RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 LINC00476Q8WZB0 136 aa8.8□□□□□ -1
SCARB2-227ENST00000640957 IGKV2-24A0A0C4DH68 120 aa8.8□□□□□ -1
SCARB2-227ENST00000640957 Q5VV11 94 aa8.8□□□□□ -1
SCARB2-227ENST00000640957 KCNQ1DNQ9H478 68 aa8.8□□□□□ -1
SCARB2-227ENST00000640957 B9D2Q9BPU9 175 aa8.79□□□□□ -1
SCARB2-227ENST00000640957 PCOTHQ58A44 107 aa8.79□□□□□ -1
SCARB2-227ENST00000640957 MP68P56378 58 aa8.78□□□□□ -1
SCARB2-227ENST00000640957 A6NED7 52 aa8.76□□□□□ -1.01
SCARB2-227ENST00000640957 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
SCARB2-227ENST00000640957 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
SCARB2-227ENST00000640957 ANK2Q01484 3957 aa8.75□□□□□ -1.01
SCARB2-227ENST00000640957 H0Y9P7 68 aa8.75□□□□□ -1.01
SCARB2-227ENST00000640957 IGFL1Q6UW32 110 aa8.74□□□□□ -1.01
SCARB2-227ENST00000640957 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
SCARB2-227ENST00000640957 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
SCARB2-227ENST00000640957 TNP2Q05952 138 aa8.72□□□□□ -1.01
SCARB2-227ENST00000640957 LCE6AA0A183 80 aa8.72□□□□□ -1.01
SCARB2-227ENST00000640957 Q8N9P0 234 aaPredicted RBP8.71□□□□□ -1.01
SCARB2-227ENST00000640957 H0Y9J4 135 aa8.71□□□□□ -1.02
SCARB2-227ENST00000640957 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.02
SCARB2-227ENST00000640957 LCA10Q71F78 164 aa8.71□□□□□ -1.02
SCARB2-227ENST00000640957 UBE2AP49459 152 aa8.7□□□□□ -1.02
SCARB2-227ENST00000640957 CASC2Q6XLA1 102 aa8.69□□□□□ -1.02
SCARB2-227ENST00000640957 MRPL55Q7Z7F7 128 aaKnown RBP8.69□□□□□ -1.02
SCARB2-227ENST00000640957 SPRR4Q96PI1 79 aa8.69□□□□□ -1.02
SCARB2-227ENST00000640957 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
SCARB2-227ENST00000640957 CYP4F30PQ9H0H9 118 aa8.67□□□□□ -1.02
SCARB2-227ENST00000640957 UBE2DNLQ8IWF7 75 aa8.67□□□□□ -1.02
SCARB2-227ENST00000640957 RBM12B-AS1Q9P1G2 102 aa8.67□□□□□ -1.02
SCARB2-227ENST00000640957 DNAH10Q8IVF4 4471 aa8.66□□□□□ -1.02
SCARB2-227ENST00000640957 LYSTQ99698 3801 aa8.65□□□□□ -1.02
SCARB2-227ENST00000640957 NDUFB1O75438 58 aa8.65□□□□□ -1.03
SCARB2-227ENST00000640957 REG3GQ6UW15 175 aa8.65□□□□□ -1.03
SCARB2-227ENST00000640957 COA5Q86WW8 74 aa8.64□□□□□ -1.03
SCARB2-227ENST00000640957 LINC00588Q9Y4M8 146 aa8.64□□□□□ -1.03
SCARB2-227ENST00000640957 LINC01556Q5JQF7 62 aa8.63□□□□□ -1.03
SCARB2-227ENST00000640957 NDUFS5O43920 106 aa8.62□□□□□ -1.03
SCARB2-227ENST00000640957 CHTF8P0CG12 524 aa8.62□□□□□ -1.03
SCARB2-227ENST00000640957 CNBPP62633 177 aaKnown RBP8.62□□□□□ -1.03
SCARB2-227ENST00000640957 CD164Q04900 197 aa8.62□□□□□ -1.03
SCARB2-227ENST00000640957 SPRR1AP35321 89 aa8.58□□□□□ -1.04
SCARB2-227ENST00000640957 KTN1-AS1Q86SY8 53 aa8.58□□□□□ -1.04
SCARB2-227ENST00000640957 KRTAP11-1Q8IUC1 163 aa8.58□□□□□ -1.04
SCARB2-227ENST00000640957 LIMD2Q9BT23 127 aa8.57□□□□□ -1.04
SCARB2-227ENST00000640957 SPINK7P58062 85 aa8.56□□□□□ -1.04
SCARB2-227ENST00000640957 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
SCARB2-227ENST00000640957 PHF5AQ7RTV0 110 aaKnown RBP8.56□□□□□ -1.04
SCARB2-227ENST00000640957 H3BNG1 76 aa8.55□□□□□ -1.04
SCARB2-227ENST00000640957 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
SCARB2-227ENST00000640957 PRAC1Q96KF2 57 aa8.54□□□□□ -1.04
SCARB2-227ENST00000640957 K7EIL1 84 aa8.53□□□□□ -1.04
SCARB2-227ENST00000640957 DNAH10OSP0CZ25 163 aa8.52□□□□□ -1.05
SCARB2-227ENST00000640957 MOBPQ13875 183 aa8.5□□□□□ -1.05
SCARB2-227ENST00000640957 PRR26Q8N8Z3 221 aa8.5□□□□□ -1.05
SCARB2-227ENST00000640957 A0A1B0GW54 56 aa8.5□□□□□ -1.05
SCARB2-227ENST00000640957 C9orf163Q8N9P6 203 aa8.49□□□□□ -1.05
SCARB2-227ENST00000640957 TGP01266 2768 aa8.49□□□□□ -1.05
SCARB2-227ENST00000640957 IGHV6-1A0A0B4J1U7 121 aa8.49□□□□□ -1.05
SCARB2-227ENST00000640957 A8MWP4 228 aa8.49□□□□□ -1.05
SCARB2-227ENST00000640957 ADM2Q7Z4H4 148 aa8.49□□□□□ -1.05
SCARB2-227ENST00000640957 LOC101927531A0A1B0GV80 90 aa8.48□□□□□ -1.05
SCARB2-227ENST00000640957 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
SCARB2-227ENST00000640957 A6NN06 94 aa8.48□□□□□ -1.05
SCARB2-227ENST00000640957 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
SCARB2-227ENST00000640957 TLX1NBP0CAT3 122 aa8.46□□□□□ -1.05
SCARB2-227ENST00000640957 Q75L30 129 aa8.46□□□□□ -1.05
SCARB2-227ENST00000640957 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.06
SCARB2-227ENST00000640957 MMP24-AS1A0A0U1RRL7 71 aa8.45□□□□□ -1.06
SCARB2-227ENST00000640957 SPANXA2-OT1Q8N9U9 137 aa8.45□□□□□ -1.06
SCARB2-227ENST00000640957 RETNLBQ9BQ08 111 aa8.44□□□□□ -1.06
SCARB2-227ENST00000640957 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
SCARB2-227ENST00000640957 A0A087X002 238 aa8.43□□□□□ -1.06
SCARB2-227ENST00000640957 SPINK6Q6UWN8 80 aa8.43□□□□□ -1.06
SCARB2-227ENST00000640957 NOTCH2NLQ7Z3S9 236 aa8.43□□□□□ -1.06
SCARB2-227ENST00000640957 KRTAP1-5Q9BYS1 174 aa8.43□□□□□ -1.06
SCARB2-227ENST00000640957 CDC42SE1Q9NRR8 79 aa8.42□□□□□ -1.06
SCARB2-227ENST00000640957 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
SCARB2-227ENST00000640957 IGLV5-37A0A075B6J1 123 aa8.42□□□□□ -1.06
SCARB2-227ENST00000640957 HRES1P13985 223 aa8.42□□□□□ -1.06
SCARB2-227ENST00000640957 MDFIQ99750 246 aa8.4□□□□□ -1.06
SCARB2-227ENST00000640957 C7orf65Q6ZTY9 151 aa8.37□□□□□ -1.07
SCARB2-227ENST00000640957 PANO1I0J062 215 aa8.37□□□□□ -1.07
SCARB2-227ENST00000640957 LINC00313P59037 77 aa8.36□□□□□ -1.07
SCARB2-227ENST00000640957 DNAH9Q9NYC9 4486 aa8.35□□□□□ -1.07
SCARB2-227ENST00000640957 H3BPC8 53 aa8.34□□□□□ -1.07
SCARB2-227ENST00000640957 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
SCARB2-227ENST00000640957 IGLV8-61A0A075B6I0 122 aa8.32□□□□□ -1.08
SCARB2-227ENST00000640957 C8orf17Q9NRJ1 99 aa8.32□□□□□ -1.08
SCARB2-227ENST00000640957 CDK2AP2O75956 126 aa8.3□□□□□ -1.08
SCARB2-227ENST00000640957 FRAS1Q86XX4 4008 aa8.3□□□□□ -1.08
SCARB2-227ENST00000640957 Q5W150 140 aa8.29□□□□□ -1.08
SCARB2-227ENST00000640957 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
SCARB2-227ENST00000640957 Q96NJ1 140 aa8.28□□□□□ -1.08
SCARB2-227ENST00000640957 FLG2Q5D862 2391 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-227ENST00000640957 DNAH7Q8WXX0 4024 aa8.26□□□□□ -1.09
SCARB2-227ENST00000640957 DNAH1Q9P2D7 4330 aa8.26□□□□□ -1.09
SCARB2-227ENST00000640957 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
SCARB2-227ENST00000640957 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
SCARB2-227ENST00000640957 HUWE1Q7Z6Z7 4374 aaKnown RBP8.23□□□□□ -1.09
SCARB2-227ENST00000640957 APLNQ9ULZ1 77 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms