RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 Q6ZR54 194 aa9.57□□□□□ -0.88
DDX1-201ENST00000233084 CHTF8P0CG12 524 aa9.56□□□□□ -0.88
DDX1-201ENST00000233084 C8orf17Q9NRJ1 99 aa9.56□□□□□ -0.88
DDX1-201ENST00000233084 KRTAP1-5Q9BYS1 174 aa9.55□□□□□ -0.88
DDX1-201ENST00000233084 IGLV9-49A0A0B4J1Y8 123 aa9.55□□□□□ -0.88
DDX1-201ENST00000233084 H3BS24 57 aa9.53□□□□□ -0.88
DDX1-201ENST00000233084 Q96NJ1 140 aa9.53□□□□□ -0.88
DDX1-201ENST00000233084 LINC01554Q52M75 96 aa9.53□□□□□ -0.88
DDX1-201ENST00000233084 ALMS1Q8TCU4 4167 aa9.52□□□□□ -0.88
DDX1-201ENST00000233084 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
DDX1-201ENST00000233084 SPRR1BP22528 89 aa9.51□□□□□ -0.89
DDX1-201ENST00000233084 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
DDX1-201ENST00000233084 DNAH2Q9P225 4427 aa9.5□□□□□ -0.89
DDX1-201ENST00000233084 A0A087X002 238 aa9.49□□□□□ -0.89
DDX1-201ENST00000233084 NOTCH2NLQ7Z3S9 236 aa9.49□□□□□ -0.89
DDX1-201ENST00000233084 NBDYA0A0U1RRE5 68 aa9.47□□□□□ -0.89
DDX1-201ENST00000233084 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
DDX1-201ENST00000233084 MRPL34Q9BQ48 92 aaKnown RBP9.47□□□□□ -0.89
DDX1-201ENST00000233084 HYDINQ4G0P3 5121 aa9.46□□□□□ -0.9
DDX1-201ENST00000233084 A0A1B0GVX0 72 aa9.46□□□□□ -0.9
DDX1-201ENST00000233084 CDK2AP2O75956 126 aa9.46□□□□□ -0.9
DDX1-201ENST00000233084 Q5W150 140 aa9.42□□□□□ -0.9
DDX1-201ENST00000233084 SACSQ9NZJ4 4579 aa9.42□□□□□ -0.9
DDX1-201ENST00000233084 A0A1B0GU69 56 aa9.41□□□□□ -0.9
DDX1-201ENST00000233084 LY6G6CO95867 125 aa9.41□□□□□ -0.9
DDX1-201ENST00000233084 FRAS1Q86XX4 4008 aa9.4□□□□□ -0.9
DDX1-201ENST00000233084 ACYP2P14621 99 aa9.4□□□□□ -0.9
DDX1-201ENST00000233084 Q6ZRN7 208 aaPredicted RBP9.39□□□□□ -0.91
DDX1-201ENST00000233084 RTL8CO15255 209 aa9.38□□□□□ -0.91
DDX1-201ENST00000233084 SPINK6Q6UWN8 80 aa9.37□□□□□ -0.91
DDX1-201ENST00000233084 DNAH17Q9UFH2 4485 aa9.37□□□□□ -0.91
DDX1-201ENST00000233084 HECTD4Q9Y4D8 3996 aa9.35□□□□□ -0.91
DDX1-201ENST00000233084 CSAG1Q6PB30 78 aa9.35□□□□□ -0.91
DDX1-201ENST00000233084 ANAPC11Q9NYG5 84 aa9.34□□□□□ -0.91
DDX1-201ENST00000233084 MIR22HGQ0VDD5 57 aa9.33□□□□□ -0.92
DDX1-201ENST00000233084 SPATA8Q6RVD6 105 aa9.33□□□□□ -0.92
DDX1-201ENST00000233084 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
DDX1-201ENST00000233084 PANO1I0J062 215 aa9.32□□□□□ -0.92
DDX1-201ENST00000233084 KMT2CQ8NEZ4 4911 aaKnown RBP9.3□□□□□ -0.92
DDX1-201ENST00000233084 FAT2Q9NYQ8 4349 aa9.29□□□□□ -0.92
DDX1-201ENST00000233084 KRTAP13-1Q8IUC0 172 aa9.29□□□□□ -0.92
DDX1-201ENST00000233084 C1orf134Q5TEV5 83 aa9.28□□□□□ -0.92
DDX1-201ENST00000233084 DNAH11Q96DT5 4516 aa9.27□□□□□ -0.93
DDX1-201ENST00000233084 UQCR11O14957 56 aa9.27□□□□□ -0.93
DDX1-201ENST00000233084 KRTAP13-3Q3SY46 172 aa9.26□□□□□ -0.93
DDX1-201ENST00000233084 RYR2Q92736 4967 aa9.26□□□□□ -0.93
DDX1-201ENST00000233084 DMAC1Q96GE9 116 aa9.26□□□□□ -0.93
DDX1-201ENST00000233084 C14orf177Q52M58 125 aa9.25□□□□□ -0.93
DDX1-201ENST00000233084 A0A087WTM6 91 aa9.24□□□□□ -0.93
DDX1-201ENST00000233084 PKD1P98161 4303 aa9.22□□□□□ -0.93
DDX1-201ENST00000233084 DNAH5Q8TE73 4624 aa9.22□□□□□ -0.93
DDX1-201ENST00000233084 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
DDX1-201ENST00000233084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
DDX1-201ENST00000233084 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
DDX1-201ENST00000233084 RYR3Q15413 4870 aa9.12□□□□□ -0.95
DDX1-201ENST00000233084 ZNF861PO60384 105 aa9.11□□□□□ -0.95
DDX1-201ENST00000233084 PKHD1P08F94 4074 aa9.11□□□□□ -0.95
DDX1-201ENST00000233084 ZNF706Q9Y5V0 76 aaPredicted RBP9.11□□□□□ -0.95
DDX1-201ENST00000233084 DNAH8Q96JB1 4490 aa9.09□□□□□ -0.95
DDX1-201ENST00000233084 KRTAP10-2P60368 255 aa9.09□□□□□ -0.95
DDX1-201ENST00000233084 PSORS1C2Q9UIG4 136 aa9.09□□□□□ -0.95
DDX1-201ENST00000233084 IGLV5-52A0A0A0MRZ9 124 aa9.08□□□□□ -0.96
DDX1-201ENST00000233084 SPINK1P00995 79 aa9.07□□□□□ -0.96
DDX1-201ENST00000233084 IGKV2-30P06310 120 aa9.06□□□□□ -0.96
DDX1-201ENST00000233084 IGKV2D-30A0A075B6S6 120 aa9.06□□□□□ -0.96
DDX1-201ENST00000233084 FAM229AH3BQW9 127 aa9.06□□□□□ -0.96
DDX1-201ENST00000233084 SPACA4Q8TDM5 124 aa9.05□□□□□ -0.96
DDX1-201ENST00000233084 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
DDX1-201ENST00000233084 LRP1BQ9NZR2 4599 aa9□□□□□ -0.97
DDX1-201ENST00000233084 DYNC1H1Q14204 4646 aaKnown RBP8.98□□□□□ -0.97
DDX1-201ENST00000233084 A0A1B0GVY2 172 aa8.96□□□□□ -0.97
DDX1-201ENST00000233084 KRTAP10-1P60331 282 aa8.96□□□□□ -0.98
DDX1-201ENST00000233084 FLG2Q5D862 2391 aaPredicted RBP8.95□□□□□ -0.98
DDX1-201ENST00000233084 ROMO1P60602 79 aa8.92□□□□□ -0.98
DDX1-201ENST00000233084 KRTAP25-1Q3LHN0 102 aa8.92□□□□□ -0.98
DDX1-201ENST00000233084 Q6ZSA8 131 aa8.92□□□□□ -0.98
DDX1-201ENST00000233084 Q8N1X5 172 aa8.91□□□□□ -0.98
DDX1-201ENST00000233084 CRIPTQ9P021 101 aa8.9□□□□□ -0.98
DDX1-201ENST00000233084 A8MUU9 505 aa8.89□□□□□ -0.99
DDX1-201ENST00000233084 APOBP04114 4563 aaKnown RBP8.89□□□□□ -0.99
DDX1-201ENST00000233084 H0YAA0 97 aa8.88□□□□□ -0.99
DDX1-201ENST00000233084 LINC00304Q8N9R0 145 aa8.88□□□□□ -0.99
DDX1-201ENST00000233084 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
DDX1-201ENST00000233084 VPS13BQ7Z7G8 4022 aa8.83□□□□□ -1
DDX1-201ENST00000233084 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
DDX1-201ENST00000233084 TYMSOSQ8TAI1 123 aa8.8□□□□□ -1
DDX1-201ENST00000233084 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
DDX1-201ENST00000233084 FAT1Q14517 4588 aa8.74□□□□□ -1.01
DDX1-201ENST00000233084 A0A1B0GU33 70 aa8.73□□□□□ -1.01
DDX1-201ENST00000233084 P0C880 135 aa8.73□□□□□ -1.01
DDX1-201ENST00000233084 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.02
DDX1-201ENST00000233084 HSPG2P98160 4391 aa8.7□□□□□ -1.02
DDX1-201ENST00000233084 RYR1P21817 5038 aa8.69□□□□□ -1.02
DDX1-201ENST00000233084 SMR3BP02814 79 aaPredicted RBP8.66□□□□□ -1.02
DDX1-201ENST00000233084 H1FX-AS1Q4G0G2 97 aa8.64□□□□□ -1.03
DDX1-201ENST00000233084 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
DDX1-201ENST00000233084 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
DDX1-201ENST00000233084 K7ERS5 55 aa8.58□□□□□ -1.04
DDX1-201ENST00000233084 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
DDX1-201ENST00000233084 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms