RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 IGLV7-46A0A075B6I9 117 aa5.41□□□□□ -1.54
SCARB2-214ENST00000638843 DEFB105AQ8NG35 78 aa5.41□□□□□ -1.54
SCARB2-214ENST00000638843 HIST1H4GQ99525 98 aa5.41□□□□□ -1.54
SCARB2-214ENST00000638843 SPATA45Q537H7 98 aa5.4□□□□□ -1.55
SCARB2-214ENST00000638843 C12orf57Q99622 126 aa5.4□□□□□ -1.55
SCARB2-214ENST00000638843 LINC01547P58512 204 aaPredicted RBP5.39□□□□□ -1.55
SCARB2-214ENST00000638843 TAL2Q16559 108 aa5.39□□□□□ -1.55
SCARB2-214ENST00000638843 VAMP8Q9BV40 100 aa5.39□□□□□ -1.55
SCARB2-214ENST00000638843 TEX49A0A1B0GTD5 131 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 TPRXLQ17RH7 258 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 Q1RN00 199 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 SLC25A34Q6PIV7 304 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 SMIM29Q86T20 159 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 Q8N377 158 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 LAMTOR3Q9UHA4 124 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 RPS29P62273 56 aaKnown RBP5.38□□□□□ -1.55
SCARB2-214ENST00000638843 C2orf91Q6ZV80 131 aa5.38□□□□□ -1.55
SCARB2-214ENST00000638843 MUC17Q685J3 4493 aa5.37□□□□□ -1.55
SCARB2-214ENST00000638843 PYY3Q5JQD4 70 aa5.37□□□□□ -1.55
SCARB2-214ENST00000638843 FP248Q71RG6 208 aaPredicted RBP5.37□□□□□ -1.55
SCARB2-214ENST00000638843 HIGD1BQ9P298 99 aa5.37□□□□□ -1.55
SCARB2-214ENST00000638843 VAMP3Q15836 100 aa5.36□□□□□ -1.55
SCARB2-214ENST00000638843 LINC00575Q6W349 94 aa5.36□□□□□ -1.55
SCARB2-214ENST00000638843 CFC1BP0CG36 223 aa5.35□□□□□ -1.55
SCARB2-214ENST00000638843 CFC1P0CG37 223 aa5.35□□□□□ -1.55
SCARB2-214ENST00000638843 HRCT1Q6UXD1 115 aa5.35□□□□□ -1.55
SCARB2-214ENST00000638843 NHP2Q9NX24 153 aaKnown RBP5.35□□□□□ -1.55
SCARB2-214ENST00000638843 SLC25A20O43772 301 aa5.34□□□□□ -1.55
SCARB2-214ENST00000638843 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
SCARB2-214ENST00000638843 H7C2G1 150 aa5.33□□□□□ -1.56
SCARB2-214ENST00000638843 KRTAP13-3Q3SY46 172 aa5.33□□□□□ -1.56
SCARB2-214ENST00000638843 hADV29S1A0JD25 119 aa5.33□□□□□ -1.56
SCARB2-214ENST00000638843 Q6ZQY7 126 aa5.33□□□□□ -1.56
SCARB2-214ENST00000638843 PRO1933Q9H354 126 aa5.33□□□□□ -1.56
SCARB2-214ENST00000638843 BVES-AS1Q5T3Y7 98 aa5.32□□□□□ -1.56
SCARB2-214ENST00000638843 CEND1Q8N111 149 aa5.32□□□□□ -1.56
SCARB2-214ENST00000638843 RAB37Q96AX2 223 aa5.32□□□□□ -1.56
SCARB2-214ENST00000638843 A0A0B4J2C4 111 aa5.31□□□□□ -1.56
SCARB2-214ENST00000638843 FXYD2P54710 66 aa5.3□□□□□ -1.56
SCARB2-214ENST00000638843 CD164Q04900 197 aa5.3□□□□□ -1.56
SCARB2-214ENST00000638843 FAT4Q6V0I7 4981 aa5.3□□□□□ -1.56
SCARB2-214ENST00000638843 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.29□□□□□ -1.56
SCARB2-214ENST00000638843 LIMD2Q9BT23 127 aa5.29□□□□□ -1.56
SCARB2-214ENST00000638843 FAM218AQ96MZ4 157 aa5.28□□□□□ -1.56
SCARB2-214ENST00000638843 PRO1854Q9UHT4 67 aa5.28□□□□□ -1.56
SCARB2-214ENST00000638843 F8WEM9 126 aa5.27□□□□□ -1.57
SCARB2-214ENST00000638843 IGLV8-61A0A075B6I0 122 aa5.26□□□□□ -1.57
SCARB2-214ENST00000638843 H0YGX0 51 aa5.26□□□□□ -1.57
SCARB2-214ENST00000638843 HSD52Q0P140 79 aa5.26□□□□□ -1.57
SCARB2-214ENST00000638843 Q5XG85 94 aa5.26□□□□□ -1.57
SCARB2-214ENST00000638843 OCIAD2Q56VL3 154 aa5.25□□□□□ -1.57
SCARB2-214ENST00000638843 UQCR10Q9UDW1 63 aa5.25□□□□□ -1.57
SCARB2-214ENST00000638843 K7ERJ3 54 aa5.25□□□□□ -1.57
SCARB2-214ENST00000638843 C1orf195Q5TG92 126 aa5.25□□□□□ -1.57
SCARB2-214ENST00000638843 TRIAP1O43715 76 aa5.24□□□□□ -1.57
SCARB2-214ENST00000638843 Q6JHZ5 121 aa5.24□□□□□ -1.57
SCARB2-214ENST00000638843 IGFL1Q6UW32 110 aa5.24□□□□□ -1.57
SCARB2-214ENST00000638843 PPDPFLQ8WWR9 84 aa5.24□□□□□ -1.57
SCARB2-214ENST00000638843 SNHG12Q9BXW3 62 aa5.24□□□□□ -1.57
SCARB2-214ENST00000638843 LOC105371267A0A1B0GV96 52 aa5.23□□□□□ -1.57
SCARB2-214ENST00000638843 H3BUT2 72 aa5.23□□□□□ -1.57
SCARB2-214ENST00000638843 ASB16-AS1Q495Z4 193 aa5.23□□□□□ -1.57
SCARB2-214ENST00000638843 CLEC2BQ92478 149 aa5.23□□□□□ -1.57
SCARB2-214ENST00000638843 SNCGO76070 127 aa5.22□□□□□ -1.57
SCARB2-214ENST00000638843 C9orf92A6NGG3 77 aa5.21□□□□□ -1.57
SCARB2-214ENST00000638843 TRBV7-7A0A0K0K1E9 115 aa5.21□□□□□ -1.58
SCARB2-214ENST00000638843 A0A1B0GX51 115 aa5.21□□□□□ -1.58
SCARB2-214ENST00000638843 TCL1BO95988 128 aa5.21□□□□□ -1.58
SCARB2-214ENST00000638843 NDUFV3P56181 108 aaKnown RBP5.2□□□□□ -1.58
SCARB2-214ENST00000638843 SEC61BP60468 96 aaKnown RBP5.2□□□□□ -1.58
SCARB2-214ENST00000638843 KRTAP4-1Q9BYQ7 146 aa5.2□□□□□ -1.58
SCARB2-214ENST00000638843 A0A0U1RQV1 116 aa5.18□□□□□ -1.58
SCARB2-214ENST00000638843 FABP2P12104 132 aa5.18□□□□□ -1.58
SCARB2-214ENST00000638843 PSMB2P49721 201 aa5.18□□□□□ -1.58
SCARB2-214ENST00000638843 H3BMG7 143 aa5.17□□□□□ -1.58
SCARB2-214ENST00000638843 COX6CP09669 75 aa5.16□□□□□ -1.58
SCARB2-214ENST00000638843 Q6Q795 121 aa5.16□□□□□ -1.58
SCARB2-214ENST00000638843 DNAL4O96015 105 aa5.15□□□□□ -1.59
SCARB2-214ENST00000638843 SMIM6P0DI80 62 aa5.15□□□□□ -1.59
SCARB2-214ENST00000638843 PCOTHQ58A44 107 aa5.14□□□□□ -1.59
SCARB2-214ENST00000638843 TEN1Q86WV5 123 aa5.14□□□□□ -1.59
SCARB2-214ENST00000638843 ORMDL1Q9P0S3 153 aa5.14□□□□□ -1.59
SCARB2-214ENST00000638843 SCGB1C2P0DMR2 95 aa5.13□□□□□ -1.59
SCARB2-214ENST00000638843 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
SCARB2-214ENST00000638843 A0A087WSZ3 146 aa5.12□□□□□ -1.59
SCARB2-214ENST00000638843 A0A1B0GV72 72 aa5.12□□□□□ -1.59
SCARB2-214ENST00000638843 A0A1W2PNM2 257 aa5.12□□□□□ -1.59
SCARB2-214ENST00000638843 LST1O00453 97 aa5.12□□□□□ -1.59
SCARB2-214ENST00000638843 TMEM256-PLSCR3K7ERE1 68 aa5.12□□□□□ -1.59
SCARB2-214ENST00000638843 TRACP01848 142 aa5.11□□□□□ -1.59
SCARB2-214ENST00000638843 SS18L2Q9UHA2 77 aa5.11□□□□□ -1.59
SCARB2-214ENST00000638843 H3BQ85 93 aa5.1□□□□□ -1.59
SCARB2-214ENST00000638843 M0R143 59 aa5.1□□□□□ -1.59
SCARB2-214ENST00000638843 RPL37P61927 97 aaKnown RBP5.1□□□□□ -1.59
SCARB2-214ENST00000638843 ANKRD29Q8N6D5 301 aa5.1□□□□□ -1.59
SCARB2-214ENST00000638843 OBSCN-AS1Q96MR7 158 aa5.1□□□□□ -1.59
SCARB2-214ENST00000638843 NAA38Q9BRA0 125 aaKnown RBP5.1□□□□□ -1.59
SCARB2-214ENST00000638843 UBE2V1Q13404 147 aa5.09□□□□□ -1.59
SCARB2-214ENST00000638843 Q96NJ1 140 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms