RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ZNF706Q9Y5V0 76 aaPredicted RBP9.23□□□□□ -0.93
DDX55-201ENST00000238146 PLECQ15149 4684 aaKnown RBP9.23□□□□□ -0.93
DDX55-201ENST00000238146 A6NN06 94 aa9.22□□□□□ -0.93
DDX55-201ENST00000238146 PSORS1C2Q9UIG4 136 aa9.2□□□□□ -0.94
DDX55-201ENST00000238146 MDFIQ99750 246 aa9.19□□□□□ -0.94
DDX55-201ENST00000238146 SPINK7P58062 85 aa9.19□□□□□ -0.94
DDX55-201ENST00000238146 IGLV5-52A0A0A0MRZ9 124 aa9.18□□□□□ -0.94
DDX55-201ENST00000238146 Q5W150 140 aa9.18□□□□□ -0.94
DDX55-201ENST00000238146 DNAH8Q96JB1 4490 aa9.17□□□□□ -0.94
DDX55-201ENST00000238146 FRAS1Q86XX4 4008 aa9.16□□□□□ -0.94
DDX55-201ENST00000238146 ZNF861PO60384 105 aa9.16□□□□□ -0.94
DDX55-201ENST00000238146 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
DDX55-201ENST00000238146 PRR26Q8N8Z3 221 aa9.15□□□□□ -0.95
DDX55-201ENST00000238146 A0A087WTM6 91 aa9.14□□□□□ -0.95
DDX55-201ENST00000238146 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
DDX55-201ENST00000238146 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
DDX55-201ENST00000238146 HECTD4Q9Y4D8 3996 aa9.1□□□□□ -0.95
DDX55-201ENST00000238146 RTL8CO15255 209 aa9.1□□□□□ -0.95
DDX55-201ENST00000238146 NUPR2A6NF83 97 aa9.08□□□□□ -0.96
DDX55-201ENST00000238146 ACYP2P14621 99 aa9.06□□□□□ -0.96
DDX55-201ENST00000238146 VPS13DQ5THJ4 4388 aa9.06□□□□□ -0.96
DDX55-201ENST00000238146 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
DDX55-201ENST00000238146 CIRBP-AS1Q8TBR5 109 aa9.06□□□□□ -0.96
DDX55-201ENST00000238146 STARD9Q9P2P6 4700 aa9.02□□□□□ -0.97
DDX55-201ENST00000238146 ALMS1Q8TCU4 4167 aa9.02□□□□□ -0.97
DDX55-201ENST00000238146 DNAH17Q9UFH2 4485 aa9.01□□□□□ -0.97
DDX55-201ENST00000238146 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
DDX55-201ENST00000238146 DMAC1Q96GE9 116 aa9.01□□□□□ -0.97
DDX55-201ENST00000238146 C8orf87E5RJ46 101 aa9□□□□□ -0.97
DDX55-201ENST00000238146 DNAH2Q9P225 4427 aa8.98□□□□□ -0.97
DDX55-201ENST00000238146 SSBP3-AS1Q7Z2R9 100 aa8.96□□□□□ -0.97
DDX55-201ENST00000238146 KMT2AQ03164 3969 aa8.96□□□□□ -0.98
DDX55-201ENST00000238146 LINC00313P59037 77 aa8.96□□□□□ -0.98
DDX55-201ENST00000238146 FAM229AH3BQW9 127 aa8.95□□□□□ -0.98
DDX55-201ENST00000238146 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
DDX55-201ENST00000238146 FBN3Q75N90 2809 aa8.93□□□□□ -0.98
DDX55-201ENST00000238146 PRKDCP78527 4128 aaKnown RBP8.92□□□□□ -0.98
DDX55-201ENST00000238146 IGKV2-30P06310 120 aa8.91□□□□□ -0.98
DDX55-201ENST00000238146 A0A1B0GU69 56 aa8.9□□□□□ -0.98
DDX55-201ENST00000238146 MEGF8Q7Z7M0 2845 aa8.9□□□□□ -0.98
DDX55-201ENST00000238146 TGP01266 2768 aa8.89□□□□□ -0.99
DDX55-201ENST00000238146 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
DDX55-201ENST00000238146 KRTAP16-1A8MUX0 517 aa8.85□□□□□ -0.99
DDX55-201ENST00000238146 KRTAP13-2Q52LG2 175 aa8.84□□□□□ -0.99
DDX55-201ENST00000238146 C1orf134Q5TEV5 83 aa8.84□□□□□ -0.99
DDX55-201ENST00000238146 DNAH11Q96DT5 4516 aa8.83□□□□□ -1
DDX55-201ENST00000238146 PRAC1Q96KF2 57 aa8.83□□□□□ -1
DDX55-201ENST00000238146 DNAH6Q9C0G6 4158 aa8.81□□□□□ -1
DDX55-201ENST00000238146 ADM2Q7Z4H4 148 aa8.8□□□□□ -1
DDX55-201ENST00000238146 PLA2G1BP04054 148 aaKnown RBP8.79□□□□□ -1
DDX55-201ENST00000238146 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
DDX55-201ENST00000238146 MIR22HGQ0VDD5 57 aa8.78□□□□□ -1
DDX55-201ENST00000238146 UQCR11O14957 56 aa8.77□□□□□ -1
DDX55-201ENST00000238146 DNAH5Q8TE73 4624 aa8.76□□□□□ -1.01
DDX55-201ENST00000238146 KRTAP10-2P60368 255 aa8.75□□□□□ -1.01
DDX55-201ENST00000238146 LRP1BQ9NZR2 4599 aa8.71□□□□□ -1.02
DDX55-201ENST00000238146 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
DDX55-201ENST00000238146 LY6G6CO95867 125 aa8.68□□□□□ -1.02
DDX55-201ENST00000238146 Q6ZSA8 131 aa8.64□□□□□ -1.03
DDX55-201ENST00000238146 KRTAP10-1P60331 282 aa8.63□□□□□ -1.03
DDX55-201ENST00000238146 SPINK1P00995 79 aa8.62□□□□□ -1.03
DDX55-201ENST00000238146 LINC01554Q52M75 96 aa8.61□□□□□ -1.03
DDX55-201ENST00000238146 Q8N1X5 172 aa8.6□□□□□ -1.03
DDX55-201ENST00000238146 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
DDX55-201ENST00000238146 VPS13BQ7Z7G8 4022 aa8.58□□□□□ -1.04
DDX55-201ENST00000238146 TYMSOSQ8TAI1 123 aa8.57□□□□□ -1.04
DDX55-201ENST00000238146 PKD1P98161 4303 aa8.56□□□□□ -1.04
DDX55-201ENST00000238146 CSAG1Q6PB30 78 aa8.53□□□□□ -1.04
DDX55-201ENST00000238146 FAT2Q9NYQ8 4349 aa8.49□□□□□ -1.05
DDX55-201ENST00000238146 H0YAA0 97 aa8.46□□□□□ -1.06
DDX55-201ENST00000238146 LINC00304Q8N9R0 145 aa8.44□□□□□ -1.06
DDX55-201ENST00000238146 HYDINQ4G0P3 5121 aa8.43□□□□□ -1.06
DDX55-201ENST00000238146 RPS29P62273 56 aaKnown RBP8.41□□□□□ -1.06
DDX55-201ENST00000238146 A8MUU9 505 aa8.4□□□□□ -1.07
DDX55-201ENST00000238146 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.07
DDX55-201ENST00000238146 DNHD1Q96M86 4753 aa8.37□□□□□ -1.07
DDX55-201ENST00000238146 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
DDX55-201ENST00000238146 A0A1B0GU33 70 aa8.36□□□□□ -1.07
DDX55-201ENST00000238146 C20orf166-AS1Q96NR2 134 aa8.36□□□□□ -1.07
DDX55-201ENST00000238146 H1FX-AS1Q4G0G2 97 aa8.32□□□□□ -1.08
DDX55-201ENST00000238146 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
DDX55-201ENST00000238146 PKHD1P08F94 4074 aa8.28□□□□□ -1.08
DDX55-201ENST00000238146 KRTAP25-1Q3LHN0 102 aa8.26□□□□□ -1.09
DDX55-201ENST00000238146 SMR3BP02814 79 aaPredicted RBP8.23□□□□□ -1.09
DDX55-201ENST00000238146 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.1
DDX55-201ENST00000238146 COX6B2Q6YFQ2 88 aa8.18□□□□□ -1.1
DDX55-201ENST00000238146 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
DDX55-201ENST00000238146 FAT1Q14517 4588 aa8.16□□□□□ -1.1
DDX55-201ENST00000238146 DYNC1H1Q14204 4646 aaKnown RBP8.15□□□□□ -1.1
DDX55-201ENST00000238146 H3BS24 57 aa8.14□□□□□ -1.11
DDX55-201ENST00000238146 K7ERS5 55 aa8.13□□□□□ -1.11
DDX55-201ENST00000238146 APOBP04114 4563 aaKnown RBP8.13□□□□□ -1.11
DDX55-201ENST00000238146 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
DDX55-201ENST00000238146 CRIPTQ9P021 101 aa8.11□□□□□ -1.11
DDX55-201ENST00000238146 ROMO1P60602 79 aa8.09□□□□□ -1.11
DDX55-201ENST00000238146 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
DDX55-201ENST00000238146 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.13
DDX55-201ENST00000238146 RPL37P61927 97 aaKnown RBP7.99□□□□□ -1.13
DDX55-201ENST00000238146 KRTAP13-4Q3LI77 160 aa7.99□□□□□ -1.13
DDX55-201ENST00000238146 DMBT1Q9UGM3 2413 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms