RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 Q1RN00 199 aa10.2□□□□□ -0.78
CLN6-210ENST00000635747 RAB37Q96AX2 223 aa10.2□□□□□ -0.78
CLN6-210ENST00000635747 M0R143 59 aa10.19□□□□□ -0.78
CLN6-210ENST00000635747 ASB16-AS1Q495Z4 193 aa10.18□□□□□ -0.78
CLN6-210ENST00000635747 BVES-AS1Q5T3Y7 98 aa10.18□□□□□ -0.78
CLN6-210ENST00000635747 HRCT1Q6UXD1 115 aa10.18□□□□□ -0.78
CLN6-210ENST00000635747 SEC61BP60468 96 aaKnown RBP10.17□□□□□ -0.78
CLN6-210ENST00000635747 LINC01547P58512 204 aaPredicted RBP10.16□□□□□ -0.78
CLN6-210ENST00000635747 SMIM29Q86T20 159 aa10.16□□□□□ -0.78
CLN6-210ENST00000635747 PRO1854Q9UHT4 67 aa10.16□□□□□ -0.78
CLN6-210ENST00000635747 H7C2G1 150 aa10.15□□□□□ -0.78
CLN6-210ENST00000635747 FAT4Q6V0I7 4981 aa10.14□□□□□ -0.79
CLN6-210ENST00000635747 XP32Q5T750 250 aa10.11□□□□□ -0.79
CLN6-210ENST00000635747 Q5XG85 94 aa10.11□□□□□ -0.79
CLN6-210ENST00000635747 LINC00575Q6W349 94 aa10.11□□□□□ -0.79
CLN6-210ENST00000635747 hADV29S1A0JD25 119 aa10.09□□□□□ -0.79
CLN6-210ENST00000635747 F8WEM9 126 aa10.08□□□□□ -0.8
CLN6-210ENST00000635747 K7ERJ3 54 aa10.07□□□□□ -0.8
CLN6-210ENST00000635747 H0YGX0 51 aa10.06□□□□□ -0.8
CLN6-210ENST00000635747 LCE2AQ5TA79 106 aaPredicted RBP10.06□□□□□ -0.8
CLN6-210ENST00000635747 Q6ZQY7 126 aa10.05□□□□□ -0.8
CLN6-210ENST00000635747 TCL1BO95988 128 aa10.02□□□□□ -0.81
CLN6-210ENST00000635747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.02□□□□□ -0.81
CLN6-210ENST00000635747 PPDPFLQ8WWR9 84 aa10.02□□□□□ -0.81
CLN6-210ENST00000635747 TRIAP1O43715 76 aa10.01□□□□□ -0.81
CLN6-210ENST00000635747 COX6CP09669 75 aa10.01□□□□□ -0.81
CLN6-210ENST00000635747 C1orf195Q5TG92 126 aa10.01□□□□□ -0.81
CLN6-210ENST00000635747 Q6JHZ5 121 aa10.01□□□□□ -0.81
CLN6-210ENST00000635747 A0A0G2JQZ4 141 aa10□□□□□ -0.81
CLN6-210ENST00000635747 SNCGO76070 127 aa10□□□□□ -0.81
CLN6-210ENST00000635747 A0A1B0GX51 115 aa9.99□□□□□ -0.81
CLN6-210ENST00000635747 C9orf92A6NGG3 77 aa9.99□□□□□ -0.81
CLN6-210ENST00000635747 PSMB2P49721 201 aa9.99□□□□□ -0.81
CLN6-210ENST00000635747 BATFQ16520 125 aa9.99□□□□□ -0.81
CLN6-210ENST00000635747 IGLV8-61A0A075B6I0 122 aa9.98□□□□□ -0.81
CLN6-210ENST00000635747 OCIAD2Q56VL3 154 aa9.97□□□□□ -0.81
CLN6-210ENST00000635747 CLEC2BQ92478 149 aa9.96□□□□□ -0.82
CLN6-210ENST00000635747 SNHG12Q9BXW3 62 aa9.96□□□□□ -0.82
CLN6-210ENST00000635747 KRTAP4-1Q9BYQ7 146 aa9.96□□□□□ -0.82
CLN6-210ENST00000635747 PCP4L1A6NKN8 68 aa9.93□□□□□ -0.82
CLN6-210ENST00000635747 IGFL1Q6UW32 110 aa9.93□□□□□ -0.82
CLN6-210ENST00000635747 SCGB1C2P0DMR2 95 aa9.92□□□□□ -0.82
CLN6-210ENST00000635747 FAM218AQ96MZ4 157 aa9.92□□□□□ -0.82
CLN6-210ENST00000635747 TRBV7-7A0A0K0K1E9 115 aa9.91□□□□□ -0.82
CLN6-210ENST00000635747 COL5A1-AS1Q5SY13 56 aa9.91□□□□□ -0.82
CLN6-210ENST00000635747 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
CLN6-210ENST00000635747 GHRHP01286 108 aa9.9□□□□□ -0.82
CLN6-210ENST00000635747 PCOTHQ58A44 107 aa9.9□□□□□ -0.82
CLN6-210ENST00000635747 C9orf118A6NHY6 69 aa9.89□□□□□ -0.83
CLN6-210ENST00000635747 TAX1BP3O14907 124 aa9.89□□□□□ -0.83
CLN6-210ENST00000635747 LST1O00453 97 aa9.88□□□□□ -0.83
CLN6-210ENST00000635747 TRACP01848 142 aa9.88□□□□□ -0.83
CLN6-210ENST00000635747 H3BQ85 93 aa9.87□□□□□ -0.83
CLN6-210ENST00000635747 DNAL4O96015 105 aa9.86□□□□□ -0.83
CLN6-210ENST00000635747 TRBV20-1A0A075B6N2 111 aa9.85□□□□□ -0.83
CLN6-210ENST00000635747 H3BUT2 72 aa9.85□□□□□ -0.83
CLN6-210ENST00000635747 NAA38Q9BRA0 125 aaKnown RBP9.84□□□□□ -0.83
CLN6-210ENST00000635747 RPL37P61927 97 aaKnown RBP9.83□□□□□ -0.84
CLN6-210ENST00000635747 ATXN8Q156A1 80 aa9.83□□□□□ -0.84
CLN6-210ENST00000635747 A0A1W2PPM0 123 aa9.82□□□□□ -0.84
CLN6-210ENST00000635747 NDUFV3P56181 108 aaKnown RBP9.82□□□□□ -0.84
CLN6-210ENST00000635747 Q6Q795 121 aa9.81□□□□□ -0.84
CLN6-210ENST00000635747 KRTAP9-2Q9BYQ4 174 aa9.81□□□□□ -0.84
CLN6-210ENST00000635747 ORMDL1Q9P0S3 153 aa9.81□□□□□ -0.84
CLN6-210ENST00000635747 SS18L2Q9UHA2 77 aa9.81□□□□□ -0.84
CLN6-210ENST00000635747 FABP2P12104 132 aa9.8□□□□□ -0.84
CLN6-210ENST00000635747 TEN1Q86WV5 123 aa9.79□□□□□ -0.84
CLN6-210ENST00000635747 TMEM256-PLSCR3K7ERE1 68 aa9.78□□□□□ -0.84
CLN6-210ENST00000635747 H3BMG7 143 aa9.76□□□□□ -0.85
CLN6-210ENST00000635747 UBE2V1Q13404 147 aa9.73□□□□□ -0.85
CLN6-210ENST00000635747 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
CLN6-210ENST00000635747 BAALC-AS2P0C853 105 aa9.71□□□□□ -0.86
CLN6-210ENST00000635747 KRTAP19-2Q3LHN2 52 aa9.71□□□□□ -0.86
CLN6-210ENST00000635747 OBSCN-AS1Q96MR7 158 aa9.71□□□□□ -0.86
CLN6-210ENST00000635747 SPCS1Q9Y6A9 102 aa9.71□□□□□ -0.86
CLN6-210ENST00000635747 Q75L30 129 aa9.7□□□□□ -0.86
CLN6-210ENST00000635747 A0A087WSZ3 146 aa9.69□□□□□ -0.86
CLN6-210ENST00000635747 ATP11AUNQ6ZP68 121 aa9.68□□□□□ -0.86
CLN6-210ENST00000635747 C9JAW5 83 aa9.67□□□□□ -0.86
CLN6-210ENST00000635747 K7EP34 96 aa9.66□□□□□ -0.86
CLN6-210ENST00000635747 ANKRD29Q8N6D5 301 aa9.66□□□□□ -0.86
CLN6-210ENST00000635747 H3BT86 120 aa9.65□□□□□ -0.86
CLN6-210ENST00000635747 GTF2H5Q6ZYL4 71 aa9.64□□□□□ -0.87
CLN6-210ENST00000635747 Q96NJ1 140 aa9.64□□□□□ -0.87
CLN6-210ENST00000635747 TRBV7-4A0A0J9YYF1 115 aa9.63□□□□□ -0.87
CLN6-210ENST00000635747 A0A1W2PNM2 257 aa9.63□□□□□ -0.87
CLN6-210ENST00000635747 MT1HP80294 61 aa9.63□□□□□ -0.87
CLN6-210ENST00000635747 JMJD7-PLA2G4BH0Y9G9 81 aa9.61□□□□□ -0.87
CLN6-210ENST00000635747 COX6B2Q6YFQ2 88 aa9.61□□□□□ -0.87
CLN6-210ENST00000635747 RBM3P98179 157 aaKnown RBP9.6□□□□□ -0.87
CLN6-210ENST00000635747 C20orf166-AS1Q96NR2 134 aa9.59□□□□□ -0.87
CLN6-210ENST00000635747 DSCR8Q96T75 97 aa9.57□□□□□ -0.88
CLN6-210ENST00000635747 LCE2DQ5TA82 110 aaPredicted RBP9.56□□□□□ -0.88
CLN6-210ENST00000635747 SIGMAR1Q99720 223 aa9.56□□□□□ -0.88
CLN6-210ENST00000635747 A0A1B0GV72 72 aa9.55□□□□□ -0.88
CLN6-210ENST00000635747 A8MUU9 505 aa9.55□□□□□ -0.88
CLN6-210ENST00000635747 CCKP06307 115 aa9.55□□□□□ -0.88
CLN6-210ENST00000635747 PDE6GP18545 87 aa9.55□□□□□ -0.88
CLN6-210ENST00000635747 C21orf62-AS1Q17RA5 79 aa9.55□□□□□ -0.88
CLN6-210ENST00000635747 PRO0461Q9UI25 63 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms