RNA–Protein interactions for RNA: ENST00000226091.2

EFNB3-201, Transcript of ephrin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB3, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3-201ENST00000226091 A0A087X002 238 aa9.99□□□□□ -0.81
EFNB3-201ENST00000226091 NOTCH2NLQ7Z3S9 236 aa9.99□□□□□ -0.81
EFNB3-201ENST00000226091 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
EFNB3-201ENST00000226091 COA5Q86WW8 74 aa9.96□□□□□ -0.82
EFNB3-201ENST00000226091 KRTAP10-2P60368 255 aa9.95□□□□□ -0.82
EFNB3-201ENST00000226091 DNAH17Q9UFH2 4485 aa9.95□□□□□ -0.82
EFNB3-201ENST00000226091 ATP11AUNQ6ZP68 121 aa9.95□□□□□ -0.82
EFNB3-201ENST00000226091 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
EFNB3-201ENST00000226091 DNAH8Q96JB1 4490 aa9.93□□□□□ -0.82
EFNB3-201ENST00000226091 PRAC1Q96KF2 57 aa9.92□□□□□ -0.82
EFNB3-201ENST00000226091 MMP24-AS1A0A0U1RRL7 71 aa9.92□□□□□ -0.82
EFNB3-201ENST00000226091 ZNF861PO60384 105 aa9.9□□□□□ -0.82
EFNB3-201ENST00000226091 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
EFNB3-201ENST00000226091 Q96NJ1 140 aa9.88□□□□□ -0.83
EFNB3-201ENST00000226091 DYNC2H1Q8NCM8 4307 aaKnown RBP9.88□□□□□ -0.83
EFNB3-201ENST00000226091 LOC101927531A0A1B0GV80 90 aa9.87□□□□□ -0.83
EFNB3-201ENST00000226091 SPINK7P58062 85 aa9.87□□□□□ -0.83
EFNB3-201ENST00000226091 A6NN06 94 aa9.86□□□□□ -0.83
EFNB3-201ENST00000226091 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
EFNB3-201ENST00000226091 C7orf65Q6ZTY9 151 aa9.85□□□□□ -0.83
EFNB3-201ENST00000226091 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
EFNB3-201ENST00000226091 Q75L30 129 aa9.84□□□□□ -0.83
EFNB3-201ENST00000226091 Q6ZR54 194 aa9.83□□□□□ -0.84
EFNB3-201ENST00000226091 HYDINQ4G0P3 5121 aa9.83□□□□□ -0.84
EFNB3-201ENST00000226091 CDC42SE1Q9NRR8 79 aa9.83□□□□□ -0.84
EFNB3-201ENST00000226091 H3BPC8 53 aa9.82□□□□□ -0.84
EFNB3-201ENST00000226091 SPANXA2-OT1Q8N9U9 137 aa9.82□□□□□ -0.84
EFNB3-201ENST00000226091 IGLV7-43P04211 117 aa9.81□□□□□ -0.84
EFNB3-201ENST00000226091 ADM2Q7Z4H4 148 aa9.8□□□□□ -0.84
EFNB3-201ENST00000226091 ZNF706Q9Y5V0 76 aaPredicted RBP9.8□□□□□ -0.84
EFNB3-201ENST00000226091 LRP1BQ9NZR2 4599 aa9.79□□□□□ -0.84
EFNB3-201ENST00000226091 A0A1B0GVX0 72 aa9.78□□□□□ -0.84
EFNB3-201ENST00000226091 PLAC8Q9NZF1 115 aa9.78□□□□□ -0.84
EFNB3-201ENST00000226091 C8orf87E5RJ46 101 aa9.78□□□□□ -0.84
EFNB3-201ENST00000226091 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
EFNB3-201ENST00000226091 SMR3BP02814 79 aaPredicted RBP9.76□□□□□ -0.85
EFNB3-201ENST00000226091 LINC00313P59037 77 aa9.75□□□□□ -0.85
EFNB3-201ENST00000226091 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
EFNB3-201ENST00000226091 ASB16-AS1Q495Z4 193 aa9.75□□□□□ -0.85
EFNB3-201ENST00000226091 PRR26Q8N8Z3 221 aa9.75□□□□□ -0.85
EFNB3-201ENST00000226091 MRPL34Q9BQ48 92 aaKnown RBP9.73□□□□□ -0.85
EFNB3-201ENST00000226091 H3BS24 57 aa9.72□□□□□ -0.85
EFNB3-201ENST00000226091 IGLV7-46A0A075B6I9 117 aa9.72□□□□□ -0.85
EFNB3-201ENST00000226091 Q5W150 140 aa9.71□□□□□ -0.85
EFNB3-201ENST00000226091 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
EFNB3-201ENST00000226091 TP53AIP1Q9HCN2 124 aa9.69□□□□□ -0.86
EFNB3-201ENST00000226091 PKHD1P08F94 4074 aa9.67□□□□□ -0.86
EFNB3-201ENST00000226091 FAT2Q9NYQ8 4349 aa9.65□□□□□ -0.86
EFNB3-201ENST00000226091 HRES1P13985 223 aa9.65□□□□□ -0.86
EFNB3-201ENST00000226091 LINC01558Q9Y6Z2 57 aa9.65□□□□□ -0.87
EFNB3-201ENST00000226091 FLG2Q5D862 2391 aaPredicted RBP9.63□□□□□ -0.87
EFNB3-201ENST00000226091 ALMS1Q8TCU4 4167 aa9.63□□□□□ -0.87
EFNB3-201ENST00000226091 VPS13BQ7Z7G8 4022 aa9.62□□□□□ -0.87
EFNB3-201ENST00000226091 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
EFNB3-201ENST00000226091 IGKV2D-30A0A075B6S6 120 aa9.61□□□□□ -0.87
EFNB3-201ENST00000226091 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
EFNB3-201ENST00000226091 KRTAP13-2Q52LG2 175 aa9.61□□□□□ -0.87
EFNB3-201ENST00000226091 DMBT1Q9UGM3 2413 aaPredicted RBP9.6□□□□□ -0.87
EFNB3-201ENST00000226091 FAT1Q14517 4588 aa9.57□□□□□ -0.88
EFNB3-201ENST00000226091 LINC01554Q52M75 96 aa9.56□□□□□ -0.88
EFNB3-201ENST00000226091 TYMSOSQ8TAI1 123 aa9.52□□□□□ -0.89
EFNB3-201ENST00000226091 SPINK1P00995 79 aa9.51□□□□□ -0.89
EFNB3-201ENST00000226091 SSBP3-AS1Q7Z2R9 100 aa9.49□□□□□ -0.89
EFNB3-201ENST00000226091 KRTAP13-3Q3SY46 172 aa9.49□□□□□ -0.89
EFNB3-201ENST00000226091 C9orf92A6NGG3 77 aa9.48□□□□□ -0.89
EFNB3-201ENST00000226091 A0A1B0GU69 56 aa9.45□□□□□ -0.9
EFNB3-201ENST00000226091 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
EFNB3-201ENST00000226091 PKD1P98161 4303 aa9.43□□□□□ -0.9
EFNB3-201ENST00000226091 KRTAP1-4P0C5Y4 121 aa9.4□□□□□ -0.9
EFNB3-201ENST00000226091 Q8N1X5 172 aa9.4□□□□□ -0.91
EFNB3-201ENST00000226091 ACYP2P14621 99 aa9.36□□□□□ -0.91
EFNB3-201ENST00000226091 MIR22HGQ0VDD5 57 aa9.35□□□□□ -0.91
EFNB3-201ENST00000226091 Q6ZSA8 131 aa9.34□□□□□ -0.91
EFNB3-201ENST00000226091 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
EFNB3-201ENST00000226091 KMT2CQ8NEZ4 4911 aaKnown RBP9.31□□□□□ -0.92
EFNB3-201ENST00000226091 SACSQ9NZJ4 4579 aa9.31□□□□□ -0.92
EFNB3-201ENST00000226091 DYNC1H1Q14204 4646 aaKnown RBP9.3□□□□□ -0.92
EFNB3-201ENST00000226091 LINC00304Q8N9R0 145 aa9.3□□□□□ -0.92
EFNB3-201ENST00000226091 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
EFNB3-201ENST00000226091 MYCBP2O75592 4640 aa9.28□□□□□ -0.92
EFNB3-201ENST00000226091 UQCR11O14957 56 aa9.27□□□□□ -0.93
EFNB3-201ENST00000226091 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
EFNB3-201ENST00000226091 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
EFNB3-201ENST00000226091 CRIPTQ9P021 101 aa9.19□□□□□ -0.94
EFNB3-201ENST00000226091 SPATA8Q6RVD6 105 aa9.19□□□□□ -0.94
EFNB3-201ENST00000226091 APOBP04114 4563 aaKnown RBP9.16□□□□□ -0.94
EFNB3-201ENST00000226091 FAT3Q8TDW7 4589 aa9.04□□□□□ -0.96
EFNB3-201ENST00000226091 KIAA1109Q2LD37 5005 aa8.95□□□□□ -0.98
EFNB3-201ENST00000226091 RYR2Q92736 4967 aa8.94□□□□□ -0.98
EFNB3-201ENST00000226091 ROMO1P60602 79 aa8.93□□□□□ -0.98
EFNB3-201ENST00000226091 A0A1B0GVY2 172 aa8.91□□□□□ -0.98
EFNB3-201ENST00000226091 RYR3Q15413 4870 aa8.88□□□□□ -0.99
EFNB3-201ENST00000226091 KRTAP25-1Q3LHN0 102 aa8.88□□□□□ -0.99
EFNB3-201ENST00000226091 Q5VSD8 79 aa8.88□□□□□ -0.99
EFNB3-201ENST00000226091 HSPG2P98160 4391 aa8.86□□□□□ -0.99
EFNB3-201ENST00000226091 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
EFNB3-201ENST00000226091 PKHD1L1Q86WI1 4243 aa8.84□□□□□ -0.99
EFNB3-201ENST00000226091 KRTAP3-1Q9BYR8 98 aa8.83□□□□□ -1
EFNB3-201ENST00000226091 A8MUU9 505 aa8.82□□□□□ -1
EFNB3-201ENST00000226091 RPS29P62273 56 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms