RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 CDK2AP2O75956 126 aa8.34□□□□□ -1.07
SCNN1A-201ENST00000228916 DNAH8Q96JB1 4490 aa8.34□□□□□ -1.07
SCNN1A-201ENST00000228916 SPACA4Q8TDM5 124 aa8.34□□□□□ -1.08
SCNN1A-201ENST00000228916 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.32□□□□□ -1.08
SCNN1A-201ENST00000228916 Q6ZRN7 208 aaPredicted RBP8.32□□□□□ -1.08
SCNN1A-201ENST00000228916 ZNF706Q9Y5V0 76 aaPredicted RBP8.32□□□□□ -1.08
SCNN1A-201ENST00000228916 STARD9Q9P2P6 4700 aa8.31□□□□□ -1.08
SCNN1A-201ENST00000228916 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
SCNN1A-201ENST00000228916 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
SCNN1A-201ENST00000228916 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
SCNN1A-201ENST00000228916 Q5W150 140 aa8.28□□□□□ -1.08
SCNN1A-201ENST00000228916 C4orf48Q5BLP8 95 aa8.28□□□□□ -1.08
SCNN1A-201ENST00000228916 DNAH2Q9P225 4427 aa8.28□□□□□ -1.08
SCNN1A-201ENST00000228916 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.08
SCNN1A-201ENST00000228916 MDFIQ99750 246 aa8.27□□□□□ -1.08
SCNN1A-201ENST00000228916 VPS13DQ5THJ4 4388 aa8.27□□□□□ -1.09
SCNN1A-201ENST00000228916 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
SCNN1A-201ENST00000228916 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
SCNN1A-201ENST00000228916 ALMS1Q8TCU4 4167 aa8.25□□□□□ -1.09
SCNN1A-201ENST00000228916 DNAH17Q9UFH2 4485 aa8.25□□□□□ -1.09
SCNN1A-201ENST00000228916 IGLV5-52A0A0A0MRZ9 124 aa8.25□□□□□ -1.09
SCNN1A-201ENST00000228916 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
SCNN1A-201ENST00000228916 PRKDCP78527 4128 aaKnown RBP8.24□□□□□ -1.09
SCNN1A-201ENST00000228916 ZNF861PO60384 105 aa8.22□□□□□ -1.09
SCNN1A-201ENST00000228916 ACYP2P14621 99 aa8.22□□□□□ -1.09
SCNN1A-201ENST00000228916 FBN3Q75N90 2809 aa8.21□□□□□ -1.09
SCNN1A-201ENST00000228916 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
SCNN1A-201ENST00000228916 DMAC1Q96GE9 116 aa8.18□□□□□ -1.1
SCNN1A-201ENST00000228916 A0A087WTM6 91 aa8.18□□□□□ -1.1
SCNN1A-201ENST00000228916 NUPR2A6NF83 97 aa8.16□□□□□ -1.1
SCNN1A-201ENST00000228916 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
SCNN1A-201ENST00000228916 RTL8CO15255 209 aa8.14□□□□□ -1.11
SCNN1A-201ENST00000228916 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
SCNN1A-201ENST00000228916 LINC00313P59037 77 aa8.12□□□□□ -1.11
SCNN1A-201ENST00000228916 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
SCNN1A-201ENST00000228916 CIRBP-AS1Q8TBR5 109 aa8.11□□□□□ -1.11
SCNN1A-201ENST00000228916 TGP01266 2768 aa8.11□□□□□ -1.11
SCNN1A-201ENST00000228916 FAM229AH3BQW9 127 aa8.09□□□□□ -1.11
SCNN1A-201ENST00000228916 A0A1B0GU69 56 aa8.09□□□□□ -1.11
SCNN1A-201ENST00000228916 DNAH11Q96DT5 4516 aa8.08□□□□□ -1.12
SCNN1A-201ENST00000228916 IGLV7-43P04211 117 aa8.08□□□□□ -1.12
SCNN1A-201ENST00000228916 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
SCNN1A-201ENST00000228916 IGKV2-30P06310 120 aa8.07□□□□□ -1.12
SCNN1A-201ENST00000228916 H3BS24 57 aa8.07□□□□□ -1.12
SCNN1A-201ENST00000228916 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
SCNN1A-201ENST00000228916 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
SCNN1A-201ENST00000228916 PRAC1Q96KF2 57 aa8.05□□□□□ -1.12
SCNN1A-201ENST00000228916 DNAH5Q8TE73 4624 aa8.03□□□□□ -1.12
SCNN1A-201ENST00000228916 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
SCNN1A-201ENST00000228916 RETNLBQ9BQ08 111 aa8.01□□□□□ -1.13
SCNN1A-201ENST00000228916 KRTAP16-1A8MUX0 517 aa7.99□□□□□ -1.13
SCNN1A-201ENST00000228916 UQCR11O14957 56 aa7.99□□□□□ -1.13
SCNN1A-201ENST00000228916 MIR22HGQ0VDD5 57 aa7.99□□□□□ -1.13
SCNN1A-201ENST00000228916 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
SCNN1A-201ENST00000228916 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
SCNN1A-201ENST00000228916 C1orf134Q5TEV5 83 aa7.93□□□□□ -1.14
SCNN1A-201ENST00000228916 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
SCNN1A-201ENST00000228916 IGKV2D-30A0A075B6S6 120 aa7.9□□□□□ -1.14
SCNN1A-201ENST00000228916 PKD1P98161 4303 aa7.89□□□□□ -1.15
SCNN1A-201ENST00000228916 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
SCNN1A-201ENST00000228916 VPS13BQ7Z7G8 4022 aa7.86□□□□□ -1.15
SCNN1A-201ENST00000228916 DNHD1Q96M86 4753 aa7.85□□□□□ -1.15
SCNN1A-201ENST00000228916 FAT2Q9NYQ8 4349 aa7.83□□□□□ -1.16
SCNN1A-201ENST00000228916 LY6G6CO95867 125 aa7.83□□□□□ -1.16
SCNN1A-201ENST00000228916 HYDINQ4G0P3 5121 aa7.82□□□□□ -1.16
SCNN1A-201ENST00000228916 KRTAP1-4P0C5Y4 121 aa7.79□□□□□ -1.16
SCNN1A-201ENST00000228916 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
SCNN1A-201ENST00000228916 KRTAP21-3Q3LHN1 58 aa7.78□□□□□ -1.16
SCNN1A-201ENST00000228916 KRTAP10-1P60331 282 aa7.76□□□□□ -1.17
SCNN1A-201ENST00000228916 Q6ZSA8 131 aa7.75□□□□□ -1.17
SCNN1A-201ENST00000228916 SPINK1P00995 79 aa7.75□□□□□ -1.17
SCNN1A-201ENST00000228916 Q8N1X5 172 aa7.74□□□□□ -1.17
SCNN1A-201ENST00000228916 PKHD1P08F94 4074 aa7.68□□□□□ -1.18
SCNN1A-201ENST00000228916 H0YAA0 97 aa7.68□□□□□ -1.18
SCNN1A-201ENST00000228916 A8MUU9 505 aa7.66□□□□□ -1.18
SCNN1A-201ENST00000228916 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
SCNN1A-201ENST00000228916 RPS29P62273 56 aaKnown RBP7.59□□□□□ -1.19
SCNN1A-201ENST00000228916 LINC00304Q8N9R0 145 aa7.59□□□□□ -1.19
SCNN1A-201ENST00000228916 A0A1B0GU33 70 aa7.58□□□□□ -1.2
SCNN1A-201ENST00000228916 KRTAP3-1Q9BYR8 98 aa7.57□□□□□ -1.2
SCNN1A-201ENST00000228916 KRTAP25-1Q3LHN0 102 aa7.56□□□□□ -1.2
SCNN1A-201ENST00000228916 H1FX-AS1Q4G0G2 97 aa7.55□□□□□ -1.2
SCNN1A-201ENST00000228916 C20orf166-AS1Q96NR2 134 aa7.54□□□□□ -1.2
SCNN1A-201ENST00000228916 SACSQ9NZJ4 4579 aa7.54□□□□□ -1.2
SCNN1A-201ENST00000228916 FAT1Q14517 4588 aa7.49□□□□□ -1.21
SCNN1A-201ENST00000228916 PKHD1L1Q86WI1 4243 aa7.48□□□□□ -1.21
SCNN1A-201ENST00000228916 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
SCNN1A-201ENST00000228916 C9orf92A6NGG3 77 aa7.47□□□□□ -1.21
SCNN1A-201ENST00000228916 APOBP04114 4563 aaKnown RBP7.44□□□□□ -1.22
SCNN1A-201ENST00000228916 ROMO1P60602 79 aa7.42□□□□□ -1.22
SCNN1A-201ENST00000228916 SMR3BP02814 79 aaPredicted RBP7.42□□□□□ -1.22
SCNN1A-201ENST00000228916 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
SCNN1A-201ENST00000228916 K7ERS5 55 aa7.39□□□□□ -1.23
SCNN1A-201ENST00000228916 FLG2Q5D862 2391 aaPredicted RBP7.37□□□□□ -1.23
SCNN1A-201ENST00000228916 CRIPTQ9P021 101 aa7.32□□□□□ -1.24
SCNN1A-201ENST00000228916 KRTAP10-4P60372 401 aaPredicted RBP7.32□□□□□ -1.24
SCNN1A-201ENST00000228916 KRTAP10-6P60371 365 aaPredicted RBP7.27□□□□□ -1.25
SCNN1A-201ENST00000228916 RPL37P61927 97 aaKnown RBP7.25□□□□□ -1.25
SCNN1A-201ENST00000228916 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
SCNN1A-201ENST00000228916 KRTAP3-3Q9BYR6 98 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms