RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, human

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-223	ENST00000640640	PSORS1C2	Q9UIG4	136 aa		11.23	□□□□□ -0.61
SCARB2-223	ENST00000640640	SSBP3-AS1	Q7Z2R9	100 aa		11.23	□□□□□ -0.61
SCARB2-223	ENST00000640640	C4orf26	Q17RF5	130 aa		11.22	□□□□□ -0.61
SCARB2-223	ENST00000640640	ANAPC11	Q9NYG5	84 aa		11.22	□□□□□ -0.61
SCARB2-223	ENST00000640640	ZAN	Q9Y493	2812 aa		11.22	□□□□□ -0.61
SCARB2-223	ENST00000640640	C7orf65	Q6ZTY9	151 aa		11.21	□□□□□ -0.61
SCARB2-223	ENST00000640640	C8orf87	E5RJ46	101 aa		11.2	□□□□□ -0.62
SCARB2-223	ENST00000640640	ASH1L	Q9NR48	2969 aa	Known RBP	11.19	□□□□□ -0.62
SCARB2-223	ENST00000640640	LOC400499	M0QZD8	3231 aa		11.19	□□□□□ -0.62
SCARB2-223	ENST00000640640	C8orf17	Q9NRJ1	99 aa		11.19	□□□□□ -0.62
SCARB2-223	ENST00000640640		Q8NDZ9	215 aa		11.18	□□□□□ -0.62
SCARB2-223	ENST00000640640	LOC101927531	A0A1B0GV80	90 aa		11.18	□□□□□ -0.62
SCARB2-223	ENST00000640640	SPAG11A	Q6PDA7	123 aa		11.18	□□□□□ -0.62
SCARB2-223	ENST00000640640	SPRR4	Q96PI1	79 aa		11.18	□□□□□ -0.62
SCARB2-223	ENST00000640640	IGLV7-43	P04211	117 aa		11.16	□□□□□ -0.62
SCARB2-223	ENST00000640640		Q96NJ1	140 aa		11.16	□□□□□ -0.62
SCARB2-223	ENST00000640640		A0A1B0GVX0	72 aa		11.15	□□□□□ -0.62
SCARB2-223	ENST00000640640		H7BZZ5	65 aa		11.14	□□□□□ -0.63
SCARB2-223	ENST00000640640	STAB2	Q8WWQ8	2551 aa		11.14	□□□□□ -0.63
SCARB2-223	ENST00000640640	PRO0628	Q9UI54	55 aa		11.14	□□□□□ -0.63
SCARB2-223	ENST00000640640		A0A1B0GU69	56 aa		11.13	□□□□□ -0.63
SCARB2-223	ENST00000640640	APC	P25054	2843 aa		11.12	□□□□□ -0.63
SCARB2-223	ENST00000640640	HIVEP1	P15822	2718 aa		11.11	□□□□□ -0.63
SCARB2-223	ENST00000640640	DSCR10	P59022	87 aa		11.1	□□□□□ -0.63
SCARB2-223	ENST00000640640	USP34	Q70CQ2	3546 aa		11.09	□□□□□ -0.63
SCARB2-223	ENST00000640640	CELSR2	Q9HCU4	2923 aa		11.08	□□□□□ -0.64
SCARB2-223	ENST00000640640	NIPBL	Q6KC79	2804 aa	eCLIP	11.07	□□□□□ -0.64
SCARB2-223	ENST00000640640	SMR3B	P02814	79 aa	Predicted RBP	11.06	□□□□□ -0.64
SCARB2-223	ENST00000640640	TNP2	Q05952	138 aa		11.06	□□□□□ -0.64
SCARB2-223	ENST00000640640	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.05	□□□□□ -0.64
SCARB2-223	ENST00000640640	LINC00304	Q8N9R0	145 aa		11.05	□□□□□ -0.64
SCARB2-223	ENST00000640640	COA5	Q86WW8	74 aa		11.04	□□□□□ -0.64
SCARB2-223	ENST00000640640	SPRR1A	P35321	89 aa		11.02	□□□□□ -0.65
SCARB2-223	ENST00000640640	KRTAP26-1	Q6PEX3	210 aa		11.01	□□□□□ -0.65
SCARB2-223	ENST00000640640	MYO15A	Q9UKN7	3530 aa		10.99	□□□□□ -0.65
SCARB2-223	ENST00000640640		A8MUN3	132 aa		10.98	□□□□□ -0.65
SCARB2-223	ENST00000640640	OCR1	Q9BZK8	76 aa		10.98	□□□□□ -0.65
SCARB2-223	ENST00000640640	KRTAP1-5	Q9BYS1	174 aa		10.97	□□□□□ -0.65
SCARB2-223	ENST00000640640	HRNR	Q86YZ3	2850 aa	Predicted RBP	10.96	□□□□□ -0.65
SCARB2-223	ENST00000640640	ATP11AUN	Q6ZP68	121 aa		10.96	□□□□□ -0.65
SCARB2-223	ENST00000640640	LINC00336	Q6ZUF6	198 aa		10.96	□□□□□ -0.65
SCARB2-223	ENST00000640640	NF1	P21359	2839 aa		10.96	□□□□□ -0.66
SCARB2-223	ENST00000640640	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.94	□□□□□ -0.66
SCARB2-223	ENST00000640640	DCHS2	Q6V1P9	2916 aa		10.92	□□□□□ -0.66
SCARB2-223	ENST00000640640	IGLV8-61	A0A075B6I0	122 aa		10.91	□□□□□ -0.66
SCARB2-223	ENST00000640640	C9orf92	A6NGG3	77 aa		10.89	□□□□□ -0.67
SCARB2-223	ENST00000640640	FBN2	P35556	2912 aa		10.86	□□□□□ -0.67
SCARB2-223	ENST00000640640	CYP4F30P	Q9H0H9	118 aa		10.86	□□□□□ -0.67
SCARB2-223	ENST00000640640	CRYBG3	Q68DQ2	2970 aa		10.86	□□□□□ -0.67
SCARB2-223	ENST00000640640	PLAC8	Q9NZF1	115 aa		10.86	□□□□□ -0.67
SCARB2-223	ENST00000640640	SPANXA2-OT1	Q8N9U9	137 aa		10.85	□□□□□ -0.67
SCARB2-223	ENST00000640640	CD164	Q04900	197 aa		10.83	□□□□□ -0.68
SCARB2-223	ENST00000640640	SPRR1B	P22528	89 aa		10.81	□□□□□ -0.68
SCARB2-223	ENST00000640640	TENM4	Q6N022	2769 aa		10.79	□□□□□ -0.68
SCARB2-223	ENST00000640640	UQCR11	O14957	56 aa		10.77	□□□□□ -0.69
SCARB2-223	ENST00000640640		J3QL48	77 aa		10.73	□□□□□ -0.69
SCARB2-223	ENST00000640640	MMP24-AS1	A0A0U1RRL7	71 aa		10.73	□□□□□ -0.69
SCARB2-223	ENST00000640640	FAM229B	Q4G0N7	80 aa		10.73	□□□□□ -0.69
SCARB2-223	ENST00000640640	PRR26	Q8N8Z3	221 aa		10.73	□□□□□ -0.69
SCARB2-223	ENST00000640640	CYSTM1	Q9H1C7	97 aa		10.72	□□□□□ -0.69
SCARB2-223	ENST00000640640	LINC00472	Q9H8W2	130 aa		10.72	□□□□□ -0.69
SCARB2-223	ENST00000640640	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	10.7	□□□□□ -0.7
SCARB2-223	ENST00000640640		Q8N1X5	172 aa		10.67	□□□□□ -0.7
SCARB2-223	ENST00000640640	MXRA5	Q9NR99	2828 aa		10.66	□□□□□ -0.7
SCARB2-223	ENST00000640640	IGLV7-46	A0A075B6I9	117 aa		10.64	□□□□□ -0.71
SCARB2-223	ENST00000640640	PANO1	I0J062	215 aa		10.64	□□□□□ -0.71
SCARB2-223	ENST00000640640	MIR22HG	Q0VDD5	57 aa		10.63	□□□□□ -0.71
SCARB2-223	ENST00000640640	FLG2	Q5D862	2391 aa	Predicted RBP	10.62	□□□□□ -0.71
SCARB2-223	ENST00000640640	RELN	P78509	3460 aa		10.61	□□□□□ -0.71
SCARB2-223	ENST00000640640	HRES1	P13985	223 aa		10.58	□□□□□ -0.72
SCARB2-223	ENST00000640640	KRTAP10-2	P60368	255 aa		10.58	□□□□□ -0.72
SCARB2-223	ENST00000640640	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.58	□□□□□ -0.72
SCARB2-223	ENST00000640640	WDFY3	Q8IZQ1	3526 aa		10.58	□□□□□ -0.72
SCARB2-223	ENST00000640640		Q1T7F1	81 aa		10.56	□□□□□ -0.72
SCARB2-223	ENST00000640640		Q6ZR54	194 aa		10.56	□□□□□ -0.72
SCARB2-223	ENST00000640640	DCHS1	Q96JQ0	3298 aa		10.55	□□□□□ -0.72
SCARB2-223	ENST00000640640	KRTAP10-1	P60331	282 aa		10.55	□□□□□ -0.72
SCARB2-223	ENST00000640640		Q8N9P0	234 aa	Predicted RBP	10.54	□□□□□ -0.72
SCARB2-223	ENST00000640640	MUC3A	Q02505	3323 aa		10.54	□□□□□ -0.72
SCARB2-223	ENST00000640640	COX6B2	Q6YFQ2	88 aa		10.51	□□□□□ -0.73
SCARB2-223	ENST00000640640	LINC00483	Q53H64	154 aa		10.5	□□□□□ -0.73
SCARB2-223	ENST00000640640	FP248	Q71RG6	208 aa	Predicted RBP	10.47	□□□□□ -0.73
SCARB2-223	ENST00000640640	RBM12B-AS1	Q9P1G2	102 aa		10.47	□□□□□ -0.73
SCARB2-223	ENST00000640640	KRTAP7-1	Q8IUC3	87 aa		10.46	□□□□□ -0.73
SCARB2-223	ENST00000640640	CDC42SE1	Q9NRR8	79 aa		10.46	□□□□□ -0.74
SCARB2-223	ENST00000640640	ZCCHC13	Q8WW36	166 aa	Known RBP	10.46	□□□□□ -0.74
SCARB2-223	ENST00000640640		Q5W150	140 aa		10.45	□□□□□ -0.74
SCARB2-223	ENST00000640640	LAMA5	O15230	3695 aa		10.45	□□□□□ -0.74
SCARB2-223	ENST00000640640		Q6ZRN7	208 aa	Predicted RBP	10.45	□□□□□ -0.74
SCARB2-223	ENST00000640640	KRTAP11-1	Q8IUC1	163 aa		10.44	□□□□□ -0.74
SCARB2-223	ENST00000640640		Q5XG85	94 aa		10.44	□□□□□ -0.74
SCARB2-223	ENST00000640640	LCE6A	A0A183	80 aa		10.43	□□□□□ -0.74
SCARB2-223	ENST00000640640	ASPM	Q8IZT6	3477 aa		10.41	□□□□□ -0.74
SCARB2-223	ENST00000640640	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.39	□□□□□ -0.75
SCARB2-223	ENST00000640640		Q6ZSA8	131 aa		10.36	□□□□□ -0.75
SCARB2-223	ENST00000640640	LINC01558	Q9Y6Z2	57 aa		10.36	□□□□□ -0.75
SCARB2-223	ENST00000640640	OXT	P01178	125 aa		10.35	□□□□□ -0.75
SCARB2-223	ENST00000640640		A0A087X002	238 aa		10.35	□□□□□ -0.75
SCARB2-223	ENST00000640640		Q75L30	129 aa		10.35	□□□□□ -0.75
SCARB2-223	ENST00000640640	KTN1-AS1	Q86SY8	53 aa		10.34	□□□□□ -0.75

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