RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	TMEM223	A0PJW6	202 aa		4.23	□□□□□ -1.73
CACNA1A-222	ENST00000636022	COX7C	P15954	63 aa		4.23	□□□□□ -1.73
CACNA1A-222	ENST00000636022	TMEM258	P61165	79 aa		4.23	□□□□□ -1.73
CACNA1A-222	ENST00000636022	IGKV2D-26	A0A0A0MRZ7	120 aa		4.22	□□□□□ -1.73
CACNA1A-222	ENST00000636022	FAM236A	A0A1B0GUQ0	79 aa		4.22	□□□□□ -1.73
CACNA1A-222	ENST00000636022	FAM236B	A0A1B0GV22	79 aa		4.22	□□□□□ -1.73
CACNA1A-222	ENST00000636022	LINC00158	P58513	81 aa		4.22	□□□□□ -1.73
CACNA1A-222	ENST00000636022	ANKRD29	Q8N6D5	301 aa		4.22	□□□□□ -1.73
CACNA1A-222	ENST00000636022	IFI27L1	Q96BM0	104 aa		4.22	□□□□□ -1.73
CACNA1A-222	ENST00000636022	RETNLB	Q9BQ08	111 aa		4.22	□□□□□ -1.73
CACNA1A-222	ENST00000636022	MYMX	A0A1B0GTQ4	84 aa		4.21	□□□□□ -1.74
CACNA1A-222	ENST00000636022	SCGB1C2	P0DMR2	95 aa		4.21	□□□□□ -1.74
CACNA1A-222	ENST00000636022	GAGE2A	Q6NT46	116 aa		4.21	□□□□□ -1.74
CACNA1A-222	ENST00000636022	SPRR4	Q96PI1	79 aa		4.21	□□□□□ -1.74
CACNA1A-222	ENST00000636022		J3QQQ9	107 aa		4.2	□□□□□ -1.74
CACNA1A-222	ENST00000636022	SPRR1A	P35321	89 aa		4.2	□□□□□ -1.74
CACNA1A-222	ENST00000636022	HIST1H4A	P62805	103 aa	Known RBP	4.2	□□□□□ -1.74
CACNA1A-222	ENST00000636022	C1orf195	Q5TG92	126 aa		4.2	□□□□□ -1.74
CACNA1A-222	ENST00000636022	LYRM7	Q5U5X0	104 aa		4.2	□□□□□ -1.74
CACNA1A-222	ENST00000636022	HIGD2A	Q9BW72	106 aa		4.2	□□□□□ -1.74
CACNA1A-222	ENST00000636022	KCNQ1DN	Q9H478	68 aa		4.2	□□□□□ -1.74
CACNA1A-222	ENST00000636022	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.19	□□□□□ -1.74
CACNA1A-222	ENST00000636022	PRY	O14603	147 aa		4.19	□□□□□ -1.74
CACNA1A-222	ENST00000636022	TPRXL	Q17RH7	258 aa		4.19	□□□□□ -1.74
CACNA1A-222	ENST00000636022	MIR7-3HG	Q8N6C7	128 aa		4.19	□□□□□ -1.74
CACNA1A-222	ENST00000636022	LINC00337	Q8N6G1	96 aa		4.19	□□□□□ -1.74
CACNA1A-222	ENST00000636022	IGLV7-46	A0A075B6I9	117 aa		4.18	□□□□□ -1.74
CACNA1A-222	ENST00000636022		A0A0U1RQV1	116 aa		4.18	□□□□□ -1.74
CACNA1A-222	ENST00000636022	TCL1B	O95988	128 aa		4.18	□□□□□ -1.74
CACNA1A-222	ENST00000636022	TRAC	P01848	142 aa		4.18	□□□□□ -1.74
CACNA1A-222	ENST00000636022	TSPEAR-AS2	P59090	65 aa		4.18	□□□□□ -1.74
CACNA1A-222	ENST00000636022	LOC107984156	A0A0G2JMH3	177 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	NCR3	O14931	201 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	IGKC	P01834	107 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	PSMB2	P49721	201 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	SPAG11A	Q6PDA7	123 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	ARL17A	Q8IVW1	177 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	SMCR5	Q8TEV8	140 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	KRTAP4-9	Q9BYQ8	210 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	NDUFA12	Q9UI09	145 aa		4.17	□□□□□ -1.74
CACNA1A-222	ENST00000636022	TRBV10-3	A0A0K0K1G6	114 aa		4.16	□□□□□ -1.74
CACNA1A-222	ENST00000636022	FAM236D	A0A1B0GTK5	79 aa		4.16	□□□□□ -1.74
CACNA1A-222	ENST00000636022	SLC25A20	O43772	301 aa		4.16	□□□□□ -1.74
CACNA1A-222	ENST00000636022	DPM2	O94777	84 aa		4.16	□□□□□ -1.74
CACNA1A-222	ENST00000636022	FAM236C	P0DP71	79 aa		4.16	□□□□□ -1.74
CACNA1A-222	ENST00000636022	LINC00483	Q53H64	154 aa		4.16	□□□□□ -1.74
CACNA1A-222	ENST00000636022	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.16	□□□□□ -1.74
CACNA1A-222	ENST00000636022	ETDC	A0A1B0GVM5	59 aa		4.15	□□□□□ -1.75
CACNA1A-222	ENST00000636022	LEPROT	O15243	131 aa		4.15	□□□□□ -1.75
CACNA1A-222	ENST00000636022	DAND5	Q8N907	189 aa		4.15	□□□□□ -1.75
CACNA1A-222	ENST00000636022		Q8NBF4	154 aa		4.15	□□□□□ -1.75
CACNA1A-222	ENST00000636022	CYSTM1	Q9H1C7	97 aa		4.15	□□□□□ -1.75
CACNA1A-222	ENST00000636022	TRBV10-2	A0A0K0K1G8	114 aa		4.14	□□□□□ -1.75
CACNA1A-222	ENST00000636022	hADV29S1	A0JD25	119 aa		4.14	□□□□□ -1.75
CACNA1A-222	ENST00000636022	ERC2-IT1	O76042	136 aa		4.14	□□□□□ -1.75
CACNA1A-222	ENST00000636022	ACYP1	P07311	99 aa		4.14	□□□□□ -1.75
CACNA1A-222	ENST00000636022	PLN	P26678	52 aa		4.14	□□□□□ -1.75
CACNA1A-222	ENST00000636022	FP248	Q71RG6	208 aa	Predicted RBP	4.14	□□□□□ -1.75
CACNA1A-222	ENST00000636022	TTTY13	Q9BZ97	58 aa		4.14	□□□□□ -1.75
CACNA1A-222	ENST00000636022	ATOX1	O00244	68 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022	SPINK1	P00995	79 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022	IGLV6-57	P01721	117 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022	CD164	Q04900	197 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022	KRTAP13-3	Q3SY46	172 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022	LINC00643	Q86TS7	51 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022	DSCR8	Q96T75	97 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022	HIST1H4G	Q99525	98 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022		Q9BRP9	147 aa		4.13	□□□□□ -1.75
CACNA1A-222	ENST00000636022	NDUFC2	O95298	119 aa		4.12	□□□□□ -1.75
CACNA1A-222	ENST00000636022		Q6ZRX8	168 aa		4.12	□□□□□ -1.75
CACNA1A-222	ENST00000636022	SERP1	Q9Y6X1	66 aa		4.12	□□□□□ -1.75
CACNA1A-222	ENST00000636022	SMIM26	A0A096LP01	95 aa		4.11	□□□□□ -1.75
CACNA1A-222	ENST00000636022		H3BT86	120 aa		4.11	□□□□□ -1.75
CACNA1A-222	ENST00000636022	MOBP	Q13875	183 aa		4.11	□□□□□ -1.75
CACNA1A-222	ENST00000636022	ADAMTSL4-AS1	Q5T5F5	129 aa		4.11	□□□□□ -1.75
CACNA1A-222	ENST00000636022	SOSTDC1	Q6X4U4	206 aa		4.11	□□□□□ -1.75
CACNA1A-222	ENST00000636022	SSBP3-AS1	Q7Z2R9	100 aa		4.11	□□□□□ -1.75
CACNA1A-222	ENST00000636022	IGLV9-49	A0A0B4J1Y8	123 aa		4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022		A0A0J9YXY3	114 aa		4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022	LGALS3	P17931	250 aa	Known RBP	4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022	HERVK_113	P61574	105 aa		4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022	RPS29	P62273	56 aa	Known RBP	4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022	ASB16-AS1	Q495Z4	193 aa		4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022		Q8N377	158 aa		4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022	SERP2	Q8N6R1	65 aa		4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022	KRTAP4-2	Q9BYR5	136 aa		4.1	□□□□□ -1.75
CACNA1A-222	ENST00000636022	TRAV23DV6	A0A075B6W5	121 aa		4.09	□□□□□ -1.75
CACNA1A-222	ENST00000636022	ZNF73	O43830	326 aa	Predicted RBP	4.09	□□□□□ -1.75
CACNA1A-222	ENST00000636022	CFC1B	P0CG36	223 aa		4.09	□□□□□ -1.75
CACNA1A-222	ENST00000636022	CFC1	P0CG37	223 aa		4.09	□□□□□ -1.75
CACNA1A-222	ENST00000636022	PMAIP1	Q13794	54 aa		4.09	□□□□□ -1.75
CACNA1A-222	ENST00000636022	S100A7L2	Q5SY68	101 aa		4.09	□□□□□ -1.75
CACNA1A-222	ENST00000636022	FSIP2	Q5CZC0	6907 aa		4.09	□□□□□ -1.75
CACNA1A-222	ENST00000636022	TEX49	A0A1B0GTD5	131 aa		4.08	□□□□□ -1.76
CACNA1A-222	ENST00000636022	ATXN8	Q156A1	80 aa		4.08	□□□□□ -1.76
CACNA1A-222	ENST00000636022	ST20-AS1	Q8NBB2	130 aa		4.08	□□□□□ -1.76
CACNA1A-222	ENST00000636022	LITAF	Q99732	161 aa		4.08	□□□□□ -1.76
CACNA1A-222	ENST00000636022	KRTAP4-1	Q9BYQ7	146 aa		4.08	□□□□□ -1.76
CACNA1A-222	ENST00000636022	PRO1854	Q9UHT4	67 aa		4.08	□□□□□ -1.76
CACNA1A-222	ENST00000636022		A0A0B4J2C4	111 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms