RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 Q6JHZ5 121 aa6.5□□□□□ -1.37
UBR1-212ENST00000627960 HIST1H4GQ99525 98 aa6.5□□□□□ -1.37
UBR1-212ENST00000627960 COX8AP10176 69 aa6.49□□□□□ -1.37
UBR1-212ENST00000627960 OCIAD2Q56VL3 154 aa6.49□□□□□ -1.37
UBR1-212ENST00000627960 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.49□□□□□ -1.37
UBR1-212ENST00000627960 C12orf57Q99622 126 aa6.49□□□□□ -1.37
UBR1-212ENST00000627960 RPL37P61927 97 aaKnown RBP6.48□□□□□ -1.37
UBR1-212ENST00000627960 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
UBR1-212ENST00000627960 IGFL1Q6UW32 110 aa6.48□□□□□ -1.37
UBR1-212ENST00000627960 TRBV7-7A0A0K0K1E9 115 aa6.47□□□□□ -1.37
UBR1-212ENST00000627960 KRTAP9-6A0A140TA67 174 aa6.47□□□□□ -1.37
UBR1-212ENST00000627960 DLEU1O43261 78 aa6.47□□□□□ -1.37
UBR1-212ENST00000627960 PPDPFLQ8WWR9 84 aa6.47□□□□□ -1.37
UBR1-212ENST00000627960 CLEC2BQ92478 149 aa6.47□□□□□ -1.37
UBR1-212ENST00000627960 MT1HP80294 61 aa6.46□□□□□ -1.38
UBR1-212ENST00000627960 LCE2DQ5TA82 110 aaPredicted RBP6.46□□□□□ -1.38
UBR1-212ENST00000627960 CFC1BP0CG36 223 aa6.44□□□□□ -1.38
UBR1-212ENST00000627960 CFC1P0CG37 223 aa6.44□□□□□ -1.38
UBR1-212ENST00000627960 SNHG12Q9BXW3 62 aa6.44□□□□□ -1.38
UBR1-212ENST00000627960 C14orf144Q96I85 54 aa6.43□□□□□ -1.38
UBR1-212ENST00000627960 RAB37Q96AX2 223 aa6.42□□□□□ -1.38
UBR1-212ENST00000627960 HIGD1BQ9P298 99 aa6.42□□□□□ -1.38
UBR1-212ENST00000627960 H0YGX0 51 aa6.41□□□□□ -1.38
UBR1-212ENST00000627960 H3BUT2 72 aa6.41□□□□□ -1.38
UBR1-212ENST00000627960 A0A0B4J2C4 111 aa6.4□□□□□ -1.38
UBR1-212ENST00000627960 SPATA45Q537H7 98 aa6.4□□□□□ -1.38
UBR1-212ENST00000627960 PAM16Q9Y3D7 125 aa6.4□□□□□ -1.38
UBR1-212ENST00000627960 LST1O00453 97 aa6.39□□□□□ -1.39
UBR1-212ENST00000627960 SNCGO76070 127 aa6.39□□□□□ -1.39
UBR1-212ENST00000627960 FAM218AQ96MZ4 157 aa6.39□□□□□ -1.39
UBR1-212ENST00000627960 C2orf91Q6ZV80 131 aa6.38□□□□□ -1.39
UBR1-212ENST00000627960 OBSCN-AS1Q96MR7 158 aa6.38□□□□□ -1.39
UBR1-212ENST00000627960 Q6Q795 121 aa6.37□□□□□ -1.39
UBR1-212ENST00000627960 VAMP8Q9BV40 100 aa6.37□□□□□ -1.39
UBR1-212ENST00000627960 NDUFV3P56181 108 aaKnown RBP6.36□□□□□ -1.39
UBR1-212ENST00000627960 Q75L30 129 aa6.36□□□□□ -1.39
UBR1-212ENST00000627960 CEND1Q8N111 149 aa6.36□□□□□ -1.39
UBR1-212ENST00000627960 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
UBR1-212ENST00000627960 ATP11AUNQ6ZP68 121 aa6.35□□□□□ -1.39
UBR1-212ENST00000627960 TEN1Q86WV5 123 aa6.35□□□□□ -1.39
UBR1-212ENST00000627960 SS18L2Q9UHA2 77 aa6.35□□□□□ -1.39
UBR1-212ENST00000627960 PRO1854Q9UHT4 67 aa6.35□□□□□ -1.39
UBR1-212ENST00000627960 A0A1B0GX51 115 aa6.34□□□□□ -1.39
UBR1-212ENST00000627960 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
UBR1-212ENST00000627960 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
UBR1-212ENST00000627960 H3BMG7 143 aa6.33□□□□□ -1.4
UBR1-212ENST00000627960 GHRHP01286 108 aa6.33□□□□□ -1.4
UBR1-212ENST00000627960 Q96NJ1 140 aa6.33□□□□□ -1.4
UBR1-212ENST00000627960 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
UBR1-212ENST00000627960 FLGP20930 4061 aaPredicted RBP6.32□□□□□ -1.4
UBR1-212ENST00000627960 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
UBR1-212ENST00000627960 A6NJY4 79 aa6.32□□□□□ -1.4
UBR1-212ENST00000627960 M0R2T5 61 aa6.32□□□□□ -1.4
UBR1-212ENST00000627960 A0A087WSZ3 146 aa6.31□□□□□ -1.4
UBR1-212ENST00000627960 FABP2P12104 132 aa6.31□□□□□ -1.4
UBR1-212ENST00000627960 FXYD2P54710 66 aa6.31□□□□□ -1.4
UBR1-212ENST00000627960 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
UBR1-212ENST00000627960 TRIAP1O43715 76 aa6.3□□□□□ -1.4
UBR1-212ENST00000627960 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
UBR1-212ENST00000627960 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
UBR1-212ENST00000627960 A8MUU9 505 aa6.27□□□□□ -1.41
UBR1-212ENST00000627960 HSD52Q0P140 79 aa6.26□□□□□ -1.41
UBR1-212ENST00000627960 H3BQ85 93 aa6.25□□□□□ -1.41
UBR1-212ENST00000627960 PYY3Q5JQD4 70 aa6.25□□□□□ -1.41
UBR1-212ENST00000627960 ANKRD29Q8N6D5 301 aa6.25□□□□□ -1.41
UBR1-212ENST00000627960 ORMDL1Q9P0S3 153 aa6.25□□□□□ -1.41
UBR1-212ENST00000627960 DNAL4O96015 105 aa6.24□□□□□ -1.41
UBR1-212ENST00000627960 PSMB2P49721 201 aa6.24□□□□□ -1.41
UBR1-212ENST00000627960 DSCR10P59022 87 aa6.24□□□□□ -1.41
UBR1-212ENST00000627960 TRBV7-4A0A0J9YYF1 115 aa6.23□□□□□ -1.41
UBR1-212ENST00000627960 K7ERJ3 54 aa6.23□□□□□ -1.41
UBR1-212ENST00000627960 TMEM256-PLSCR3K7ERE1 68 aa6.22□□□□□ -1.41
UBR1-212ENST00000627960 COX6CP09669 75 aa6.22□□□□□ -1.41
UBR1-212ENST00000627960 SIGMAR1Q99720 223 aa6.22□□□□□ -1.41
UBR1-212ENST00000627960 A0A1B0GV72 72 aa6.21□□□□□ -1.42
UBR1-212ENST00000627960 LINC00313P59037 77 aa6.21□□□□□ -1.42
UBR1-212ENST00000627960 TMA7Q9Y2S6 64 aaKnown RBP6.21□□□□□ -1.42
UBR1-212ENST00000627960 IGKV4-1P06312 121 aa6.2□□□□□ -1.42
UBR1-212ENST00000627960 TRBV20-1A0A075B6N2 111 aa6.18□□□□□ -1.42
UBR1-212ENST00000627960 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
UBR1-212ENST00000627960 CCKP06307 115 aa6.18□□□□□ -1.42
UBR1-212ENST00000627960 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
UBR1-212ENST00000627960 LINC00472Q9H8W2 130 aa6.18□□□□□ -1.42
UBR1-212ENST00000627960 UQCR10Q9UDW1 63 aa6.18□□□□□ -1.42
UBR1-212ENST00000627960 TRACP01848 142 aa6.16□□□□□ -1.42
UBR1-212ENST00000627960 DEFB116Q30KQ4 102 aa6.16□□□□□ -1.42
UBR1-212ENST00000627960 NOTCH2NLQ7Z3S9 236 aa6.16□□□□□ -1.42
UBR1-212ENST00000627960 SCGB1C2P0DMR2 95 aa6.14□□□□□ -1.43
UBR1-212ENST00000627960 IGHV6-1A0A0B4J1U7 121 aa6.13□□□□□ -1.43
UBR1-212ENST00000627960 RBM3P98179 157 aaKnown RBP6.12□□□□□ -1.43
UBR1-212ENST00000627960 VPS25Q9BRG1 176 aa6.11□□□□□ -1.43
UBR1-212ENST00000627960 KRTAP9-8Q9BYQ0 159 aa6.11□□□□□ -1.43
UBR1-212ENST00000627960 DSCR8Q96T75 97 aa6.1□□□□□ -1.43
UBR1-212ENST00000627960 A0A1B0GVX0 72 aa6.09□□□□□ -1.43
UBR1-212ENST00000627960 C8orf87E5RJ46 101 aa6.09□□□□□ -1.43
UBR1-212ENST00000627960 BAALC-AS2P0C853 105 aa6.09□□□□□ -1.43
UBR1-212ENST00000627960 HRES1P13985 223 aa6.08□□□□□ -1.44
UBR1-212ENST00000627960 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
UBR1-212ENST00000627960 FAM236DA0A1B0GTK5 79 aa6.07□□□□□ -1.44
UBR1-212ENST00000627960 C9JAW5 83 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms