RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 CASC2Q6XLA1 102 aa6.33□□□□□ -1.4
TNFAIP3-210ENST00000620204 Q6ZRX8 168 aa6.33□□□□□ -1.4
TNFAIP3-210ENST00000620204 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
TNFAIP3-210ENST00000620204 PKD1L1Q8TDX9 2849 aa6.33□□□□□ -1.4
TNFAIP3-210ENST00000620204 LINC00476Q8WZB0 136 aa6.33□□□□□ -1.4
TNFAIP3-210ENST00000620204 IGKV2-24A0A0C4DH68 120 aa6.32□□□□□ -1.4
TNFAIP3-210ENST00000620204 Q9BRP9 147 aa6.32□□□□□ -1.4
TNFAIP3-210ENST00000620204 ZCCHC13Q8WW36 166 aaKnown RBP6.32□□□□□ -1.4
TNFAIP3-210ENST00000620204 CYP4F30PQ9H0H9 118 aa6.32□□□□□ -1.4
TNFAIP3-210ENST00000620204 LINC00588Q9Y4M8 146 aa6.31□□□□□ -1.4
TNFAIP3-210ENST00000620204 PRLHP81277 87 aa6.31□□□□□ -1.4
TNFAIP3-210ENST00000620204 C15orf56Q8N910 161 aa6.31□□□□□ -1.4
TNFAIP3-210ENST00000620204 KCNQ1DNQ9H478 68 aa6.3□□□□□ -1.4
TNFAIP3-210ENST00000620204 LCA10Q71F78 164 aa6.29□□□□□ -1.4
TNFAIP3-210ENST00000620204 COA5Q86WW8 74 aa6.29□□□□□ -1.4
TNFAIP3-210ENST00000620204 ATP11AUNQ6ZP68 121 aa6.28□□□□□ -1.4
TNFAIP3-210ENST00000620204 IGFL1Q6UW32 110 aa6.27□□□□□ -1.41
TNFAIP3-210ENST00000620204 Q8NAQ8 132 aa6.26□□□□□ -1.41
TNFAIP3-210ENST00000620204 C11orf45Q8TAV5 145 aa6.25□□□□□ -1.41
TNFAIP3-210ENST00000620204 LCE6AA0A183 80 aa6.25□□□□□ -1.41
TNFAIP3-210ENST00000620204 LOC101927531A0A1B0GV80 90 aa6.24□□□□□ -1.41
TNFAIP3-210ENST00000620204 SPRR4Q96PI1 79 aa6.24□□□□□ -1.41
TNFAIP3-210ENST00000620204 IGLV1-50A0A075B6I6 118 aa6.23□□□□□ -1.41
TNFAIP3-210ENST00000620204 A0A1B0GW54 56 aa6.23□□□□□ -1.41
TNFAIP3-210ENST00000620204 REG3GQ6UW15 175 aa6.23□□□□□ -1.41
TNFAIP3-210ENST00000620204 SRRM2Q9UQ35 2752 aaKnown RBP6.23□□□□□ -1.41
TNFAIP3-210ENST00000620204 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
TNFAIP3-210ENST00000620204 KRTAP10-11P60412 298 aa6.22□□□□□ -1.41
TNFAIP3-210ENST00000620204 C7orf65Q6ZTY9 151 aa6.21□□□□□ -1.41
TNFAIP3-210ENST00000620204 CASC10Q5T4H9 136 aa6.21□□□□□ -1.42
TNFAIP3-210ENST00000620204 TNP2Q05952 138 aa6.2□□□□□ -1.42
TNFAIP3-210ENST00000620204 TENM3Q9P273 2699 aa6.2□□□□□ -1.42
TNFAIP3-210ENST00000620204 DEFB131BA0A096LNP1 70 aa6.2□□□□□ -1.42
TNFAIP3-210ENST00000620204 SPINK7P58062 85 aa6.2□□□□□ -1.42
TNFAIP3-210ENST00000620204 CDC42SE1Q9NRR8 79 aa6.2□□□□□ -1.42
TNFAIP3-210ENST00000620204 MDFIQ99750 246 aa6.19□□□□□ -1.42
TNFAIP3-210ENST00000620204 MOBPQ13875 183 aa6.19□□□□□ -1.42
TNFAIP3-210ENST00000620204 Q75L30 129 aa6.19□□□□□ -1.42
TNFAIP3-210ENST00000620204 SPANXA2-OT1Q8N9U9 137 aa6.18□□□□□ -1.42
TNFAIP3-210ENST00000620204 C4orf48Q5BLP8 95 aa6.18□□□□□ -1.42
TNFAIP3-210ENST00000620204 KRTAP26-1Q6PEX3 210 aa6.17□□□□□ -1.42
TNFAIP3-210ENST00000620204 CDK2AP2O75956 126 aa6.17□□□□□ -1.42
TNFAIP3-210ENST00000620204 A6NN06 94 aa6.16□□□□□ -1.42
TNFAIP3-210ENST00000620204 CNBPP62633 177 aaKnown RBP6.16□□□□□ -1.42
TNFAIP3-210ENST00000620204 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
TNFAIP3-210ENST00000620204 PRR26Q8N8Z3 221 aa6.16□□□□□ -1.42
TNFAIP3-210ENST00000620204 STAB2Q8WWQ8 2551 aa6.16□□□□□ -1.42
TNFAIP3-210ENST00000620204 IGLV9-49A0A0B4J1Y8 123 aa6.15□□□□□ -1.42
TNFAIP3-210ENST00000620204 A8MWP4 228 aa6.15□□□□□ -1.43
TNFAIP3-210ENST00000620204 H3BPC8 53 aa6.14□□□□□ -1.43
TNFAIP3-210ENST00000620204 KRTAP4-16G5E9R7 235 aaPredicted RBP6.13□□□□□ -1.43
TNFAIP3-210ENST00000620204 PHF5AQ7RTV0 110 aaKnown RBP6.13□□□□□ -1.43
TNFAIP3-210ENST00000620204 LINC01556Q5JQF7 62 aa6.13□□□□□ -1.43
TNFAIP3-210ENST00000620204 KRTAP29-1A8MX34 341 aaPredicted RBP6.12□□□□□ -1.43
TNFAIP3-210ENST00000620204 LINC00313P59037 77 aa6.12□□□□□ -1.43
TNFAIP3-210ENST00000620204 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
TNFAIP3-210ENST00000620204 C8orf87E5RJ46 101 aa6.12□□□□□ -1.43
TNFAIP3-210ENST00000620204 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
TNFAIP3-210ENST00000620204 ADM2Q7Z4H4 148 aa6.12□□□□□ -1.43
TNFAIP3-210ENST00000620204 SPRR1AP35321 89 aa6.11□□□□□ -1.43
TNFAIP3-210ENST00000620204 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
TNFAIP3-210ENST00000620204 C9orf163Q8N9P6 203 aa6.1□□□□□ -1.43
TNFAIP3-210ENST00000620204 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
TNFAIP3-210ENST00000620204 H3BS24 57 aa6.09□□□□□ -1.43
TNFAIP3-210ENST00000620204 K7EIL1 84 aa6.09□□□□□ -1.44
TNFAIP3-210ENST00000620204 LINC01558Q9Y6Z2 57 aa6.08□□□□□ -1.44
TNFAIP3-210ENST00000620204 RETNLBQ9BQ08 111 aa6.08□□□□□ -1.44
TNFAIP3-210ENST00000620204 HRES1P13985 223 aa6.08□□□□□ -1.44
TNFAIP3-210ENST00000620204 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
TNFAIP3-210ENST00000620204 TLX1NBP0CAT3 122 aa6.05□□□□□ -1.44
TNFAIP3-210ENST00000620204 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
TNFAIP3-210ENST00000620204 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
TNFAIP3-210ENST00000620204 UBE2DNLQ8IWF7 75 aa6.05□□□□□ -1.44
TNFAIP3-210ENST00000620204 LINC00472Q9H8W2 130 aa6.05□□□□□ -1.44
TNFAIP3-210ENST00000620204 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
TNFAIP3-210ENST00000620204 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
TNFAIP3-210ENST00000620204 TP53AIP1Q9HCN2 124 aa6.02□□□□□ -1.45
TNFAIP3-210ENST00000620204 TENM2Q9NT68 2774 aa6.02□□□□□ -1.45
TNFAIP3-210ENST00000620204 IGLV5-37A0A075B6J1 123 aa6.02□□□□□ -1.45
TNFAIP3-210ENST00000620204 LINC01554Q52M75 96 aa6.02□□□□□ -1.45
TNFAIP3-210ENST00000620204 C8orf17Q9NRJ1 99 aa6.02□□□□□ -1.45
TNFAIP3-210ENST00000620204 A0A1B0GU69 56 aa6.02□□□□□ -1.45
TNFAIP3-210ENST00000620204 CSMD3Q7Z407 3707 aa6.01□□□□□ -1.45
TNFAIP3-210ENST00000620204 H3BNG1 76 aa6.01□□□□□ -1.45
TNFAIP3-210ENST00000620204 DNAH10OSP0CZ25 163 aa6.01□□□□□ -1.45
TNFAIP3-210ENST00000620204 ANAPC11Q9NYG5 84 aa5.99□□□□□ -1.45
TNFAIP3-210ENST00000620204 TGP01266 2768 aa5.98□□□□□ -1.45
TNFAIP3-210ENST00000620204 KRTAP11-1Q8IUC1 163 aa5.98□□□□□ -1.45
TNFAIP3-210ENST00000620204 MRPL34Q9BQ48 92 aaKnown RBP5.98□□□□□ -1.45
TNFAIP3-210ENST00000620204 ACYP2P14621 99 aa5.97□□□□□ -1.45
TNFAIP3-210ENST00000620204 A0A087X002 238 aa5.95□□□□□ -1.46
TNFAIP3-210ENST00000620204 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
TNFAIP3-210ENST00000620204 SPINK1P00995 79 aa5.95□□□□□ -1.46
TNFAIP3-210ENST00000620204 A0A1B0GVX0 72 aa5.94□□□□□ -1.46
TNFAIP3-210ENST00000620204 CSAG1Q6PB30 78 aa5.94□□□□□ -1.46
TNFAIP3-210ENST00000620204 DMBT1Q9UGM3 2413 aaPredicted RBP5.93□□□□□ -1.46
TNFAIP3-210ENST00000620204 MIR22HGQ0VDD5 57 aa5.93□□□□□ -1.46
TNFAIP3-210ENST00000620204 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
TNFAIP3-210ENST00000620204 Q5W150 140 aa5.9□□□□□ -1.47
TNFAIP3-210ENST00000620204 UQCR11O14957 56 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms