COPB1-201ENST00000249923 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
COPB1-201ENST00000249923 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
COPB1-201ENST00000249923 C9orf92A6NGG3 77 aa5.73□□□□□ -1.49
COPB1-201ENST00000249923 PLA2G1BP04054 148 aaKnown RBP5.68□□□□□ -1.5
COPB1-201ENST00000249923 KMT2CQ8NEZ4 4911 aaKnown RBP5.68□□□□□ -1.5
COPB1-201ENST00000249923 DMAC1Q96GE9 116 aa5.67□□□□□ -1.5
COPB1-201ENST00000249923 SMR3BP02814 79 aaPredicted RBP5.66□□□□□ -1.5
COPB1-201ENST00000249923 TYMSOSQ8TAI1 123 aa5.65□□□□□ -1.5
COPB1-201ENST00000249923 RYR2Q92736 4967 aa5.64□□□□□ -1.51
COPB1-201ENST00000249923 A0A0D9SG42 100 aa5.62□□□□□ -1.51
COPB1-201ENST00000249923 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
COPB1-201ENST00000249923 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
COPB1-201ENST00000249923 K7ERS5 55 aa5.58□□□□□ -1.52
COPB1-201ENST00000249923 KRTAP10-4P60372 401 aaPredicted RBP5.57□□□□□ -1.52
COPB1-201ENST00000249923 TNXBP22105 4242 aa5.56□□□□□ -1.52
COPB1-201ENST00000249923 HSPG2P98160 4391 aa5.53□□□□□ -1.52
COPB1-201ENST00000249923 A0A1B0GU33 70 aa5.53□□□□□ -1.52
COPB1-201ENST00000249923 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
COPB1-201ENST00000249923 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
COPB1-201ENST00000249923 LINC00304Q8N9R0 145 aa5.51□□□□□ -1.53
COPB1-201ENST00000249923 A0A1B0GVY2 172 aa5.51□□□□□ -1.53
COPB1-201ENST00000249923 RYR3Q15413 4870 aa5.49□□□□□ -1.53
COPB1-201ENST00000249923 MYCBP2O75592 4640 aa5.48□□□□□ -1.53
COPB1-201ENST00000249923 RPS29P62273 56 aaKnown RBP5.47□□□□□ -1.53
COPB1-201ENST00000249923 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms