RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 CCDC179H3BU77 68 aa5.14□□□□□ -1.59
PNKP-231ENST00000640501 PANO1I0J062 215 aa5.14□□□□□ -1.59
PNKP-231ENST00000640501 TRAV7A0A075B6U4 112 aa5.13□□□□□ -1.59
PNKP-231ENST00000640501 ZNF861PO60384 105 aa5.13□□□□□ -1.59
PNKP-231ENST00000640501 SS18L2Q9UHA2 77 aa5.13□□□□□ -1.59
PNKP-231ENST00000640501 PSORS1C2Q9UIG4 136 aa5.13□□□□□ -1.59
PNKP-231ENST00000640501 DNAH7Q8WXX0 4024 aa5.13□□□□□ -1.59
PNKP-231ENST00000640501 LINC00483Q53H64 154 aa5.12□□□□□ -1.59
PNKP-231ENST00000640501 SCXQ7RTU7 201 aa5.12□□□□□ -1.59
PNKP-231ENST00000640501 KRTAP11-1Q8IUC1 163 aa5.12□□□□□ -1.59
PNKP-231ENST00000640501 FBN3Q75N90 2809 aa5.11□□□□□ -1.59
PNKP-231ENST00000640501 J3KT08 172 aa5.11□□□□□ -1.59
PNKP-231ENST00000640501 PRKDCP78527 4128 aaKnown RBP5.11□□□□□ -1.59
PNKP-231ENST00000640501 VPS13DQ5THJ4 4388 aa5.11□□□□□ -1.59
PNKP-231ENST00000640501 PLECQ15149 4684 aaKnown RBP5.11□□□□□ -1.59
PNKP-231ENST00000640501 A0A087WSZ3 146 aa5.1□□□□□ -1.59
PNKP-231ENST00000640501 IGKV4-1P06312 121 aa5.1□□□□□ -1.59
PNKP-231ENST00000640501 LYSTQ99698 3801 aa5.1□□□□□ -1.59
PNKP-231ENST00000640501 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
PNKP-231ENST00000640501 LINC00336Q6ZUF6 198 aa5.09□□□□□ -1.59
PNKP-231ENST00000640501 IGLV9-49A0A0B4J1Y8 123 aa5.08□□□□□ -1.6
PNKP-231ENST00000640501 NDUFB1O75438 58 aa5.08□□□□□ -1.6
PNKP-231ENST00000640501 NDUFC1O43677 76 aa5.07□□□□□ -1.6
PNKP-231ENST00000640501 TGP01266 2768 aa5.06□□□□□ -1.6
PNKP-231ENST00000640501 DNAH10Q8IVF4 4471 aa5.06□□□□□ -1.6
PNKP-231ENST00000640501 STARD9Q9P2P6 4700 aa5.06□□□□□ -1.6
PNKP-231ENST00000640501 TMEM258P61165 79 aa5.06□□□□□ -1.6
PNKP-231ENST00000640501 CIRBP-AS1Q8TBR5 109 aa5.06□□□□□ -1.6
PNKP-231ENST00000640501 HCG22E2RYF7 251 aa5.05□□□□□ -1.6
PNKP-231ENST00000640501 DSCR10P59022 87 aa5.05□□□□□ -1.6
PNKP-231ENST00000640501 KRTAP10-2P60368 255 aa5.05□□□□□ -1.6
PNKP-231ENST00000640501 Q6ZSA8 131 aa5.05□□□□□ -1.6
PNKP-231ENST00000640501 Q8N9L7 120 aa5.05□□□□□ -1.6
PNKP-231ENST00000640501 A8MWP4 228 aa5.04□□□□□ -1.6
PNKP-231ENST00000640501 K7EQZ3 153 aa5.04□□□□□ -1.6
PNKP-231ENST00000640501 CDK2AP2O75956 126 aa5.04□□□□□ -1.6
PNKP-231ENST00000640501 CD164Q04900 197 aa5.04□□□□□ -1.6
PNKP-231ENST00000640501 SSBP3-AS1Q7Z2R9 100 aa5.04□□□□□ -1.6
PNKP-231ENST00000640501 C20orf197Q8N268 126 aa5.04□□□□□ -1.6
PNKP-231ENST00000640501 LCE6AA0A183 80 aa5.03□□□□□ -1.6
PNKP-231ENST00000640501 KLKP1Q107X0 134 aa5.03□□□□□ -1.6
PNKP-231ENST00000640501 MOBPQ13875 183 aa5.03□□□□□ -1.6
PNKP-231ENST00000640501 FAM229BQ4G0N7 80 aa5.02□□□□□ -1.61
PNKP-231ENST00000640501 LINC00472Q9H8W2 130 aa5.02□□□□□ -1.61
PNKP-231ENST00000640501 ALMS1Q8TCU4 4167 aa5.02□□□□□ -1.61
PNKP-231ENST00000640501 DNHD1Q96M86 4753 aa5.01□□□□□ -1.61
PNKP-231ENST00000640501 ATP5EP56381 51 aaPredicted RBP5.01□□□□□ -1.61
PNKP-231ENST00000640501 C5orf47Q569G3 176 aa5.01□□□□□ -1.61
PNKP-231ENST00000640501 PRR15Q8IV56 129 aa5.01□□□□□ -1.61
PNKP-231ENST00000640501 OCR1Q9BZK8 76 aa5.01□□□□□ -1.61
PNKP-231ENST00000640501 A0A0G2JQZ4 141 aa5□□□□□ -1.61
PNKP-231ENST00000640501 KRTAP10-1P60331 282 aa5□□□□□ -1.61
PNKP-231ENST00000640501 TMEM254Q8TBM7 123 aa5□□□□□ -1.61
PNKP-231ENST00000640501 FAM30AQ9NZY2 134 aa5□□□□□ -1.61
PNKP-231ENST00000640501 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
PNKP-231ENST00000640501 CASC2Q6XLA1 102 aa4.99□□□□□ -1.61
PNKP-231ENST00000640501 MP68P56378 58 aa4.98□□□□□ -1.61
PNKP-231ENST00000640501 DEFB116Q30KQ4 102 aa4.98□□□□□ -1.61
PNKP-231ENST00000640501 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
PNKP-231ENST00000640501 LIMD2Q9BT23 127 aa4.97□□□□□ -1.61
PNKP-231ENST00000640501 DNAH17Q9UFH2 4485 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 FAM236DA0A1B0GTK5 79 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 H3BPC8 53 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 FAM236CP0DP71 79 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 RPS28P62857 69 aaKnown RBP4.96□□□□□ -1.62
PNKP-231ENST00000640501 ASB16-AS1Q495Z4 193 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 C4orf48Q5BLP8 95 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 WFDC13Q8IUB5 93 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 TP53AIP1Q9HCN2 124 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 DNAH2Q9P225 4427 aa4.96□□□□□ -1.62
PNKP-231ENST00000640501 SPINK6Q6UWN8 80 aa4.95□□□□□ -1.62
PNKP-231ENST00000640501 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
PNKP-231ENST00000640501 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
PNKP-231ENST00000640501 A0A0U1RQV1 116 aa4.94□□□□□ -1.62
PNKP-231ENST00000640501 A0A1B0GVX0 72 aa4.94□□□□□ -1.62
PNKP-231ENST00000640501 hDV103S1A0JD37 113 aa4.94□□□□□ -1.62
PNKP-231ENST00000640501 ANAPC11Q9NYG5 84 aa4.94□□□□□ -1.62
PNKP-231ENST00000640501 KRTAP29-1A8MX34 341 aaPredicted RBP4.93□□□□□ -1.62
PNKP-231ENST00000640501 H7BZZ5 65 aa4.93□□□□□ -1.62
PNKP-231ENST00000640501 SRRM2Q9UQ35 2752 aaKnown RBP4.93□□□□□ -1.62
PNKP-231ENST00000640501 C8orf87E5RJ46 101 aa4.92□□□□□ -1.62
PNKP-231ENST00000640501 Q5XG85 94 aa4.92□□□□□ -1.62
PNKP-231ENST00000640501 Q96NJ1 140 aa4.92□□□□□ -1.62
PNKP-231ENST00000640501 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
PNKP-231ENST00000640501 KMT2AQ03164 3969 aa4.91□□□□□ -1.62
PNKP-231ENST00000640501 IGHV6-1A0A0B4J1U7 121 aa4.91□□□□□ -1.62
PNKP-231ENST00000640501 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
PNKP-231ENST00000640501 PLA2G1BP04054 148 aaKnown RBP4.91□□□□□ -1.62
PNKP-231ENST00000640501 SPAG11AQ6PDA7 123 aa4.9□□□□□ -1.63
PNKP-231ENST00000640501 SERP1Q9Y6X1 66 aa4.9□□□□□ -1.63
PNKP-231ENST00000640501 TRAV22A0A0B4J277 110 aa4.89□□□□□ -1.63
PNKP-231ENST00000640501 H0Y9P7 68 aa4.89□□□□□ -1.63
PNKP-231ENST00000640501 SPINK1P00995 79 aa4.89□□□□□ -1.63
PNKP-231ENST00000640501 TYMSOSQ8TAI1 123 aa4.89□□□□□ -1.63
PNKP-231ENST00000640501 MRPL34Q9BQ48 92 aaKnown RBP4.89□□□□□ -1.63
PNKP-231ENST00000640501 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
PNKP-231ENST00000640501 A0A1B0GVY2 172 aa4.88□□□□□ -1.63
PNKP-231ENST00000640501 NDUFS5O43920 106 aa4.88□□□□□ -1.63
PNKP-231ENST00000640501 A0A087X002 238 aa4.87□□□□□ -1.63
PNKP-231ENST00000640501 RPS29P62273 56 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms