RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 KRTAP13-1Q8IUC0 172 aa8.44□□□□□ -1.06
SF1-201ENST00000227503 DNHD1Q96M86 4753 aa8.44□□□□□ -1.06
SF1-201ENST00000227503 TP53AIP1Q9HCN2 124 aa8.44□□□□□ -1.06
SF1-201ENST00000227503 Q6ZRN7 208 aaPredicted RBP8.43□□□□□ -1.06
SF1-201ENST00000227503 NBDYA0A0U1RRE5 68 aa8.43□□□□□ -1.06
SF1-201ENST00000227503 ASB16-AS1Q495Z4 193 aa8.43□□□□□ -1.06
SF1-201ENST00000227503 Q5W150 140 aa8.43□□□□□ -1.06
SF1-201ENST00000227503 VPS13DQ5THJ4 4388 aa8.42□□□□□ -1.06
SF1-201ENST00000227503 ALMS1Q8TCU4 4167 aa8.41□□□□□ -1.06
SF1-201ENST00000227503 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
SF1-201ENST00000227503 SPINK6Q6UWN8 80 aa8.41□□□□□ -1.06
SF1-201ENST00000227503 A0A1B0GVX0 72 aa8.4□□□□□ -1.06
SF1-201ENST00000227503 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.06
SF1-201ENST00000227503 RETNLBQ9BQ08 111 aa8.39□□□□□ -1.07
SF1-201ENST00000227503 CDK2AP2O75956 126 aa8.37□□□□□ -1.07
SF1-201ENST00000227503 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.37□□□□□ -1.07
SF1-201ENST00000227503 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
SF1-201ENST00000227503 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
SF1-201ENST00000227503 TGP01266 2768 aa8.36□□□□□ -1.07
SF1-201ENST00000227503 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
SF1-201ENST00000227503 HECTD4Q9Y4D8 3996 aa8.36□□□□□ -1.07
SF1-201ENST00000227503 MEGF8Q7Z7M0 2845 aa8.35□□□□□ -1.07
SF1-201ENST00000227503 DNAH8Q96JB1 4490 aa8.35□□□□□ -1.07
SF1-201ENST00000227503 NUPR2A6NF83 97 aa8.34□□□□□ -1.07
SF1-201ENST00000227503 DNAH2Q9P225 4427 aa8.33□□□□□ -1.08
SF1-201ENST00000227503 DNAH17Q9UFH2 4485 aa8.33□□□□□ -1.08
SF1-201ENST00000227503 LINC00483Q53H64 154 aa8.32□□□□□ -1.08
SF1-201ENST00000227503 LINC01554Q52M75 96 aa8.31□□□□□ -1.08
SF1-201ENST00000227503 A0A087WTM6 91 aa8.29□□□□□ -1.08
SF1-201ENST00000227503 H3BS24 57 aa8.29□□□□□ -1.08
SF1-201ENST00000227503 A0A1B0GU69 56 aa8.28□□□□□ -1.08
SF1-201ENST00000227503 ACYP2P14621 99 aa8.28□□□□□ -1.08
SF1-201ENST00000227503 PLA2G1BP04054 148 aaKnown RBP8.27□□□□□ -1.09
SF1-201ENST00000227503 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
SF1-201ENST00000227503 WWC2-AS2Q96NR7 200 aa8.26□□□□□ -1.09
SF1-201ENST00000227503 PSORS1C2Q9UIG4 136 aa8.25□□□□□ -1.09
SF1-201ENST00000227503 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
SF1-201ENST00000227503 IGLV5-52A0A0A0MRZ9 124 aa8.24□□□□□ -1.09
SF1-201ENST00000227503 RTL8CO15255 209 aa8.24□□□□□ -1.09
SF1-201ENST00000227503 CSAG1Q6PB30 78 aa8.24□□□□□ -1.09
SF1-201ENST00000227503 ZNF706Q9Y5V0 76 aaPredicted RBP8.24□□□□□ -1.09
SF1-201ENST00000227503 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
SF1-201ENST00000227503 ZNF861PO60384 105 aa8.2□□□□□ -1.1
SF1-201ENST00000227503 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
SF1-201ENST00000227503 CIRBP-AS1Q8TBR5 109 aa8.19□□□□□ -1.1
SF1-201ENST00000227503 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
SF1-201ENST00000227503 FBN3Q75N90 2809 aa8.16□□□□□ -1.1
SF1-201ENST00000227503 DNAH11Q96DT5 4516 aa8.13□□□□□ -1.11
SF1-201ENST00000227503 UQCR11O14957 56 aa8.13□□□□□ -1.11
SF1-201ENST00000227503 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
SF1-201ENST00000227503 DNAH5Q8TE73 4624 aa8.11□□□□□ -1.11
SF1-201ENST00000227503 SPINK1P00995 79 aa8.1□□□□□ -1.11
SF1-201ENST00000227503 DNAH6Q9C0G6 4158 aa8.1□□□□□ -1.11
SF1-201ENST00000227503 IGLV7-43P04211 117 aa8.1□□□□□ -1.11
SF1-201ENST00000227503 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
SF1-201ENST00000227503 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
SF1-201ENST00000227503 C1orf134Q5TEV5 83 aa8.07□□□□□ -1.12
SF1-201ENST00000227503 FAM229AH3BQW9 127 aa8.01□□□□□ -1.13
SF1-201ENST00000227503 SSBP3-AS1Q7Z2R9 100 aa8□□□□□ -1.13
SF1-201ENST00000227503 LRP1BQ9NZR2 4599 aa7.99□□□□□ -1.13
SF1-201ENST00000227503 Q8N1X5 172 aa7.98□□□□□ -1.13
SF1-201ENST00000227503 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
SF1-201ENST00000227503 HYDINQ4G0P3 5121 aa7.97□□□□□ -1.13
SF1-201ENST00000227503 LY6G6CO95867 125 aa7.97□□□□□ -1.13
SF1-201ENST00000227503 PKD1P98161 4303 aa7.95□□□□□ -1.14
SF1-201ENST00000227503 CRIPTQ9P021 101 aa7.95□□□□□ -1.14
SF1-201ENST00000227503 FAT2Q9NYQ8 4349 aa7.93□□□□□ -1.14
SF1-201ENST00000227503 KRTAP13-2Q52LG2 175 aa7.93□□□□□ -1.14
SF1-201ENST00000227503 KRTAP16-1A8MUX0 517 aa7.9□□□□□ -1.15
SF1-201ENST00000227503 Q6ZSA8 131 aa7.89□□□□□ -1.15
SF1-201ENST00000227503 H0YAA0 97 aa7.89□□□□□ -1.15
SF1-201ENST00000227503 KRTAP10-1P60331 282 aa7.87□□□□□ -1.15
SF1-201ENST00000227503 VPS13BQ7Z7G8 4022 aa7.86□□□□□ -1.15
SF1-201ENST00000227503 TYMSOSQ8TAI1 123 aa7.86□□□□□ -1.15
SF1-201ENST00000227503 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
SF1-201ENST00000227503 KRTAP1-4P0C5Y4 121 aa7.84□□□□□ -1.15
SF1-201ENST00000227503 A8MUU9 505 aa7.83□□□□□ -1.16
SF1-201ENST00000227503 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
SF1-201ENST00000227503 ROMO1P60602 79 aa7.8□□□□□ -1.16
SF1-201ENST00000227503 DMBT1Q9UGM3 2413 aaPredicted RBP7.77□□□□□ -1.16
SF1-201ENST00000227503 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
SF1-201ENST00000227503 SACSQ9NZJ4 4579 aa7.71□□□□□ -1.17
SF1-201ENST00000227503 A0A1B0GU33 70 aa7.71□□□□□ -1.18
SF1-201ENST00000227503 P0C880 135 aa7.69□□□□□ -1.18
SF1-201ENST00000227503 H1FX-AS1Q4G0G2 97 aa7.64□□□□□ -1.19
SF1-201ENST00000227503 KRTAP3-1Q9BYR8 98 aa7.62□□□□□ -1.19
SF1-201ENST00000227503 DYNC1H1Q14204 4646 aaKnown RBP7.61□□□□□ -1.19
SF1-201ENST00000227503 C9orf92A6NGG3 77 aa7.61□□□□□ -1.19
SF1-201ENST00000227503 KMT2CQ8NEZ4 4911 aaKnown RBP7.6□□□□□ -1.19
SF1-201ENST00000227503 PKHD1L1Q86WI1 4243 aa7.59□□□□□ -1.19
SF1-201ENST00000227503 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
SF1-201ENST00000227503 FAT1Q14517 4588 aa7.58□□□□□ -1.2
SF1-201ENST00000227503 APOBP04114 4563 aaKnown RBP7.55□□□□□ -1.2
SF1-201ENST00000227503 COX6B2Q6YFQ2 88 aa7.54□□□□□ -1.2
SF1-201ENST00000227503 A0A0D9SG42 100 aa7.5□□□□□ -1.21
SF1-201ENST00000227503 SMR3BP02814 79 aaPredicted RBP7.5□□□□□ -1.21
SF1-201ENST00000227503 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
SF1-201ENST00000227503 SPINT4Q6UDR6 99 aa7.49□□□□□ -1.21
SF1-201ENST00000227503 K7ERS5 55 aa7.49□□□□□ -1.21
SF1-201ENST00000227503 TPRXLQ17RH7 258 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms