RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 KRTAP16-1A8MUX0 517 aa5.97□□□□□ -1.45
SPTAN1-228ENST00000635853 H1FX-AS1Q4G0G2 97 aa5.97□□□□□ -1.45
SPTAN1-228ENST00000635853 M0QZ58 72 aa5.97□□□□□ -1.45
SPTAN1-228ENST00000635853 KRTAP1-1Q07627 177 aa5.97□□□□□ -1.45
SPTAN1-228ENST00000635853 KRTAP26-1Q6PEX3 210 aa5.97□□□□□ -1.45
SPTAN1-228ENST00000635853 SPRR1BP22528 89 aa5.96□□□□□ -1.45
SPTAN1-228ENST00000635853 POLQO75417 2590 aa5.96□□□□□ -1.46
SPTAN1-228ENST00000635853 LAMA2P24043 3122 aaKnown RBP5.95□□□□□ -1.46
SPTAN1-228ENST00000635853 MTORP42345 2549 aa5.95□□□□□ -1.46
SPTAN1-228ENST00000635853 Q5W150 140 aa5.93□□□□□ -1.46
SPTAN1-228ENST00000635853 KRTAP4-16G5E9R7 235 aaPredicted RBP5.92□□□□□ -1.46
SPTAN1-228ENST00000635853 ROMO1P60602 79 aa5.91□□□□□ -1.46
SPTAN1-228ENST00000635853 SETD2Q9BYW2 2564 aaPredicted RBP5.91□□□□□ -1.46
SPTAN1-228ENST00000635853 A0A0C4DFX4 3053 aa5.9□□□□□ -1.46
SPTAN1-228ENST00000635853 USP9YO00507 2555 aaPredicted RBP5.9□□□□□ -1.47
SPTAN1-228ENST00000635853 F8P00451 2351 aa5.89□□□□□ -1.47
SPTAN1-228ENST00000635853 FLNBO75369 2602 aaKnown RBP5.88□□□□□ -1.47
SPTAN1-228ENST00000635853 DNAH12Q6ZR08 3092 aa5.88□□□□□ -1.47
SPTAN1-228ENST00000635853 EPG5Q9HCE0 2579 aa5.87□□□□□ -1.47
SPTAN1-228ENST00000635853 CR1P17927 2039 aa5.87□□□□□ -1.47
SPTAN1-228ENST00000635853 SZT2Q5T011 3432 aa5.85□□□□□ -1.47
SPTAN1-228ENST00000635853 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
SPTAN1-228ENST00000635853 LAMA3Q16787 3333 aa5.85□□□□□ -1.47
SPTAN1-228ENST00000635853 PKD1L2Q7Z442 2459 aa5.85□□□□□ -1.47
SPTAN1-228ENST00000635853 KRTAP10-1P60331 282 aa5.84□□□□□ -1.47
SPTAN1-228ENST00000635853 VCANP13611 3396 aa5.84□□□□□ -1.47
SPTAN1-228ENST00000635853 EYSQ5T1H1 3165 aa5.84□□□□□ -1.47
SPTAN1-228ENST00000635853 HTTP42858 3142 aa5.82□□□□□ -1.48
SPTAN1-228ENST00000635853 ACANP16112 2415 aa5.81□□□□□ -1.48
SPTAN1-228ENST00000635853 KRTAP10-2P60368 255 aa5.8□□□□□ -1.48
SPTAN1-228ENST00000635853 RANBP2P49792 3224 aaKnown RBP5.8□□□□□ -1.48
SPTAN1-228ENST00000635853 ANKRD17O75179 2603 aaKnown RBP5.79□□□□□ -1.48
SPTAN1-228ENST00000635853 MUC3AQ02505 3323 aa5.79□□□□□ -1.48
SPTAN1-228ENST00000635853 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
SPTAN1-228ENST00000635853 A8MUU9 505 aa5.75□□□□□ -1.49
SPTAN1-228ENST00000635853 PANO1I0J062 215 aa5.75□□□□□ -1.49
SPTAN1-228ENST00000635853 HECTD1Q9ULT8 2610 aa5.74□□□□□ -1.49
SPTAN1-228ENST00000635853 COL6A3P12111 3177 aa5.74□□□□□ -1.49
SPTAN1-228ENST00000635853 TNRC18O15417 2968 aaPredicted RBP5.72□□□□□ -1.49
SPTAN1-228ENST00000635853 C20orf166-AS1Q96NR2 134 aa5.72□□□□□ -1.49
SPTAN1-228ENST00000635853 KRTAP1-5Q9BYS1 174 aa5.72□□□□□ -1.49
SPTAN1-228ENST00000635853 CDH23Q9H251 3354 aa5.7□□□□□ -1.5
SPTAN1-228ENST00000635853 UNC80Q8N2C7 3258 aa5.69□□□□□ -1.5
SPTAN1-228ENST00000635853 PRUNE2Q8WUY3 3088 aa5.69□□□□□ -1.5
SPTAN1-228ENST00000635853 MGAM2Q2M2H8 2515 aa5.68□□□□□ -1.5
SPTAN1-228ENST00000635853 NOTCH2NLQ7Z3S9 236 aa5.68□□□□□ -1.5
SPTAN1-228ENST00000635853 KRTAP11-1Q8IUC1 163 aa5.64□□□□□ -1.51
SPTAN1-228ENST00000635853 KRTAP7-1Q8IUC3 87 aa5.64□□□□□ -1.51
SPTAN1-228ENST00000635853 USP24Q9UPU5 2620 aa5.61□□□□□ -1.51
SPTAN1-228ENST00000635853 XIRP2A4UGR9 3374 aa5.59□□□□□ -1.51
SPTAN1-228ENST00000635853 MAST4O15021 2626 aa5.58□□□□□ -1.52
SPTAN1-228ENST00000635853 REV3LO60673 3130 aa5.58□□□□□ -1.52
SPTAN1-228ENST00000635853 SPTBN5Q9NRC6 3674 aaKnown RBP5.56□□□□□ -1.52
SPTAN1-228ENST00000635853 ATRQ13535 2644 aa5.55□□□□□ -1.52
SPTAN1-228ENST00000635853 C5orf42Q9H799 3197 aa5.55□□□□□ -1.52
SPTAN1-228ENST00000635853 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
SPTAN1-228ENST00000635853 TNP1P09430 55 aa5.53□□□□□ -1.52
SPTAN1-228ENST00000635853 HELZ2Q9BYK8 2649 aaKnown RBP5.52□□□□□ -1.53
SPTAN1-228ENST00000635853 KRTAP13-1Q8IUC0 172 aa5.5□□□□□ -1.53
SPTAN1-228ENST00000635853 H0YAA0 97 aa5.5□□□□□ -1.53
SPTAN1-228ENST00000635853 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
SPTAN1-228ENST00000635853 CHD7Q9P2D1 2997 aa5.48□□□□□ -1.53
SPTAN1-228ENST00000635853 WDFY4Q6ZS81 3184 aa5.47□□□□□ -1.53
SPTAN1-228ENST00000635853 DNAH14Q0VDD8 3507 aa5.45□□□□□ -1.54
SPTAN1-228ENST00000635853 TRIOO75962 3097 aa5.44□□□□□ -1.54
SPTAN1-228ENST00000635853 SETXQ7Z333 2677 aaKnown RBP5.44□□□□□ -1.54
SPTAN1-228ENST00000635853 DMDP11532 3685 aa5.42□□□□□ -1.54
SPTAN1-228ENST00000635853 CHD9Q3L8U1 2897 aa5.42□□□□□ -1.54
SPTAN1-228ENST00000635853 KRTAP10-8P60410 259 aa5.42□□□□□ -1.54
SPTAN1-228ENST00000635853 A0A1B0GVY2 172 aa5.4□□□□□ -1.55
SPTAN1-228ENST00000635853 VPS13AQ96RL7 3174 aa5.39□□□□□ -1.55
SPTAN1-228ENST00000635853 FLNAP21333 2647 aaKnown RBP5.39□□□□□ -1.55
SPTAN1-228ENST00000635853 STAB1Q9NY15 2570 aa5.39□□□□□ -1.55
SPTAN1-228ENST00000635853 MYO15AQ9UKN7 3530 aa5.38□□□□□ -1.55
SPTAN1-228ENST00000635853 KRTAP13-2Q52LG2 175 aa5.37□□□□□ -1.55
SPTAN1-228ENST00000635853 USP34Q70CQ2 3546 aa5.37□□□□□ -1.55
SPTAN1-228ENST00000635853 ITPR3Q14573 2671 aa5.37□□□□□ -1.55
SPTAN1-228ENST00000635853 KRTAP13-3Q3SY46 172 aa5.35□□□□□ -1.55
SPTAN1-228ENST00000635853 Q6ZRN7 208 aaPredicted RBP5.35□□□□□ -1.55
SPTAN1-228ENST00000635853 WDFY3Q8IZQ1 3526 aa5.35□□□□□ -1.55
SPTAN1-228ENST00000635853 CFAP46Q8IYW2 2715 aa5.34□□□□□ -1.55
SPTAN1-228ENST00000635853 FRYLO94915 3013 aa5.34□□□□□ -1.55
SPTAN1-228ENST00000635853 P0C880 135 aa5.34□□□□□ -1.56
SPTAN1-228ENST00000635853 TRANK1O15050 2925 aa5.33□□□□□ -1.56
SPTAN1-228ENST00000635853 CFAP54Q96N23 3096 aa5.32□□□□□ -1.56
SPTAN1-228ENST00000635853 PRRC2CQ9Y520 2896 aaKnown RBP5.31□□□□□ -1.56
SPTAN1-228ENST00000635853 BAHCC1Q9P281 2608 aa5.29□□□□□ -1.56
SPTAN1-228ENST00000635853 TEP1Q99973 2627 aaKnown RBP5.29□□□□□ -1.56
SPTAN1-228ENST00000635853 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
SPTAN1-228ENST00000635853 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
SPTAN1-228ENST00000635853 KRTAP21-3Q3LHN1 58 aa5.28□□□□□ -1.56
SPTAN1-228ENST00000635853 SPEGQ15772 3267 aa5.27□□□□□ -1.57
SPTAN1-228ENST00000635853 ZZEF1O43149 2961 aa5.26□□□□□ -1.57
SPTAN1-228ENST00000635853 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
SPTAN1-228ENST00000635853 DCHS1Q96JQ0 3298 aa5.24□□□□□ -1.57
SPTAN1-228ENST00000635853 ASPMQ8IZT6 3477 aa5.22□□□□□ -1.57
SPTAN1-228ENST00000635853 XP32Q5T750 250 aa5.21□□□□□ -1.58
SPTAN1-228ENST00000635853 TPRXLQ17RH7 258 aa5.19□□□□□ -1.58
SPTAN1-228ENST00000635853 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
SPTAN1-228ENST00000635853 NBEAQ8NFP9 2946 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms