RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 Q8N377 158 aa4.54□□□□□ -1.68
SRGAP3-213ENST00000618999 Q8NBF4 154 aa4.54□□□□□ -1.68
SRGAP3-213ENST00000618999 KCNQ1DNQ9H478 68 aa4.54□□□□□ -1.68
SRGAP3-213ENST00000618999 HUWE1Q7Z6Z7 4374 aaKnown RBP4.54□□□□□ -1.68
SRGAP3-213ENST00000618999 NDUFB1O75438 58 aa4.54□□□□□ -1.68
SRGAP3-213ENST00000618999 C15orf56Q8N910 161 aa4.54□□□□□ -1.68
SRGAP3-213ENST00000618999 KRTAP21-3Q3LHN1 58 aa4.54□□□□□ -1.68
SRGAP3-213ENST00000618999 Q6ZRX8 168 aa4.54□□□□□ -1.68
SRGAP3-213ENST00000618999 NUPR2A6NF83 97 aa4.53□□□□□ -1.68
SRGAP3-213ENST00000618999 WFDC13Q8IUB5 93 aa4.53□□□□□ -1.68
SRGAP3-213ENST00000618999 DNAH3Q8TD57 4116 aa4.53□□□□□ -1.68
SRGAP3-213ENST00000618999 DNAH10OSP0CZ25 163 aa4.53□□□□□ -1.69
SRGAP3-213ENST00000618999 IGLV5-48A0A075B6I7 105 aa4.52□□□□□ -1.69
SRGAP3-213ENST00000618999 HCG22E2RYF7 251 aa4.52□□□□□ -1.69
SRGAP3-213ENST00000618999 PSPHP1O15172 72 aa4.51□□□□□ -1.69
SRGAP3-213ENST00000618999 LORP23490 312 aaPredicted RBP4.51□□□□□ -1.69
SRGAP3-213ENST00000618999 ST20-AS1Q8NBB2 130 aa4.51□□□□□ -1.69
SRGAP3-213ENST00000618999 A0A1W2PNM2 257 aa4.51□□□□□ -1.69
SRGAP3-213ENST00000618999 FAM229BQ4G0N7 80 aa4.51□□□□□ -1.69
SRGAP3-213ENST00000618999 LINC00476Q8WZB0 136 aa4.51□□□□□ -1.69
SRGAP3-213ENST00000618999 APLNQ9ULZ1 77 aa4.51□□□□□ -1.69
SRGAP3-213ENST00000618999 DNAH9Q9NYC9 4486 aa4.51□□□□□ -1.69
SRGAP3-213ENST00000618999 COL7A1Q02388 2944 aa4.5□□□□□ -1.69
SRGAP3-213ENST00000618999 K7EQZ3 153 aa4.5□□□□□ -1.69
SRGAP3-213ENST00000618999 PSCAO43653 123 aa4.5□□□□□ -1.69
SRGAP3-213ENST00000618999 LINC00208Q96KT6 92 aa4.49□□□□□ -1.69
SRGAP3-213ENST00000618999 UBE2AP49459 152 aa4.49□□□□□ -1.69
SRGAP3-213ENST00000618999 C1orf64Q8NEQ6 169 aa4.49□□□□□ -1.69
SRGAP3-213ENST00000618999 MEGF8Q7Z7M0 2845 aa4.49□□□□□ -1.69
SRGAP3-213ENST00000618999 IGLV1-50A0A075B6I6 118 aa4.49□□□□□ -1.69
SRGAP3-213ENST00000618999 A0A087WSZ3 146 aa4.49□□□□□ -1.69
SRGAP3-213ENST00000618999 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
SRGAP3-213ENST00000618999 IGKV2-24A0A0C4DH68 120 aa4.48□□□□□ -1.69
SRGAP3-213ENST00000618999 hDV103S1A0JD37 113 aa4.48□□□□□ -1.69
SRGAP3-213ENST00000618999 TENM2Q9NT68 2774 aa4.48□□□□□ -1.69
SRGAP3-213ENST00000618999 FAM168BA1KXE4 195 aa4.48□□□□□ -1.69
SRGAP3-213ENST00000618999 RBM12B-AS1Q9P1G2 102 aa4.48□□□□□ -1.69
SRGAP3-213ENST00000618999 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.47□□□□□ -1.69
SRGAP3-213ENST00000618999 Q9BRP9 147 aa4.47□□□□□ -1.69
SRGAP3-213ENST00000618999 KRTAP26-1Q6PEX3 210 aa4.47□□□□□ -1.69
SRGAP3-213ENST00000618999 TLX1NBP0CAT3 122 aa4.46□□□□□ -1.69
SRGAP3-213ENST00000618999 CASC10Q5T4H9 136 aa4.46□□□□□ -1.69
SRGAP3-213ENST00000618999 ZNF706Q9Y5V0 76 aaPredicted RBP4.46□□□□□ -1.69
SRGAP3-213ENST00000618999 H0Y9J4 135 aa4.46□□□□□ -1.7
SRGAP3-213ENST00000618999 TGP01266 2768 aa4.46□□□□□ -1.7
SRGAP3-213ENST00000618999 DSCR10P59022 87 aa4.46□□□□□ -1.7
SRGAP3-213ENST00000618999 CASC2Q6XLA1 102 aa4.46□□□□□ -1.7
SRGAP3-213ENST00000618999 SPRR4Q96PI1 79 aa4.46□□□□□ -1.7
SRGAP3-213ENST00000618999 H0Y9P7 68 aa4.45□□□□□ -1.7
SRGAP3-213ENST00000618999 PRLHP81277 87 aa4.45□□□□□ -1.7
SRGAP3-213ENST00000618999 KRTAP1-5Q9BYS1 174 aa4.45□□□□□ -1.7
SRGAP3-213ENST00000618999 CHKB-CPT1BH3BT56 60 aa4.44□□□□□ -1.7
SRGAP3-213ENST00000618999 NDUFS5O43920 106 aa4.44□□□□□ -1.7
SRGAP3-213ENST00000618999 FBN3Q75N90 2809 aa4.44□□□□□ -1.7
SRGAP3-213ENST00000618999 NBDYA0A0U1RRE5 68 aa4.44□□□□□ -1.7
SRGAP3-213ENST00000618999 LY6G6CO95867 125 aa4.44□□□□□ -1.7
SRGAP3-213ENST00000618999 Q1T7F1 81 aa4.44□□□□□ -1.7
SRGAP3-213ENST00000618999 A0A096LNI7 61 aa4.43□□□□□ -1.7
SRGAP3-213ENST00000618999 TRAV22A0A0B4J277 110 aa4.43□□□□□ -1.7
SRGAP3-213ENST00000618999 IGFL1Q6UW32 110 aa4.43□□□□□ -1.7
SRGAP3-213ENST00000618999 PRKDCP78527 4128 aaKnown RBP4.43□□□□□ -1.7
SRGAP3-213ENST00000618999 SPRR1AP35321 89 aa4.43□□□□□ -1.7
SRGAP3-213ENST00000618999 A0A0G2JQZ4 141 aa4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 A0A1W2PNN7 141 aa4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 A8MUN3 132 aa4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 H3BPC8 53 aa4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 RPL37AP61513 92 aaKnown RBP4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 PRR15LQ9BU68 103 aa4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 CYP4F30PQ9H0H9 118 aa4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 A6NED7 52 aa4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 PRR15Q8IV56 129 aa4.42□□□□□ -1.7
SRGAP3-213ENST00000618999 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
SRGAP3-213ENST00000618999 LIMD2Q9BT23 127 aa4.41□□□□□ -1.7
SRGAP3-213ENST00000618999 LCE6AA0A183 80 aa4.4□□□□□ -1.7
SRGAP3-213ENST00000618999 KRTAP4-16G5E9R7 235 aaPredicted RBP4.4□□□□□ -1.7
SRGAP3-213ENST00000618999 C14orf177Q52M58 125 aa4.4□□□□□ -1.71
SRGAP3-213ENST00000618999 ZCCHC13Q8WW36 166 aaKnown RBP4.4□□□□□ -1.71
SRGAP3-213ENST00000618999 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
SRGAP3-213ENST00000618999 A8MWP4 228 aa4.38□□□□□ -1.71
SRGAP3-213ENST00000618999 C16orf90A8MZG2 172 aa4.38□□□□□ -1.71
SRGAP3-213ENST00000618999 SPANXA2-OT1Q8N9U9 137 aa4.38□□□□□ -1.71
SRGAP3-213ENST00000618999 PCOTHQ58A44 107 aa4.37□□□□□ -1.71
SRGAP3-213ENST00000618999 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
SRGAP3-213ENST00000618999 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
SRGAP3-213ENST00000618999 PHF5AQ7RTV0 110 aaKnown RBP4.35□□□□□ -1.71
SRGAP3-213ENST00000618999 COA5Q86WW8 74 aa4.34□□□□□ -1.71
SRGAP3-213ENST00000618999 STARD9Q9P2P6 4700 aa4.34□□□□□ -1.71
SRGAP3-213ENST00000618999 IGLV8-61A0A075B6I0 122 aa4.34□□□□□ -1.72
SRGAP3-213ENST00000618999 TP53AIP1Q9HCN2 124 aa4.34□□□□□ -1.72
SRGAP3-213ENST00000618999 A0A087WTM6 91 aa4.33□□□□□ -1.72
SRGAP3-213ENST00000618999 CNBPP62633 177 aaKnown RBP4.33□□□□□ -1.72
SRGAP3-213ENST00000618999 Q6ZRN7 208 aaPredicted RBP4.33□□□□□ -1.72
SRGAP3-213ENST00000618999 CSMD3Q7Z407 3707 aa4.33□□□□□ -1.72
SRGAP3-213ENST00000618999 CHTF8P0CG12 524 aa4.33□□□□□ -1.72
SRGAP3-213ENST00000618999 Q6ZR54 194 aa4.33□□□□□ -1.72
SRGAP3-213ENST00000618999 KRTAP7-1Q8IUC3 87 aa4.33□□□□□ -1.72
SRGAP3-213ENST00000618999 LCA10Q71F78 164 aa4.32□□□□□ -1.72
SRGAP3-213ENST00000618999 Q5VV11 94 aa4.32□□□□□ -1.72
SRGAP3-213ENST00000618999 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
SRGAP3-213ENST00000618999 C9orf163Q8N9P6 203 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms