RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 A0A087X002 238 aa6.8□□□□□ -1.32
PKP2-201ENST00000070846 CSMD2Q7Z408 3487 aa6.79□□□□□ -1.32
PKP2-201ENST00000070846 CYSTM1Q9H1C7 97 aa6.79□□□□□ -1.32
PKP2-201ENST00000070846 ZCCHC13Q8WW36 166 aaKnown RBP6.79□□□□□ -1.32
PKP2-201ENST00000070846 A0A0D9SG42 100 aa6.77□□□□□ -1.33
PKP2-201ENST00000070846 MMP24-AS1A0A0U1RRL7 71 aa6.77□□□□□ -1.33
PKP2-201ENST00000070846 SPINK7P58062 85 aa6.77□□□□□ -1.33
PKP2-201ENST00000070846 LINC00472Q9H8W2 130 aa6.77□□□□□ -1.33
PKP2-201ENST00000070846 H7BZZ5 65 aa6.76□□□□□ -1.33
PKP2-201ENST00000070846 SPINT4Q6UDR6 99 aa6.75□□□□□ -1.33
PKP2-201ENST00000070846 Q8N9P0 234 aaPredicted RBP6.75□□□□□ -1.33
PKP2-201ENST00000070846 OCR1Q9BZK8 76 aa6.75□□□□□ -1.33
PKP2-201ENST00000070846 HRES1P13985 223 aa6.74□□□□□ -1.33
PKP2-201ENST00000070846 KRTAP4-16G5E9R7 235 aaPredicted RBP6.73□□□□□ -1.33
PKP2-201ENST00000070846 KRTAP11-1Q8IUC1 163 aa6.72□□□□□ -1.33
PKP2-201ENST00000070846 CSAG1Q6PB30 78 aa6.71□□□□□ -1.34
PKP2-201ENST00000070846 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
PKP2-201ENST00000070846 LINC00483Q53H64 154 aa6.69□□□□□ -1.34
PKP2-201ENST00000070846 SPANXA2-OT1Q8N9U9 137 aa6.69□□□□□ -1.34
PKP2-201ENST00000070846 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
PKP2-201ENST00000070846 CUBNO60494 3623 aa6.68□□□□□ -1.34
PKP2-201ENST00000070846 VPS13CQ709C8 3753 aa6.66□□□□□ -1.34
PKP2-201ENST00000070846 Q5W150 140 aa6.66□□□□□ -1.34
PKP2-201ENST00000070846 CYP4F30PQ9H0H9 118 aa6.66□□□□□ -1.34
PKP2-201ENST00000070846 CAMK2N1Q7Z7J9 78 aa6.65□□□□□ -1.34
PKP2-201ENST00000070846 KRTAP7-1Q8IUC3 87 aa6.63□□□□□ -1.35
PKP2-201ENST00000070846 H3BS24 57 aa6.62□□□□□ -1.35
PKP2-201ENST00000070846 NBPF19A0A087WUL8 3843 aa6.62□□□□□ -1.35
PKP2-201ENST00000070846 CRIPTQ9P021 101 aa6.61□□□□□ -1.35
PKP2-201ENST00000070846 S4R3F8 94 aa6.6□□□□□ -1.35
PKP2-201ENST00000070846 A0A1B0GU33 70 aa6.57□□□□□ -1.36
PKP2-201ENST00000070846 R4GN34 69 aa6.56□□□□□ -1.36
PKP2-201ENST00000070846 KRTAP13-2Q52LG2 175 aa6.56□□□□□ -1.36
PKP2-201ENST00000070846 NOTCH2NLQ7Z3S9 236 aa6.54□□□□□ -1.36
PKP2-201ENST00000070846 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
PKP2-201ENST00000070846 KRTAP13-1Q8IUC0 172 aa6.49□□□□□ -1.37
PKP2-201ENST00000070846 RPS29P62273 56 aaKnown RBP6.46□□□□□ -1.38
PKP2-201ENST00000070846 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
PKP2-201ENST00000070846 ASB16-AS1Q495Z4 193 aa6.43□□□□□ -1.38
PKP2-201ENST00000070846 ZNF469Q96JG9 3925 aaPredicted RBP6.41□□□□□ -1.38
PKP2-201ENST00000070846 M0QZ58 72 aa6.41□□□□□ -1.38
PKP2-201ENST00000070846 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
PKP2-201ENST00000070846 COL7A1Q02388 2944 aa6.36□□□□□ -1.39
PKP2-201ENST00000070846 LCA10Q71F78 164 aa6.36□□□□□ -1.39
PKP2-201ENST00000070846 Q75L30 129 aa6.36□□□□□ -1.39
PKP2-201ENST00000070846 LINC01558Q9Y6Z2 57 aa6.35□□□□□ -1.39
PKP2-201ENST00000070846 RPL37P61927 97 aaKnown RBP6.35□□□□□ -1.39
PKP2-201ENST00000070846 FBN3Q75N90 2809 aa6.34□□□□□ -1.39
PKP2-201ENST00000070846 Q1T7F1 81 aa6.34□□□□□ -1.39
PKP2-201ENST00000070846 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
PKP2-201ENST00000070846 H1FX-AS1Q4G0G2 97 aa6.33□□□□□ -1.4
PKP2-201ENST00000070846 ADM2Q7Z4H4 148 aa6.33□□□□□ -1.4
PKP2-201ENST00000070846 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
PKP2-201ENST00000070846 A8MU10 97 aa6.31□□□□□ -1.4
PKP2-201ENST00000070846 PLAC4Q8WY50 150 aa6.28□□□□□ -1.4
PKP2-201ENST00000070846 KTN1-AS1Q86SY8 53 aa6.26□□□□□ -1.41
PKP2-201ENST00000070846 SPATA8Q6RVD6 105 aa6.23□□□□□ -1.41
PKP2-201ENST00000070846 A8MUU9 505 aa6.21□□□□□ -1.42
PKP2-201ENST00000070846 XP32Q5T750 250 aa6.2□□□□□ -1.42
PKP2-201ENST00000070846 Q5VV11 94 aa6.19□□□□□ -1.42
PKP2-201ENST00000070846 LUZP6Q538Z0 58 aa6.17□□□□□ -1.42
PKP2-201ENST00000070846 A0A1B0GVY2 172 aa6.17□□□□□ -1.42
PKP2-201ENST00000070846 TRRAPQ9Y4A5 3859 aa6.13□□□□□ -1.43
PKP2-201ENST00000070846 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
PKP2-201ENST00000070846 MEGF8Q7Z7M0 2845 aa6.12□□□□□ -1.43
PKP2-201ENST00000070846 AKAP9Q99996 3911 aa6.12□□□□□ -1.43
PKP2-201ENST00000070846 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
PKP2-201ENST00000070846 KRTAP10-8P60410 259 aa6.06□□□□□ -1.44
PKP2-201ENST00000070846 ANK3Q12955 4377 aaKnown RBP6.06□□□□□ -1.44
PKP2-201ENST00000070846 A0A0A0MQY5 61 aa6.05□□□□□ -1.44
PKP2-201ENST00000070846 ROMO1P60602 79 aa6.04□□□□□ -1.44
PKP2-201ENST00000070846 KRTAP13-3Q3SY46 172 aa6.04□□□□□ -1.44
PKP2-201ENST00000070846 A6NN06 94 aa6□□□□□ -1.45
PKP2-201ENST00000070846 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
PKP2-201ENST00000070846 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
PKP2-201ENST00000070846 TNP1P09430 55 aa5.85□□□□□ -1.47
PKP2-201ENST00000070846 P0C880 135 aa5.75□□□□□ -1.49
PKP2-201ENST00000070846 DNHD1Q96M86 4753 aa5.71□□□□□ -1.5
PKP2-201ENST00000070846 KRTAP4-5Q9BYR2 181 aa5.71□□□□□ -1.5
PKP2-201ENST00000070846 MT1HL1P0DM35 61 aa5.68□□□□□ -1.5
PKP2-201ENST00000070846 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
PKP2-201ENST00000070846 ANK2Q01484 3957 aa5.63□□□□□ -1.51
PKP2-201ENST00000070846 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
PKP2-201ENST00000070846 H0YAA0 97 aa5.61□□□□□ -1.51
PKP2-201ENST00000070846 CSMD3Q7Z407 3707 aa5.6□□□□□ -1.51
PKP2-201ENST00000070846 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
PKP2-201ENST00000070846 KRTAP10-4P60372 401 aaPredicted RBP5.51□□□□□ -1.53
PKP2-201ENST00000070846 PP632Q6XCG6 107 aa5.51□□□□□ -1.53
PKP2-201ENST00000070846 HUWE1Q7Z6Z7 4374 aaKnown RBP5.49□□□□□ -1.53
PKP2-201ENST00000070846 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
PKP2-201ENST00000070846 CMYA5Q8N3K9 4069 aa5.45□□□□□ -1.54
PKP2-201ENST00000070846 PRKDCP78527 4128 aaKnown RBP5.44□□□□□ -1.54
PKP2-201ENST00000070846 LYSTQ99698 3801 aa5.41□□□□□ -1.54
PKP2-201ENST00000070846 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
PKP2-201ENST00000070846 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
PKP2-201ENST00000070846 DNAH5Q8TE73 4624 aa5.35□□□□□ -1.55
PKP2-201ENST00000070846 KRTAP12-2P59991 146 aa5.35□□□□□ -1.55
PKP2-201ENST00000070846 PLECQ15149 4684 aaKnown RBP5.34□□□□□ -1.55
PKP2-201ENST00000070846 DNAH10Q8IVF4 4471 aa5.33□□□□□ -1.56
PKP2-201ENST00000070846 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 205.5 ms