RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 S4R3F8 94 aa5.96□□□□□ -1.46
CACNA1A-242ENST00000637485 NDUFAF8A1L188 74 aa5.96□□□□□ -1.46
CACNA1A-242ENST00000637485 CR1P17927 2039 aa5.95□□□□□ -1.46
CACNA1A-242ENST00000637485 SPRR1AP35321 89 aa5.94□□□□□ -1.46
CACNA1A-242ENST00000637485 SPRR1BP22528 89 aa5.92□□□□□ -1.46
CACNA1A-242ENST00000637485 Q6ZR54 194 aa5.92□□□□□ -1.46
CACNA1A-242ENST00000637485 HTTP42858 3142 aa5.92□□□□□ -1.46
CACNA1A-242ENST00000637485 R4GN34 69 aa5.9□□□□□ -1.46
CACNA1A-242ENST00000637485 Q6ZSA8 131 aa5.9□□□□□ -1.46
CACNA1A-242ENST00000637485 FLNBO75369 2602 aaKnown RBP5.89□□□□□ -1.47
CACNA1A-242ENST00000637485 TRANK1O15050 2925 aa5.89□□□□□ -1.47
CACNA1A-242ENST00000637485 J3QL48 77 aa5.88□□□□□ -1.47
CACNA1A-242ENST00000637485 C5orf42Q9H799 3197 aa5.88□□□□□ -1.47
CACNA1A-242ENST00000637485 Q8NDZ9 215 aa5.86□□□□□ -1.47
CACNA1A-242ENST00000637485 KRTAP26-1Q6PEX3 210 aa5.86□□□□□ -1.47
CACNA1A-242ENST00000637485 ADM2Q7Z4H4 148 aa5.85□□□□□ -1.47
CACNA1A-242ENST00000637485 PCNTO95613 3336 aa5.85□□□□□ -1.47
CACNA1A-242ENST00000637485 KRTAP29-1A8MX34 341 aaPredicted RBP5.85□□□□□ -1.47
CACNA1A-242ENST00000637485 PLAC4Q8WY50 150 aa5.84□□□□□ -1.47
CACNA1A-242ENST00000637485 FLNAP21333 2647 aaKnown RBP5.84□□□□□ -1.48
CACNA1A-242ENST00000637485 HECTD1Q9ULT8 2610 aa5.83□□□□□ -1.48
CACNA1A-242ENST00000637485 USP24Q9UPU5 2620 aa5.82□□□□□ -1.48
CACNA1A-242ENST00000637485 LCE6AA0A183 80 aa5.81□□□□□ -1.48
CACNA1A-242ENST00000637485 SMR3BP02814 79 aaPredicted RBP5.81□□□□□ -1.48
CACNA1A-242ENST00000637485 PANO1I0J062 215 aa5.8□□□□□ -1.48
CACNA1A-242ENST00000637485 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
CACNA1A-242ENST00000637485 ITPR3Q14573 2671 aa5.79□□□□□ -1.48
CACNA1A-242ENST00000637485 M0QZ58 72 aa5.78□□□□□ -1.48
CACNA1A-242ENST00000637485 C20orf166-AS1Q96NR2 134 aa5.74□□□□□ -1.49
CACNA1A-242ENST00000637485 MGAM2Q2M2H8 2515 aa5.74□□□□□ -1.49
CACNA1A-242ENST00000637485 A8MU10 97 aa5.74□□□□□ -1.49
CACNA1A-242ENST00000637485 A8MUU9 505 aa5.73□□□□□ -1.49
CACNA1A-242ENST00000637485 ZNF292O60281 2723 aa5.72□□□□□ -1.49
CACNA1A-242ENST00000637485 HELZ2Q9BYK8 2649 aaKnown RBP5.72□□□□□ -1.49
CACNA1A-242ENST00000637485 BAHCC1Q9P281 2608 aa5.71□□□□□ -1.5
CACNA1A-242ENST00000637485 ATRQ13535 2644 aa5.7□□□□□ -1.5
CACNA1A-242ENST00000637485 KRTAP1-5Q9BYS1 174 aa5.69□□□□□ -1.5
CACNA1A-242ENST00000637485 RANBP2P49792 3224 aaKnown RBP5.68□□□□□ -1.5
CACNA1A-242ENST00000637485 KRTAP11-1Q8IUC1 163 aa5.68□□□□□ -1.5
CACNA1A-242ENST00000637485 CFAP46Q8IYW2 2715 aa5.66□□□□□ -1.5
CACNA1A-242ENST00000637485 KRTAP4-16G5E9R7 235 aaPredicted RBP5.64□□□□□ -1.51
CACNA1A-242ENST00000637485 M0R2T5 61 aa5.64□□□□□ -1.51
CACNA1A-242ENST00000637485 CFAP54Q96N23 3096 aa5.63□□□□□ -1.51
CACNA1A-242ENST00000637485 MKI67P46013 3256 aaKnown RBP5.63□□□□□ -1.51
CACNA1A-242ENST00000637485 MAST4O15021 2626 aa5.62□□□□□ -1.51
CACNA1A-242ENST00000637485 MGAQ8IWI9 3026 aa5.62□□□□□ -1.51
CACNA1A-242ENST00000637485 FLG2Q5D862 2391 aaPredicted RBP5.61□□□□□ -1.51
CACNA1A-242ENST00000637485 A0A0C4DFX4 3053 aa5.6□□□□□ -1.51
CACNA1A-242ENST00000637485 AKAP13Q12802 2813 aa5.6□□□□□ -1.51
CACNA1A-242ENST00000637485 LAMA3Q16787 3333 aa5.59□□□□□ -1.51
CACNA1A-242ENST00000637485 CENPEQ02224 2701 aa5.58□□□□□ -1.52
CACNA1A-242ENST00000637485 SETXQ7Z333 2677 aaKnown RBP5.57□□□□□ -1.52
CACNA1A-242ENST00000637485 C10orf95Q9H7T3 257 aa5.56□□□□□ -1.52
CACNA1A-242ENST00000637485 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
CACNA1A-242ENST00000637485 LAMA2P24043 3122 aaKnown RBP5.55□□□□□ -1.52
CACNA1A-242ENST00000637485 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
CACNA1A-242ENST00000637485 KRTAP10-2P60368 255 aa5.53□□□□□ -1.52
CACNA1A-242ENST00000637485 BRCA2P51587 3418 aa5.53□□□□□ -1.52
CACNA1A-242ENST00000637485 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
CACNA1A-242ENST00000637485 IGSF10Q6WRI0 2623 aa5.5□□□□□ -1.53
CACNA1A-242ENST00000637485 TNP1P09430 55 aa5.48□□□□□ -1.53
CACNA1A-242ENST00000637485 Q6ZRN7 208 aaPredicted RBP5.47□□□□□ -1.53
CACNA1A-242ENST00000637485 UNC79Q9P2D8 2635 aa5.47□□□□□ -1.53
CACNA1A-242ENST00000637485 P0C880 135 aa5.47□□□□□ -1.53
CACNA1A-242ENST00000637485 DMBT1Q9UGM3 2413 aaPredicted RBP5.47□□□□□ -1.53
CACNA1A-242ENST00000637485 Q5VSD8 79 aa5.47□□□□□ -1.53
CACNA1A-242ENST00000637485 WDFY4Q6ZS81 3184 aa5.45□□□□□ -1.54
CACNA1A-242ENST00000637485 CHD6Q8TD26 2715 aa5.45□□□□□ -1.54
CACNA1A-242ENST00000637485 FREM2Q5SZK8 3169 aa5.45□□□□□ -1.54
CACNA1A-242ENST00000637485 XIRP2A4UGR9 3374 aa5.44□□□□□ -1.54
CACNA1A-242ENST00000637485 KRTAP7-1Q8IUC3 87 aa5.44□□□□□ -1.54
CACNA1A-242ENST00000637485 RPS29P62273 56 aaKnown RBP5.44□□□□□ -1.54
CACNA1A-242ENST00000637485 GCN1Q92616 2671 aaKnown RBP5.43□□□□□ -1.54
CACNA1A-242ENST00000637485 DSPP15924 2871 aaKnown RBP5.42□□□□□ -1.54
CACNA1A-242ENST00000637485 PRUNE2Q8WUY3 3088 aa5.42□□□□□ -1.54
CACNA1A-242ENST00000637485 UNC80Q8N2C7 3258 aa5.42□□□□□ -1.54
CACNA1A-242ENST00000637485 TEX15Q9BXT5 2789 aa5.42□□□□□ -1.54
CACNA1A-242ENST00000637485 TRIOO75962 3097 aa5.41□□□□□ -1.54
CACNA1A-242ENST00000637485 MAP1AP78559 2803 aaPredicted RBP5.41□□□□□ -1.54
CACNA1A-242ENST00000637485 TEP1Q99973 2627 aaKnown RBP5.41□□□□□ -1.54
CACNA1A-242ENST00000637485 KRTAP13-1Q8IUC0 172 aa5.4□□□□□ -1.54
CACNA1A-242ENST00000637485 CDH23Q9H251 3354 aa5.39□□□□□ -1.55
CACNA1A-242ENST00000637485 STAB1Q9NY15 2570 aa5.37□□□□□ -1.55
CACNA1A-242ENST00000637485 COL6A5A8TX70 2615 aa5.36□□□□□ -1.55
CACNA1A-242ENST00000637485 VPS13AQ96RL7 3174 aa5.36□□□□□ -1.55
CACNA1A-242ENST00000637485 KMT2BQ9UMN6 2715 aaPredicted RBP5.35□□□□□ -1.55
CACNA1A-242ENST00000637485 FRYQ5TBA9 3013 aa5.35□□□□□ -1.55
CACNA1A-242ENST00000637485 H0YAA0 97 aa5.34□□□□□ -1.55
CACNA1A-242ENST00000637485 CELSR3Q9NYQ7 3312 aa5.32□□□□□ -1.56
CACNA1A-242ENST00000637485 NBEAL1Q6ZS30 2694 aa5.31□□□□□ -1.56
CACNA1A-242ENST00000637485 KRTAP21-3Q3LHN1 58 aa5.31□□□□□ -1.56
CACNA1A-242ENST00000637485 NOTCH1P46531 2555 aa5.31□□□□□ -1.56
CACNA1A-242ENST00000637485 NBEAL2Q6ZNJ1 2754 aa5.3□□□□□ -1.56
CACNA1A-242ENST00000637485 KRTAP13-2Q52LG2 175 aa5.3□□□□□ -1.56
CACNA1A-242ENST00000637485 ITPR2Q14571 2701 aa5.29□□□□□ -1.56
CACNA1A-242ENST00000637485 SZT2Q5T011 3432 aa5.29□□□□□ -1.56
CACNA1A-242ENST00000637485 NSD1Q96L73 2696 aaPredicted RBP5.26□□□□□ -1.57
CACNA1A-242ENST00000637485 LAMA1P25391 3075 aa5.26□□□□□ -1.57
CACNA1A-242ENST00000637485 UBR5O95071 2799 aaPredicted RBP5.26□□□□□ -1.57
CACNA1A-242ENST00000637485 KRTAP10-8P60410 259 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms