RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 OCR1Q9BZK8 76 aa8.83□□□□□ -1
CNOT3-210ENST00000618939 A0A087WTM6 91 aa8.82□□□□□ -1
CNOT3-210ENST00000618939 SPRR4Q96PI1 79 aa8.82□□□□□ -1
CNOT3-210ENST00000618939 CYSTM1Q9H1C7 97 aa8.81□□□□□ -1
CNOT3-210ENST00000618939 SPACA4Q8TDM5 124 aa8.81□□□□□ -1
CNOT3-210ENST00000618939 DMDP11532 3685 aa8.8□□□□□ -1
CNOT3-210ENST00000618939 SPRR1AP35321 89 aa8.8□□□□□ -1
CNOT3-210ENST00000618939 MRPL34Q9BQ48 92 aaKnown RBP8.8□□□□□ -1
CNOT3-210ENST00000618939 RELNP78509 3460 aa8.79□□□□□ -1
CNOT3-210ENST00000618939 ZNF861PO60384 105 aa8.79□□□□□ -1
CNOT3-210ENST00000618939 DSCR10P59022 87 aa8.79□□□□□ -1
CNOT3-210ENST00000618939 ASPMQ8IZT6 3477 aa8.79□□□□□ -1
CNOT3-210ENST00000618939 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
CNOT3-210ENST00000618939 IGKV2-30P06310 120 aa8.79□□□□□ -1
CNOT3-210ENST00000618939 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
CNOT3-210ENST00000618939 NF1P21359 2839 aa8.78□□□□□ -1
CNOT3-210ENST00000618939 NBEAL1Q6ZS30 2694 aa8.78□□□□□ -1
CNOT3-210ENST00000618939 CRYBG3Q68DQ2 2970 aa8.77□□□□□ -1.01
CNOT3-210ENST00000618939 DCHS2Q6V1P9 2916 aa8.77□□□□□ -1.01
CNOT3-210ENST00000618939 SPAG11AQ6PDA7 123 aa8.77□□□□□ -1.01
CNOT3-210ENST00000618939 DCHS1Q96JQ0 3298 aa8.76□□□□□ -1.01
CNOT3-210ENST00000618939 FBN2P35556 2912 aa8.76□□□□□ -1.01
CNOT3-210ENST00000618939 LINC00313P59037 77 aa8.76□□□□□ -1.01
CNOT3-210ENST00000618939 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
CNOT3-210ENST00000618939 LAMA5O15230 3695 aa8.75□□□□□ -1.01
CNOT3-210ENST00000618939 ANAPC11Q9NYG5 84 aa8.75□□□□□ -1.01
CNOT3-210ENST00000618939 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
CNOT3-210ENST00000618939 CELSR2Q9HCU4 2923 aa8.75□□□□□ -1.01
CNOT3-210ENST00000618939 A0A1B0GVX0 72 aa8.74□□□□□ -1.01
CNOT3-210ENST00000618939 ACYP2P14621 99 aa8.74□□□□□ -1.01
CNOT3-210ENST00000618939 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
CNOT3-210ENST00000618939 LOC101927531A0A1B0GV80 90 aa8.74□□□□□ -1.01
CNOT3-210ENST00000618939 SPINK1P00995 79 aa8.73□□□□□ -1.01
CNOT3-210ENST00000618939 NSD1Q96L73 2696 aaPredicted RBP8.73□□□□□ -1.01
CNOT3-210ENST00000618939 A8MUN3 132 aa8.73□□□□□ -1.01
CNOT3-210ENST00000618939 NIPBLQ6KC79 2804 aaeCLIP8.73□□□□□ -1.01
CNOT3-210ENST00000618939 COA5Q86WW8 74 aa8.72□□□□□ -1.01
CNOT3-210ENST00000618939 C8orf87E5RJ46 101 aa8.72□□□□□ -1.01
CNOT3-210ENST00000618939 HIVEP1P15822 2718 aa8.71□□□□□ -1.02
CNOT3-210ENST00000618939 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
CNOT3-210ENST00000618939 TYMSOSQ8TAI1 123 aa8.69□□□□□ -1.02
CNOT3-210ENST00000618939 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
CNOT3-210ENST00000618939 WWC2-AS2Q96NR7 200 aa8.68□□□□□ -1.02
CNOT3-210ENST00000618939 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
CNOT3-210ENST00000618939 KRTAP1-5Q9BYS1 174 aa8.68□□□□□ -1.02
CNOT3-210ENST00000618939 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
CNOT3-210ENST00000618939 C7orf65Q6ZTY9 151 aa8.66□□□□□ -1.02
CNOT3-210ENST00000618939 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.66□□□□□ -1.02
CNOT3-210ENST00000618939 A0A1B0GU69 56 aa8.66□□□□□ -1.02
CNOT3-210ENST00000618939 SPANXA2-OT1Q8N9U9 137 aa8.64□□□□□ -1.03
CNOT3-210ENST00000618939 PLA2G1BP04054 148 aaKnown RBP8.63□□□□□ -1.03
CNOT3-210ENST00000618939 TNP2Q05952 138 aa8.62□□□□□ -1.03
CNOT3-210ENST00000618939 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
CNOT3-210ENST00000618939 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
CNOT3-210ENST00000618939 CYP4F30PQ9H0H9 118 aa8.61□□□□□ -1.03
CNOT3-210ENST00000618939 SPRR1BP22528 89 aa8.6□□□□□ -1.03
CNOT3-210ENST00000618939 Q96NJ1 140 aa8.59□□□□□ -1.03
CNOT3-210ENST00000618939 Q5XG85 94 aa8.59□□□□□ -1.03
CNOT3-210ENST00000618939 OXTP01178 125 aa8.56□□□□□ -1.04
CNOT3-210ENST00000618939 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
CNOT3-210ENST00000618939 LINC00472Q9H8W2 130 aa8.54□□□□□ -1.04
CNOT3-210ENST00000618939 MMP24-AS1A0A0U1RRL7 71 aa8.54□□□□□ -1.04
CNOT3-210ENST00000618939 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
CNOT3-210ENST00000618939 KMT2BQ9UMN6 2715 aaPredicted RBP8.54□□□□□ -1.04
CNOT3-210ENST00000618939 FAM229BQ4G0N7 80 aa8.52□□□□□ -1.04
CNOT3-210ENST00000618939 STAB2Q8WWQ8 2551 aa8.52□□□□□ -1.05
CNOT3-210ENST00000618939 Q1T7F1 81 aa8.51□□□□□ -1.05
CNOT3-210ENST00000618939 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
CNOT3-210ENST00000618939 LINC00304Q8N9R0 145 aa8.48□□□□□ -1.05
CNOT3-210ENST00000618939 CD164Q04900 197 aa8.48□□□□□ -1.05
CNOT3-210ENST00000618939 IGLV7-46A0A075B6I9 117 aa8.48□□□□□ -1.05
CNOT3-210ENST00000618939 ATP11AUNQ6ZP68 121 aa8.47□□□□□ -1.05
CNOT3-210ENST00000618939 CSMD1Q96PZ7 3565 aa8.46□□□□□ -1.05
CNOT3-210ENST00000618939 KRTAP7-1Q8IUC3 87 aa8.45□□□□□ -1.06
CNOT3-210ENST00000618939 PANO1I0J062 215 aa8.43□□□□□ -1.06
CNOT3-210ENST00000618939 SMR3BP02814 79 aaPredicted RBP8.42□□□□□ -1.06
CNOT3-210ENST00000618939 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
CNOT3-210ENST00000618939 CELSR1Q9NYQ6 3014 aa8.41□□□□□ -1.06
CNOT3-210ENST00000618939 UQCR11O14957 56 aa8.41□□□□□ -1.06
CNOT3-210ENST00000618939 Q8N9P0 234 aaPredicted RBP8.38□□□□□ -1.07
CNOT3-210ENST00000618939 C9orf92A6NGG3 77 aa8.37□□□□□ -1.07
CNOT3-210ENST00000618939 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
CNOT3-210ENST00000618939 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
CNOT3-210ENST00000618939 LINC00483Q53H64 154 aa8.34□□□□□ -1.07
CNOT3-210ENST00000618939 ZCCHC13Q8WW36 166 aaKnown RBP8.34□□□□□ -1.07
CNOT3-210ENST00000618939 HRES1P13985 223 aa8.34□□□□□ -1.07
CNOT3-210ENST00000618939 CDC42SE1Q9NRR8 79 aa8.34□□□□□ -1.07
CNOT3-210ENST00000618939 MIR22HGQ0VDD5 57 aa8.33□□□□□ -1.08
CNOT3-210ENST00000618939 Q8N1X5 172 aa8.3□□□□□ -1.08
CNOT3-210ENST00000618939 SVEP1Q4LDE5 3571 aa8.3□□□□□ -1.08
CNOT3-210ENST00000618939 Q75L30 129 aa8.3□□□□□ -1.08
CNOT3-210ENST00000618939 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
CNOT3-210ENST00000618939 LINC01558Q9Y6Z2 57 aa8.28□□□□□ -1.08
CNOT3-210ENST00000618939 Q6ZR54 194 aa8.28□□□□□ -1.08
CNOT3-210ENST00000618939 KTN1-AS1Q86SY8 53 aa8.28□□□□□ -1.08
CNOT3-210ENST00000618939 Q5VV11 94 aa8.27□□□□□ -1.09
CNOT3-210ENST00000618939 TENM3Q9P273 2699 aa8.27□□□□□ -1.09
CNOT3-210ENST00000618939 LCE6AA0A183 80 aa8.25□□□□□ -1.09
CNOT3-210ENST00000618939 Q5W150 140 aa8.25□□□□□ -1.09
CNOT3-210ENST00000618939 J3QL48 77 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms