RNA–Protein interactions for RNA: ENST00000620847.1

GDNF-208, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-208ENST00000620847 HCG22E2RYF7 251 aa5.16□□□□□ -1.58
GDNF-208ENST00000620847 MP68P56378 58 aa5.16□□□□□ -1.58
GDNF-208ENST00000620847 SPRR4Q96PI1 79 aa5.16□□□□□ -1.58
GDNF-208ENST00000620847 NOTCH1P46531 2555 aa5.15□□□□□ -1.58
GDNF-208ENST00000620847 PRB2P02812 416 aaPredicted RBP5.15□□□□□ -1.58
GDNF-208ENST00000620847 PSCAO43653 123 aa5.15□□□□□ -1.59
GDNF-208ENST00000620847 REG3GQ6UW15 175 aa5.14□□□□□ -1.59
GDNF-208ENST00000620847 A8MUN3 132 aa5.13□□□□□ -1.59
GDNF-208ENST00000620847 K7EIL1 84 aa5.13□□□□□ -1.59
GDNF-208ENST00000620847 UBE2BP63146 152 aa5.13□□□□□ -1.59
GDNF-208ENST00000620847 LYSTQ99698 3801 aa5.12□□□□□ -1.59
GDNF-208ENST00000620847 LCE2DQ5TA82 110 aaPredicted RBP5.12□□□□□ -1.59
GDNF-208ENST00000620847 B9D2Q9BPU9 175 aa5.12□□□□□ -1.59
GDNF-208ENST00000620847 DNAH10Q8IVF4 4471 aa5.12□□□□□ -1.59
GDNF-208ENST00000620847 WFDC13Q8IUB5 93 aa5.11□□□□□ -1.59
GDNF-208ENST00000620847 LINC00208Q96KT6 92 aa5.11□□□□□ -1.59
GDNF-208ENST00000620847 MDFIQ99750 246 aa5.11□□□□□ -1.59
GDNF-208ENST00000620847 KRTAP1-5Q9BYS1 174 aa5.11□□□□□ -1.59
GDNF-208ENST00000620847 A0A096LNI7 61 aa5.1□□□□□ -1.59
GDNF-208ENST00000620847 DNAH9Q9NYC9 4486 aa5.1□□□□□ -1.59
GDNF-208ENST00000620847 C16orf90A8MZG2 172 aa5.1□□□□□ -1.59
GDNF-208ENST00000620847 CNBPP62633 177 aaKnown RBP5.1□□□□□ -1.59
GDNF-208ENST00000620847 LIMD2Q9BT23 127 aa5.1□□□□□ -1.59
GDNF-208ENST00000620847 UBE2AP49459 152 aa5.09□□□□□ -1.59
GDNF-208ENST00000620847 LINC00476Q8WZB0 136 aa5.09□□□□□ -1.59
GDNF-208ENST00000620847 A0A1W2PNN7 141 aa5.09□□□□□ -1.59
GDNF-208ENST00000620847 CHKB-CPT1BH3BT56 60 aa5.09□□□□□ -1.59
GDNF-208ENST00000620847 CD164Q04900 197 aa5.08□□□□□ -1.6
GDNF-208ENST00000620847 Q5VV11 94 aa5.08□□□□□ -1.6
GDNF-208ENST00000620847 SPANXA2-OT1Q8N9U9 137 aa5.08□□□□□ -1.6
GDNF-208ENST00000620847 DEFB116Q30KQ4 102 aa5.08□□□□□ -1.6
GDNF-208ENST00000620847 COL7A1Q02388 2944 aa5.08□□□□□ -1.6
GDNF-208ENST00000620847 H3BPC8 53 aa5.08□□□□□ -1.6
GDNF-208ENST00000620847 IGFL1Q6UW32 110 aa5.08□□□□□ -1.6
GDNF-208ENST00000620847 IGLV8-61A0A075B6I0 122 aa5.07□□□□□ -1.6
GDNF-208ENST00000620847 IGKV2-24A0A0C4DH68 120 aa5.07□□□□□ -1.6
GDNF-208ENST00000620847 PRLHP81277 87 aa5.07□□□□□ -1.6
GDNF-208ENST00000620847 A0A0G2JQZ4 141 aa5.06□□□□□ -1.6
GDNF-208ENST00000620847 H0Y9P7 68 aa5.06□□□□□ -1.6
GDNF-208ENST00000620847 Q8N9P0 234 aaPredicted RBP5.06□□□□□ -1.6
GDNF-208ENST00000620847 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
GDNF-208ENST00000620847 DYNC2H1Q8NCM8 4307 aaKnown RBP5.06□□□□□ -1.6
GDNF-208ENST00000620847 A0A087WSZ3 146 aa5.06□□□□□ -1.6
GDNF-208ENST00000620847 APLNQ9ULZ1 77 aa5.05□□□□□ -1.6
GDNF-208ENST00000620847 CASC2Q6XLA1 102 aa5.04□□□□□ -1.6
GDNF-208ENST00000620847 KRTAP11-1Q8IUC1 163 aa5.04□□□□□ -1.6
GDNF-208ENST00000620847 SPTSSBQ8NFR3 76 aa5.04□□□□□ -1.6
GDNF-208ENST00000620847 DNAH7Q8WXX0 4024 aa5.04□□□□□ -1.6
GDNF-208ENST00000620847 A8MU10 97 aa5.03□□□□□ -1.6
GDNF-208ENST00000620847 C14orf177Q52M58 125 aa5.03□□□□□ -1.6
GDNF-208ENST00000620847 KRTAP29-1A8MX34 341 aaPredicted RBP5.03□□□□□ -1.6
GDNF-208ENST00000620847 H0Y9J4 135 aa5.03□□□□□ -1.6
GDNF-208ENST00000620847 PHF5AQ7RTV0 110 aaKnown RBP5.03□□□□□ -1.6
GDNF-208ENST00000620847 UBE2DNLQ8IWF7 75 aa5.03□□□□□ -1.6
GDNF-208ENST00000620847 STAB2Q8WWQ8 2551 aa5.03□□□□□ -1.6
GDNF-208ENST00000620847 CSMD3Q7Z407 3707 aa5.03□□□□□ -1.6
GDNF-208ENST00000620847 CHTF8P0CG12 524 aa5.03□□□□□ -1.6
GDNF-208ENST00000620847 RPL37AP61513 92 aaKnown RBP5.03□□□□□ -1.6
GDNF-208ENST00000620847 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
GDNF-208ENST00000620847 A6NED7 52 aa5.02□□□□□ -1.61
GDNF-208ENST00000620847 SPRR1BP22528 89 aa5.02□□□□□ -1.61
GDNF-208ENST00000620847 ATP11AUNQ6ZP68 121 aa5.02□□□□□ -1.61
GDNF-208ENST00000620847 SRRM2Q9UQ35 2752 aaKnown RBP5.01□□□□□ -1.61
GDNF-208ENST00000620847 C9orf163Q8N9P6 203 aa5.01□□□□□ -1.61
GDNF-208ENST00000620847 Q75L30 129 aa5□□□□□ -1.61
GDNF-208ENST00000620847 NDUFS5O43920 106 aa4.99□□□□□ -1.61
GDNF-208ENST00000620847 COA5Q86WW8 74 aa4.99□□□□□ -1.61
GDNF-208ENST00000620847 A8MWP4 228 aa4.99□□□□□ -1.61
GDNF-208ENST00000620847 LOC101927531A0A1B0GV80 90 aa4.99□□□□□ -1.61
GDNF-208ENST00000620847 PLECQ15149 4684 aaKnown RBP4.99□□□□□ -1.61
GDNF-208ENST00000620847 TENM2Q9NT68 2774 aa4.98□□□□□ -1.61
GDNF-208ENST00000620847 LCA10Q71F78 164 aa4.98□□□□□ -1.61
GDNF-208ENST00000620847 IGLV7-46A0A075B6I9 117 aa4.97□□□□□ -1.61
GDNF-208ENST00000620847 NBDYA0A0U1RRE5 68 aa4.97□□□□□ -1.61
GDNF-208ENST00000620847 Q6ZRN7 208 aaPredicted RBP4.97□□□□□ -1.61
GDNF-208ENST00000620847 KRTAP13-1Q8IUC0 172 aa4.97□□□□□ -1.61
GDNF-208ENST00000620847 PANO1I0J062 215 aa4.97□□□□□ -1.61
GDNF-208ENST00000620847 LINC00472Q9H8W2 130 aa4.97□□□□□ -1.61
GDNF-208ENST00000620847 RBM12B-AS1Q9P1G2 102 aa4.97□□□□□ -1.61
GDNF-208ENST00000620847 CDC42SE1Q9NRR8 79 aa4.96□□□□□ -1.62
GDNF-208ENST00000620847 PCOTHQ58A44 107 aa4.94□□□□□ -1.62
GDNF-208ENST00000620847 A6NN06 94 aa4.93□□□□□ -1.62
GDNF-208ENST00000620847 SPAG11AQ6PDA7 123 aa4.93□□□□□ -1.62
GDNF-208ENST00000620847 NUPR2A6NF83 97 aa4.93□□□□□ -1.62
GDNF-208ENST00000620847 SPACA4Q8TDM5 124 aa4.93□□□□□ -1.62
GDNF-208ENST00000620847 TP53AIP1Q9HCN2 124 aa4.93□□□□□ -1.62
GDNF-208ENST00000620847 LINC01558Q9Y6Z2 57 aa4.93□□□□□ -1.62
GDNF-208ENST00000620847 MMP24-AS1A0A0U1RRL7 71 aa4.92□□□□□ -1.62
GDNF-208ENST00000620847 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.92□□□□□ -1.62
GDNF-208ENST00000620847 VPS13DQ5THJ4 4388 aa4.92□□□□□ -1.62
GDNF-208ENST00000620847 KRTAP3-3Q9BYR6 98 aa4.92□□□□□ -1.62
GDNF-208ENST00000620847 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
GDNF-208ENST00000620847 C7orf65Q6ZTY9 151 aa4.91□□□□□ -1.62
GDNF-208ENST00000620847 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
GDNF-208ENST00000620847 HECTD4Q9Y4D8 3996 aa4.91□□□□□ -1.62
GDNF-208ENST00000620847 LINC00483Q53H64 154 aa4.9□□□□□ -1.63
GDNF-208ENST00000620847 Q96NJ1 140 aa4.9□□□□□ -1.63
GDNF-208ENST00000620847 PRKDCP78527 4128 aaKnown RBP4.89□□□□□ -1.63
GDNF-208ENST00000620847 MOBPQ13875 183 aa4.89□□□□□ -1.63
GDNF-208ENST00000620847 A0A087WTM6 91 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms