RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 Q5XG85 94 aa4.53□□□□□ -1.68
LINC00339-212ENST00000642072 HRCT1Q6UXD1 115 aa4.53□□□□□ -1.68
LINC00339-212ENST00000642072 COX6B2Q6YFQ2 88 aa4.53□□□□□ -1.68
LINC00339-212ENST00000642072 A0A1W2PPM0 123 aa4.52□□□□□ -1.69
LINC00339-212ENST00000642072 FXYD2P54710 66 aa4.52□□□□□ -1.69
LINC00339-212ENST00000642072 SOSTDC1Q6X4U4 206 aa4.52□□□□□ -1.69
LINC00339-212ENST00000642072 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
LINC00339-212ENST00000642072 H3BUT2 72 aa4.51□□□□□ -1.69
LINC00339-212ENST00000642072 FABP2P12104 132 aa4.51□□□□□ -1.69
LINC00339-212ENST00000642072 HERVK_113P61574 105 aa4.51□□□□□ -1.69
LINC00339-212ENST00000642072 CD164Q04900 197 aa4.51□□□□□ -1.69
LINC00339-212ENST00000642072 S100A7L2Q5SY68 101 aa4.51□□□□□ -1.69
LINC00339-212ENST00000642072 C1orf195Q5TG92 126 aa4.51□□□□□ -1.69
LINC00339-212ENST00000642072 TMEM238LA0A1B0GVL6 79 aa4.5□□□□□ -1.69
LINC00339-212ENST00000642072 A6NJY4 79 aa4.5□□□□□ -1.69
LINC00339-212ENST00000642072 K7ERU9 68 aa4.5□□□□□ -1.69
LINC00339-212ENST00000642072 LEPROTO15243 131 aa4.5□□□□□ -1.69
LINC00339-212ENST00000642072 OCIAD2Q56VL3 154 aa4.5□□□□□ -1.69
LINC00339-212ENST00000642072 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
LINC00339-212ENST00000642072 J3QQQ9 107 aa4.49□□□□□ -1.69
LINC00339-212ENST00000642072 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
LINC00339-212ENST00000642072 HIST1H4GQ99525 98 aa4.49□□□□□ -1.69
LINC00339-212ENST00000642072 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
LINC00339-212ENST00000642072 SPCS1Q9Y6A9 102 aa4.49□□□□□ -1.69
LINC00339-212ENST00000642072 ZNF815PA8K554 130 aa4.48□□□□□ -1.69
LINC00339-212ENST00000642072 H7C2G1 150 aa4.48□□□□□ -1.69
LINC00339-212ENST00000642072 NHP2Q9NX24 153 aaKnown RBP4.48□□□□□ -1.69
LINC00339-212ENST00000642072 LAMTOR3Q9UHA4 124 aa4.48□□□□□ -1.69
LINC00339-212ENST00000642072 LYRM7Q5U5X0 104 aa4.47□□□□□ -1.69
LINC00339-212ENST00000642072 SMIM29Q86T20 159 aa4.47□□□□□ -1.69
LINC00339-212ENST00000642072 RAB37Q96AX2 223 aa4.47□□□□□ -1.69
LINC00339-212ENST00000642072 DHRS4-AS1Q9P1J3 65 aa4.47□□□□□ -1.69
LINC00339-212ENST00000642072 F8W1H4 67 aa4.46□□□□□ -1.7
LINC00339-212ENST00000642072 ELOF1P60002 83 aaKnown RBP4.46□□□□□ -1.7
LINC00339-212ENST00000642072 NPC2P61916 151 aa4.46□□□□□ -1.7
LINC00339-212ENST00000642072 Q1RN00 199 aa4.46□□□□□ -1.7
LINC00339-212ENST00000642072 A0A0G2JQZ4 141 aa4.45□□□□□ -1.7
LINC00339-212ENST00000642072 A0A0J9YXY3 114 aa4.45□□□□□ -1.7
LINC00339-212ENST00000642072 CFC1P0CG37 223 aa4.45□□□□□ -1.7
LINC00339-212ENST00000642072 SCGB1D4Q6XE38 83 aa4.45□□□□□ -1.7
LINC00339-212ENST00000642072 LITAFQ99732 161 aa4.45□□□□□ -1.7
LINC00339-212ENST00000642072 K7ERJ3 54 aa4.44□□□□□ -1.7
LINC00339-212ENST00000642072 LGALS3P17931 250 aaKnown RBP4.44□□□□□ -1.7
LINC00339-212ENST00000642072 SPANXCQ9NY87 97 aa4.44□□□□□ -1.7
LINC00339-212ENST00000642072 IGLV5-48A0A075B6I7 105 aa4.43□□□□□ -1.7
LINC00339-212ENST00000642072 TRBV20-1A0A075B6N2 111 aa4.43□□□□□ -1.7
LINC00339-212ENST00000642072 A0A0B4J2C4 111 aa4.43□□□□□ -1.7
LINC00339-212ENST00000642072 TEX49A0A1B0GTD5 131 aa4.43□□□□□ -1.7
LINC00339-212ENST00000642072 J3QR89 54 aa4.43□□□□□ -1.7
LINC00339-212ENST00000642072 LINC00308Q8TCZ7 52 aa4.43□□□□□ -1.7
LINC00339-212ENST00000642072 NAA38Q9BRA0 125 aaKnown RBP4.43□□□□□ -1.7
LINC00339-212ENST00000642072 VPS25Q9BRG1 176 aa4.43□□□□□ -1.7
LINC00339-212ENST00000642072 PRO0461Q9UI25 63 aa4.43□□□□□ -1.7
LINC00339-212ENST00000642072 TIMM17BO60830 172 aa4.42□□□□□ -1.7
LINC00339-212ENST00000642072 COX7BP24311 80 aa4.42□□□□□ -1.7
LINC00339-212ENST00000642072 PCP4P48539 62 aa4.42□□□□□ -1.7
LINC00339-212ENST00000642072 C6orf99Q4VX62 202 aa4.42□□□□□ -1.7
LINC00339-212ENST00000642072 DEFB105AQ8NG35 78 aa4.42□□□□□ -1.7
LINC00339-212ENST00000642072 SPANXDQ9BXN6 97 aa4.42□□□□□ -1.7
LINC00339-212ENST00000642072 Q6Q795 121 aa4.41□□□□□ -1.7
LINC00339-212ENST00000642072 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
LINC00339-212ENST00000642072 OR13C6PQ8NH95 151 aa4.41□□□□□ -1.7
LINC00339-212ENST00000642072 H3BMG7 143 aa4.4□□□□□ -1.71
LINC00339-212ENST00000642072 LCE2BO14633 110 aa4.4□□□□□ -1.71
LINC00339-212ENST00000642072 MT2AP02795 61 aa4.4□□□□□ -1.71
LINC00339-212ENST00000642072 PRO1854Q9UHT4 67 aa4.4□□□□□ -1.71
LINC00339-212ENST00000642072 TRBV7-6A0A0J9YX20 115 aa4.39□□□□□ -1.71
LINC00339-212ENST00000642072 IFITM1P13164 125 aa4.39□□□□□ -1.71
LINC00339-212ENST00000642072 Q75L30 129 aa4.39□□□□□ -1.71
LINC00339-212ENST00000642072 A4D1N5 150 aa4.38□□□□□ -1.71
LINC00339-212ENST00000642072 SCGB1A1P11684 91 aa4.38□□□□□ -1.71
LINC00339-212ENST00000642072 TCL1BO95988 128 aa4.37□□□□□ -1.71
LINC00339-212ENST00000642072 MT1FP04733 61 aa4.37□□□□□ -1.71
LINC00339-212ENST00000642072 SMCPP49901 116 aaPredicted RBP4.37□□□□□ -1.71
LINC00339-212ENST00000642072 ETDBQ3ZM63 59 aa4.37□□□□□ -1.71
LINC00339-212ENST00000642072 ATP11AUNQ6ZP68 121 aa4.37□□□□□ -1.71
LINC00339-212ENST00000642072 MUSTN1Q8IVN3 82 aa4.37□□□□□ -1.71
LINC00339-212ENST00000642072 COPS9Q8WXC6 57 aa4.37□□□□□ -1.71
LINC00339-212ENST00000642072 TEN1Q86WV5 123 aa4.36□□□□□ -1.71
LINC00339-212ENST00000642072 OBSCN-AS1Q96MR7 158 aa4.36□□□□□ -1.71
LINC00339-212ENST00000642072 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
LINC00339-212ENST00000642072 PSMB2P49721 201 aa4.35□□□□□ -1.71
LINC00339-212ENST00000642072 ATXN8Q156A1 80 aa4.35□□□□□ -1.71
LINC00339-212ENST00000642072 PPDPFLQ8WWR9 84 aa4.35□□□□□ -1.71
LINC00339-212ENST00000642072 SIGMAR1Q99720 223 aa4.35□□□□□ -1.71
LINC00339-212ENST00000642072 SCGB1C2P0DMR2 95 aa4.34□□□□□ -1.71
LINC00339-212ENST00000642072 COX6CP09669 75 aa4.33□□□□□ -1.72
LINC00339-212ENST00000642072 TRBV7-7A0A0K0K1E9 115 aa4.32□□□□□ -1.72
LINC00339-212ENST00000642072 H3BT86 120 aa4.32□□□□□ -1.72
LINC00339-212ENST00000642072 ANKRD29Q8N6D5 301 aa4.32□□□□□ -1.72
LINC00339-212ENST00000642072 TRIAP1O43715 76 aa4.31□□□□□ -1.72
LINC00339-212ENST00000642072 C21orf62-AS1Q17RA5 79 aa4.31□□□□□ -1.72
LINC00339-212ENST00000642072 C20orf166-AS1Q96NR2 134 aa4.31□□□□□ -1.72
LINC00339-212ENST00000642072 A8MUU9 505 aa4.3□□□□□ -1.72
LINC00339-212ENST00000642072 C9JAW5 83 aa4.3□□□□□ -1.72
LINC00339-212ENST00000642072 LST1O00453 97 aa4.3□□□□□ -1.72
LINC00339-212ENST00000642072 IGFL1Q6UW32 110 aa4.3□□□□□ -1.72
LINC00339-212ENST00000642072 MTURNQ8N3F0 131 aa4.3□□□□□ -1.72
LINC00339-212ENST00000642072 CLEC2BQ92478 149 aa4.3□□□□□ -1.72
LINC00339-212ENST00000642072 NEBP20929 6669 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms