RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 DMAC1Q96GE9 116 aa5.23□□□□□ -1.57
SUPT16H-201ENST00000216297 Q96NJ1 140 aa5.23□□□□□ -1.57
SUPT16H-201ENST00000216297 ITPR2Q14571 2701 aa5.23□□□□□ -1.57
SUPT16H-201ENST00000216297 KRTAP10-11P60412 298 aa5.22□□□□□ -1.57
SUPT16H-201ENST00000216297 KMT2BQ9UMN6 2715 aaPredicted RBP5.21□□□□□ -1.57
SUPT16H-201ENST00000216297 TENM3Q9P273 2699 aa5.21□□□□□ -1.57
SUPT16H-201ENST00000216297 ZNF861PO60384 105 aa5.17□□□□□ -1.58
SUPT16H-201ENST00000216297 Q8N1X5 172 aa5.17□□□□□ -1.58
SUPT16H-201ENST00000216297 TENM1Q9UKZ4 2725 aa5.17□□□□□ -1.58
SUPT16H-201ENST00000216297 ROMO1P60602 79 aa5.17□□□□□ -1.58
SUPT16H-201ENST00000216297 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
SUPT16H-201ENST00000216297 IGLV7-43P04211 117 aa5.16□□□□□ -1.58
SUPT16H-201ENST00000216297 OTOGQ6ZRI0 2925 aa5.15□□□□□ -1.58
SUPT16H-201ENST00000216297 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.58
SUPT16H-201ENST00000216297 KRTAP1-5Q9BYS1 174 aa5.15□□□□□ -1.59
SUPT16H-201ENST00000216297 PSORS1C2Q9UIG4 136 aa5.14□□□□□ -1.59
SUPT16H-201ENST00000216297 WWC2-AS2Q96NR7 200 aa5.14□□□□□ -1.59
SUPT16H-201ENST00000216297 PANO1I0J062 215 aa5.13□□□□□ -1.59
SUPT16H-201ENST00000216297 SPACA4Q8TDM5 124 aa5.12□□□□□ -1.59
SUPT16H-201ENST00000216297 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.12□□□□□ -1.59
SUPT16H-201ENST00000216297 A0A0D9SG42 100 aa5.1□□□□□ -1.59
SUPT16H-201ENST00000216297 COL7A1Q02388 2944 aa5.1□□□□□ -1.59
SUPT16H-201ENST00000216297 A0A1B0GU33 70 aa5.09□□□□□ -1.59
SUPT16H-201ENST00000216297 J3QKU1 62 aa5.08□□□□□ -1.6
SUPT16H-201ENST00000216297 ZNF469Q96JG9 3925 aaPredicted RBP5.08□□□□□ -1.6
SUPT16H-201ENST00000216297 LY6G6CO95867 125 aa5.08□□□□□ -1.6
SUPT16H-201ENST00000216297 A8MUU9 505 aa5.06□□□□□ -1.6
SUPT16H-201ENST00000216297 LINC00483Q53H64 154 aa5.06□□□□□ -1.6
SUPT16H-201ENST00000216297 IGLV5-52A0A0A0MRZ9 124 aa5.06□□□□□ -1.6
SUPT16H-201ENST00000216297 KRTAP13-1Q8IUC0 172 aa5.06□□□□□ -1.6
SUPT16H-201ENST00000216297 TRRAPQ9Y4A5 3859 aa5.05□□□□□ -1.6
SUPT16H-201ENST00000216297 NBDYA0A0U1RRE5 68 aa5.05□□□□□ -1.6
SUPT16H-201ENST00000216297 TENM2Q9NT68 2774 aa5.05□□□□□ -1.6
SUPT16H-201ENST00000216297 LINC00304Q8N9R0 145 aa5.05□□□□□ -1.6
SUPT16H-201ENST00000216297 APLNQ9ULZ1 77 aa5.05□□□□□ -1.6
SUPT16H-201ENST00000216297 CSMD3Q7Z407 3707 aa5.03□□□□□ -1.61
SUPT16H-201ENST00000216297 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
SUPT16H-201ENST00000216297 TGP01266 2768 aa5.02□□□□□ -1.61
SUPT16H-201ENST00000216297 NDUFAF8A1L188 74 aa5.01□□□□□ -1.61
SUPT16H-201ENST00000216297 Q6ZSA8 131 aa5□□□□□ -1.61
SUPT16H-201ENST00000216297 H0YAA0 97 aa4.99□□□□□ -1.61
SUPT16H-201ENST00000216297 A0A0A0MQY5 61 aa4.97□□□□□ -1.61
SUPT16H-201ENST00000216297 A0A087WTM6 91 aa4.97□□□□□ -1.61
SUPT16H-201ENST00000216297 H1FX-AS1Q4G0G2 97 aa4.97□□□□□ -1.61
SUPT16H-201ENST00000216297 TYMSOSQ8TAI1 123 aa4.97□□□□□ -1.61
SUPT16H-201ENST00000216297 KRTAP24-1Q3LI83 254 aa4.96□□□□□ -1.62
SUPT16H-201ENST00000216297 TENM4Q6N022 2769 aa4.96□□□□□ -1.62
SUPT16H-201ENST00000216297 KRTAP16-1A8MUX0 517 aa4.93□□□□□ -1.62
SUPT16H-201ENST00000216297 P0C880 135 aa4.92□□□□□ -1.62
SUPT16H-201ENST00000216297 ANK3Q12955 4377 aaKnown RBP4.91□□□□□ -1.62
SUPT16H-201ENST00000216297 NUPR2A6NF83 97 aa4.91□□□□□ -1.62
SUPT16H-201ENST00000216297 C9orf92A6NGG3 77 aa4.9□□□□□ -1.62
SUPT16H-201ENST00000216297 RPL37P61927 97 aaKnown RBP4.87□□□□□ -1.63
SUPT16H-201ENST00000216297 C20orf166-AS1Q96NR2 134 aa4.87□□□□□ -1.63
SUPT16H-201ENST00000216297 C10orf95Q9H7T3 257 aa4.85□□□□□ -1.63
SUPT16H-201ENST00000216297 COX6B2Q6YFQ2 88 aa4.84□□□□□ -1.63
SUPT16H-201ENST00000216297 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.64
SUPT16H-201ENST00000216297 LUZP6Q538Z0 58 aa4.83□□□□□ -1.64
SUPT16H-201ENST00000216297 KRTAP13-2Q52LG2 175 aa4.81□□□□□ -1.64
SUPT16H-201ENST00000216297 DNAH10Q8IVF4 4471 aa4.79□□□□□ -1.64
SUPT16H-201ENST00000216297 J3QL48 77 aa4.79□□□□□ -1.64
SUPT16H-201ENST00000216297 FBN3Q75N90 2809 aa4.79□□□□□ -1.64
SUPT16H-201ENST00000216297 ALMS1Q8TCU4 4167 aa4.77□□□□□ -1.65
SUPT16H-201ENST00000216297 MEGF8Q7Z7M0 2845 aa4.75□□□□□ -1.65
SUPT16H-201ENST00000216297 TPRXLQ17RH7 258 aa4.74□□□□□ -1.65
SUPT16H-201ENST00000216297 KRTAP10-2P60368 255 aa4.68□□□□□ -1.66
SUPT16H-201ENST00000216297 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
SUPT16H-201ENST00000216297 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.66
SUPT16H-201ENST00000216297 S4R3F8 94 aa4.64□□□□□ -1.67
SUPT16H-201ENST00000216297 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
SUPT16H-201ENST00000216297 KRTAP10-1P60331 282 aa4.63□□□□□ -1.67
SUPT16H-201ENST00000216297 LYSTQ99698 3801 aa4.62□□□□□ -1.67
SUPT16H-201ENST00000216297 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
SUPT16H-201ENST00000216297 ANK2Q01484 3957 aa4.61□□□□□ -1.67
SUPT16H-201ENST00000216297 HUWE1Q7Z6Z7 4374 aaKnown RBP4.59□□□□□ -1.68
SUPT16H-201ENST00000216297 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
SUPT16H-201ENST00000216297 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
SUPT16H-201ENST00000216297 DNAH8Q96JB1 4490 aa4.57□□□□□ -1.68
SUPT16H-201ENST00000216297 FRAS1Q86XX4 4008 aa4.56□□□□□ -1.68
SUPT16H-201ENST00000216297 DNAH1Q9P2D7 4330 aa4.56□□□□□ -1.68
SUPT16H-201ENST00000216297 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
SUPT16H-201ENST00000216297 KRTAP10-6P60371 365 aaPredicted RBP4.52□□□□□ -1.69
SUPT16H-201ENST00000216297 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
SUPT16H-201ENST00000216297 DNAH17Q9UFH2 4485 aa4.5□□□□□ -1.69
SUPT16H-201ENST00000216297 RPS29P62273 56 aaKnown RBP4.48□□□□□ -1.69
SUPT16H-201ENST00000216297 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
SUPT16H-201ENST00000216297 PLECQ15149 4684 aaKnown RBP4.46□□□□□ -1.7
SUPT16H-201ENST00000216297 M0QZ58 72 aa4.45□□□□□ -1.7
SUPT16H-201ENST00000216297 KRTAP12-1P59990 96 aa4.44□□□□□ -1.7
SUPT16H-201ENST00000216297 R4GN34 69 aa4.43□□□□□ -1.7
SUPT16H-201ENST00000216297 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
SUPT16H-201ENST00000216297 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
SUPT16H-201ENST00000216297 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
SUPT16H-201ENST00000216297 XP32Q5T750 250 aa4.39□□□□□ -1.71
SUPT16H-201ENST00000216297 KRTAP3-3Q9BYR6 98 aa4.39□□□□□ -1.71
SUPT16H-201ENST00000216297 DNAH7Q8WXX0 4024 aa4.38□□□□□ -1.71
SUPT16H-201ENST00000216297 DNAH11Q96DT5 4516 aa4.37□□□□□ -1.71
SUPT16H-201ENST00000216297 DNAH3Q8TD57 4116 aa4.33□□□□□ -1.72
SUPT16H-201ENST00000216297 LRP1BQ9NZR2 4599 aa4.32□□□□□ -1.72
SUPT16H-201ENST00000216297 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms