RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Olfr975Q8VG91 310 aa5.5□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ighv1-26A0A075B5V0 117 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr1369-ps1A0A140T8K7 317 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 1700031F05RikB1AX30 191 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr263Q7TQT8 317 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 PifoQ9D9W1 207 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Zfp983E9PUT0 460 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rnf212F6TQD1 307 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Iglc2P01844 104 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 SbpP15501 199 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cd69P37217 199 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rnase9P60154 184 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm26558Q8BLW8 286 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr1370Q8VFG4 316 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Esm1Q9QYY7 184 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Sec11aQ9R0P6 179 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Trav3-4A0A075B654 114 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm28778A0A087WSK7 233 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 BC030500E9Q6W0 185 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr16Q62007 309 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Atp6v0bQ91V37 205 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tspan13Q9D8C2 204 aa5.49□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Vma21-psA0A140T8R2 101 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm15557A6PWY0 234 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr918E9PVZ7 325 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm21732J3QM79 361 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm21921J3QNB5 361 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cxcl1P12850 96 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 PlaurP35456 327 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Q0VG49 157 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Smrp1Q2MH31 260 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Mob4Q6PEB6 225 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Mrpl16Q99N93 251 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Pglyrp3A1A547 347 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm9767G3X930 207 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 MiaQ61865 130 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Slc25a47Q6IS41 310 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cd200r5Q8BTP3 270 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Atp6v0e1Q9CQD8 81 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Plpp2Q9DAX2 276 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 LitafQ9JLJ0 161 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Dkk2Q9QYZ8 259 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 IcosQ9WVS0 200 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ighv3-1A0A075B5S6 116 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Khdc1aQ3UWR2 166 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Khdc1cQ4KL78 166 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rbfox2Q8BP71 449 aaKnown RBP5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Vmn1r197Q8R265 298 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Mob3bQ8VE04 216 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ccl24Q9JKC0 119 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gdf15Q9Z0J7 303 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Rs1Q9Z1L4 224 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm45871A0A1B0GRI9 540 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 MymxQ2Q5T5 84 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm10447Q3UQ92 135 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Vdac1Q60932 296 aaKnown RBP5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cox7a2lQ61387 111 aa5.48□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ighv1-16A0A075B5U1 98 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 A630076J17RikJ3QQ32 107 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Csn3P06796 181 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 RprmlQ3URD2 117 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Jpt2Q6PGH2 190 aaKnown RBP5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr433Q7TRV9 314 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr1367Q8VFG2 316 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr491Q8VG06 310 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tmem189Q99LQ7 271 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Csmd2V9GX34 3611 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Trav13n-4A0A0G2JG01 110 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tmem238lA0A1B0GS74 79 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm6993A0A1W2P738 69 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm6793B2RXM2 351 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Mtatp8P03930 67 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 H2-DMb1P35737 261 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Timp3P39876 211 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cacng7P62956 275 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 H1fxQ80ZM5 188 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Gm9961Q8BNV2 113 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Vmn1r235Q8R297 328 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tmed6Q9CQG0 239 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ighv1-67A0A0G2JFN9 117 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Fam240bJ3QMB3 78 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 S100a4P07091 101 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tmem241Q3UME2 297 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Klk7Q91VE3 249 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Map1lc3aQ91VR7 121 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Bpifa5Q9CQX3 270 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Arpc1aQ9R0Q6 370 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 St6galnac3Q9WUV2 305 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Cldn10Q9Z0S6 231 aa5.47□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Ighv7-4A0A0A6YXL5 121 aa5.46□□□□□ -1.53
Bdnf-201ENSMUST00000053317 BC053393A0A0B4J1F6 192 aa5.46□□□□□ -1.53
Bdnf-201ENSMUST00000053317 CortP56469 109 aa5.46□□□□□ -1.53
Bdnf-201ENSMUST00000053317 OtosQ8R448 89 aa5.46□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Olfr1402Q8VET1 320 aa5.46□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Tmem100Q9CQG9 134 aa5.46□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Mfap4Q9D1H9 257 aa5.46□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Prr15Q9D1T5 122 aa5.46□□□□□ -1.53
Bdnf-201ENSMUST00000053317 Trbv31A0A075B5J5 111 aa5.46□□□□□ -1.54
Bdnf-201ENSMUST00000053317 Tcrg-V6A0A075B5Y8 134 aa5.46□□□□□ -1.54
Bdnf-201ENSMUST00000053317 Psg18B2RSG7 476 aa5.46□□□□□ -1.54
Retrieved 100 of 22,080 RNA–protein pairs in 72.6 ms