RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 SLC25A20O43772 301 aa5.42□□□□□ -1.54
SCARB2-225ENST00000640900 TCL1BO95988 128 aa5.42□□□□□ -1.54
SCARB2-225ENST00000640900 Q8N377 158 aa5.42□□□□□ -1.54
SCARB2-225ENST00000640900 ZNF706Q9Y5V0 76 aaPredicted RBP5.42□□□□□ -1.54
SCARB2-225ENST00000640900 TRBV20-1A0A075B6N2 111 aa5.41□□□□□ -1.54
SCARB2-225ENST00000640900 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
SCARB2-225ENST00000640900 SCGB1C2P0DMR2 95 aa5.41□□□□□ -1.54
SCARB2-225ENST00000640900 LYRM7Q5U5X0 104 aa5.41□□□□□ -1.54
SCARB2-225ENST00000640900 Q6ZQY7 126 aa5.41□□□□□ -1.54
SCARB2-225ENST00000640900 SMIM29Q86T20 159 aa5.41□□□□□ -1.54
SCARB2-225ENST00000640900 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
SCARB2-225ENST00000640900 PPDPFLQ8WWR9 84 aa5.41□□□□□ -1.54
SCARB2-225ENST00000640900 LINC01600Q96MT4 127 aa5.41□□□□□ -1.54
SCARB2-225ENST00000640900 KRTAP10-8P60410 259 aa5.4□□□□□ -1.54
SCARB2-225ENST00000640900 OCIAD2Q56VL3 154 aa5.4□□□□□ -1.54
SCARB2-225ENST00000640900 CDIP1Q9H305 208 aa5.4□□□□□ -1.54
SCARB2-225ENST00000640900 PCLOQ9Y6V0 5065 aa5.4□□□□□ -1.55
SCARB2-225ENST00000640900 A0A087X002 238 aa5.39□□□□□ -1.55
SCARB2-225ENST00000640900 TEX49A0A1B0GTD5 131 aa5.39□□□□□ -1.55
SCARB2-225ENST00000640900 FABP2P12104 132 aa5.39□□□□□ -1.55
SCARB2-225ENST00000640900 ATXN8Q156A1 80 aa5.39□□□□□ -1.55
SCARB2-225ENST00000640900 ANAPC11Q9NYG5 84 aa5.39□□□□□ -1.55
SCARB2-225ENST00000640900 SNCGO76070 127 aa5.38□□□□□ -1.55
SCARB2-225ENST00000640900 OXTP01178 125 aa5.38□□□□□ -1.55
SCARB2-225ENST00000640900 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
SCARB2-225ENST00000640900 C21orf62-AS1Q17RA5 79 aa5.38□□□□□ -1.55
SCARB2-225ENST00000640900 KRTAP13-2Q52LG2 175 aa5.38□□□□□ -1.55
SCARB2-225ENST00000640900 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
SCARB2-225ENST00000640900 IGLV8-61A0A075B6I0 122 aa5.37□□□□□ -1.55
SCARB2-225ENST00000640900 KRTAP29-1A8MX34 341 aaPredicted RBP5.37□□□□□ -1.55
SCARB2-225ENST00000640900 H3BQ85 93 aa5.37□□□□□ -1.55
SCARB2-225ENST00000640900 CRYGAP11844 174 aa5.36□□□□□ -1.55
SCARB2-225ENST00000640900 ORMDL1Q9P0S3 153 aa5.36□□□□□ -1.55
SCARB2-225ENST00000640900 SPCS1Q9Y6A9 102 aa5.36□□□□□ -1.55
SCARB2-225ENST00000640900 K7EP34 96 aa5.35□□□□□ -1.55
SCARB2-225ENST00000640900 DNAL4O96015 105 aa5.35□□□□□ -1.55
SCARB2-225ENST00000640900 UBE2V1Q13404 147 aa5.35□□□□□ -1.55
SCARB2-225ENST00000640900 PRR26Q8N8Z3 221 aa5.35□□□□□ -1.55
SCARB2-225ENST00000640900 DEFB105AQ8NG35 78 aa5.35□□□□□ -1.55
SCARB2-225ENST00000640900 PRO0461Q9UI25 63 aa5.35□□□□□ -1.55
SCARB2-225ENST00000640900 H3BMG7 143 aa5.34□□□□□ -1.55
SCARB2-225ENST00000640900 TMEM256-PLSCR3K7ERE1 68 aa5.34□□□□□ -1.55
SCARB2-225ENST00000640900 BAALC-AS2P0C853 105 aa5.34□□□□□ -1.55
SCARB2-225ENST00000640900 C3orf22Q8N5N4 141 aa5.34□□□□□ -1.55
SCARB2-225ENST00000640900 LAMTOR3Q9UHA4 124 aa5.34□□□□□ -1.55
SCARB2-225ENST00000640900 SSBP3-AS1Q7Z2R9 100 aa5.33□□□□□ -1.56
SCARB2-225ENST00000640900 C9JAW5 83 aa5.32□□□□□ -1.56
SCARB2-225ENST00000640900 H3BT86 120 aa5.32□□□□□ -1.56
SCARB2-225ENST00000640900 NDUFV3P56181 108 aaKnown RBP5.32□□□□□ -1.56
SCARB2-225ENST00000640900 OBSCN-AS1Q96MR7 158 aa5.32□□□□□ -1.56
SCARB2-225ENST00000640900 Q8NBF4 154 aa5.31□□□□□ -1.56
SCARB2-225ENST00000640900 DMBT1Q9UGM3 2413 aaPredicted RBP5.31□□□□□ -1.56
SCARB2-225ENST00000640900 MOBPQ13875 183 aa5.3□□□□□ -1.56
SCARB2-225ENST00000640900 GTF2H5Q6ZYL4 71 aa5.3□□□□□ -1.56
SCARB2-225ENST00000640900 IGLV9-49A0A0B4J1Y8 123 aa5.29□□□□□ -1.56
SCARB2-225ENST00000640900 Q6JHZ5 121 aa5.29□□□□□ -1.56
SCARB2-225ENST00000640900 ANKRD29Q8N6D5 301 aa5.29□□□□□ -1.56
SCARB2-225ENST00000640900 TYMSOSQ8TAI1 123 aa5.29□□□□□ -1.56
SCARB2-225ENST00000640900 TRBV7-4A0A0J9YYF1 115 aa5.28□□□□□ -1.56
SCARB2-225ENST00000640900 A0A1B0GV90 55 aa5.28□□□□□ -1.56
SCARB2-225ENST00000640900 CD164Q04900 197 aa5.28□□□□□ -1.56
SCARB2-225ENST00000640900 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
SCARB2-225ENST00000640900 F8W1H4 67 aa5.27□□□□□ -1.57
SCARB2-225ENST00000640900 HERC1Q15751 4861 aa5.27□□□□□ -1.57
SCARB2-225ENST00000640900 Q6Q795 121 aa5.27□□□□□ -1.57
SCARB2-225ENST00000640900 F8WEM9 126 aa5.26□□□□□ -1.57
SCARB2-225ENST00000640900 RPS29P62273 56 aaKnown RBP5.26□□□□□ -1.57
SCARB2-225ENST00000640900 SPAG11AQ6PDA7 123 aa5.26□□□□□ -1.57
SCARB2-225ENST00000640900 MTURNQ8N3F0 131 aa5.26□□□□□ -1.57
SCARB2-225ENST00000640900 JMJD7-PLA2G4BH0Y9G9 81 aa5.25□□□□□ -1.57
SCARB2-225ENST00000640900 C9orf153Q5TBE3 101 aa5.25□□□□□ -1.57
SCARB2-225ENST00000640900 Q5XG85 94 aa5.25□□□□□ -1.57
SCARB2-225ENST00000640900 LINC00304Q8N9R0 145 aa5.25□□□□□ -1.57
SCARB2-225ENST00000640900 LOC110117498A0A087WWA1 95 aa5.24□□□□□ -1.57
SCARB2-225ENST00000640900 A0A0G2JQZ4 141 aa5.24□□□□□ -1.57
SCARB2-225ENST00000640900 A0A1W2PNM2 257 aa5.24□□□□□ -1.57
SCARB2-225ENST00000640900 SPINK1P00995 79 aa5.24□□□□□ -1.57
SCARB2-225ENST00000640900 RBM3P98179 157 aaKnown RBP5.24□□□□□ -1.57
SCARB2-225ENST00000640900 PDE6GP18545 87 aa5.22□□□□□ -1.57
SCARB2-225ENST00000640900 Q6ZQT0 140 aa5.22□□□□□ -1.57
SCARB2-225ENST00000640900 TEN1Q86WV5 123 aa5.22□□□□□ -1.57
SCARB2-225ENST00000640900 TRBV7-7A0A0K0K1E9 115 aa5.21□□□□□ -1.58
SCARB2-225ENST00000640900 A0A1B0GW54 56 aa5.2□□□□□ -1.58
SCARB2-225ENST00000640900 ASB16-AS1Q495Z4 193 aa5.2□□□□□ -1.58
SCARB2-225ENST00000640900 DSCR8Q96T75 97 aa5.2□□□□□ -1.58
SCARB2-225ENST00000640900 ETDBQ3ZM63 59 aa5.19□□□□□ -1.58
SCARB2-225ENST00000640900 C14orf132Q9NPU4 83 aa5.19□□□□□ -1.58
SCARB2-225ENST00000640900 A0A1B0GV72 72 aa5.18□□□□□ -1.58
SCARB2-225ENST00000640900 CCKP06307 115 aa5.18□□□□□ -1.58
SCARB2-225ENST00000640900 KRTAP9-9Q9BYP9 154 aa5.18□□□□□ -1.58
SCARB2-225ENST00000640900 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
SCARB2-225ENST00000640900 HMCN2Q8NDA2 5059 aa5.17□□□□□ -1.58
SCARB2-225ENST00000640900 HRCT1Q6UXD1 115 aa5.16□□□□□ -1.58
SCARB2-225ENST00000640900 LIMD2Q9BT23 127 aa5.15□□□□□ -1.59
SCARB2-225ENST00000640900 A0A087WSZ3 146 aa5.14□□□□□ -1.59
SCARB2-225ENST00000640900 C1orf195Q5TG92 126 aa5.14□□□□□ -1.59
SCARB2-225ENST00000640900 Q96NJ1 140 aa5.14□□□□□ -1.59
SCARB2-225ENST00000640900 LINC00472Q9H8W2 130 aa5.13□□□□□ -1.59
SCARB2-225ENST00000640900 FP248Q71RG6 208 aaPredicted RBP5.12□□□□□ -1.59
SCARB2-225ENST00000640900 SS18L2Q9UHA2 77 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms