RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 C4orf48Q5BLP8 95 aa13.19□□□□□ -0.3
PCSK6-217ENST00000618548 SVEP1Q4LDE5 3571 aa13.18□□□□□ -0.3
PCSK6-217ENST00000618548 TLX1NBP0CAT3 122 aa13.18□□□□□ -0.3
PCSK6-217ENST00000618548 CUBNO60494 3623 aa13.17□□□□□ -0.3
PCSK6-217ENST00000618548 SPRR4Q96PI1 79 aa13.17□□□□□ -0.3
PCSK6-217ENST00000618548 COL6A5A8TX70 2615 aa13.17□□□□□ -0.3
PCSK6-217ENST00000618548 APCP25054 2843 aa13.16□□□□□ -0.3
PCSK6-217ENST00000618548 PLA2G2DQ9UNK4 145 aa13.16□□□□□ -0.3
PCSK6-217ENST00000618548 KRTAP1-1Q07627 177 aa13.16□□□□□ -0.3
PCSK6-217ENST00000618548 MOBPQ13875 183 aa13.15□□□□□ -0.3
PCSK6-217ENST00000618548 SPENQ96T58 3664 aaKnown RBP13.15□□□□□ -0.3
PCSK6-217ENST00000618548 LOC101927531A0A1B0GV80 90 aa13.14□□□□□ -0.31
PCSK6-217ENST00000618548 CELSR1Q9NYQ6 3014 aa13.14□□□□□ -0.31
PCSK6-217ENST00000618548 CD164Q04900 197 aa13.13□□□□□ -0.31
PCSK6-217ENST00000618548 MXRA5Q9NR99 2828 aa13.11□□□□□ -0.31
PCSK6-217ENST00000618548 ATP11AUNQ6ZP68 121 aa13.1□□□□□ -0.31
PCSK6-217ENST00000618548 KRTAP10-11P60412 298 aa13.08□□□□□ -0.32
PCSK6-217ENST00000618548 SPANXA2-OT1Q8N9U9 137 aa13.07□□□□□ -0.32
PCSK6-217ENST00000618548 KTN1-AS1Q86SY8 53 aa13.06□□□□□ -0.32
PCSK6-217ENST00000618548 A0A1B0GU69 56 aa13.05□□□□□ -0.32
PCSK6-217ENST00000618548 ACYP2P14621 99 aa13.05□□□□□ -0.32
PCSK6-217ENST00000618548 SPINK1P00995 79 aa13.04□□□□□ -0.32
PCSK6-217ENST00000618548 NBEAL1Q6ZS30 2694 aa13.02□□□□□ -0.32
PCSK6-217ENST00000618548 IGLV5-37A0A075B6J1 123 aa13.01□□□□□ -0.33
PCSK6-217ENST00000618548 C8orf17Q9NRJ1 99 aa13.01□□□□□ -0.33
PCSK6-217ENST00000618548 MRPL34Q9BQ48 92 aaKnown RBP13□□□□□ -0.33
PCSK6-217ENST00000618548 HIVEP1P15822 2718 aa13□□□□□ -0.33
PCSK6-217ENST00000618548 Q8N9P0 234 aaPredicted RBP12.99□□□□□ -0.33
PCSK6-217ENST00000618548 IGKV2D-30A0A075B6S6 120 aa12.97□□□□□ -0.33
PCSK6-217ENST00000618548 IGKV2-30P06310 120 aa12.97□□□□□ -0.33
PCSK6-217ENST00000618548 ITPR2Q14571 2701 aa12.97□□□□□ -0.33
PCSK6-217ENST00000618548 SPRR1AP35321 89 aa12.96□□□□□ -0.33
PCSK6-217ENST00000618548 KRTAP26-1Q6PEX3 210 aa12.96□□□□□ -0.33
PCSK6-217ENST00000618548 STAB1Q9NY15 2570 aa12.95□□□□□ -0.34
PCSK6-217ENST00000618548 Q5VV11 94 aa12.94□□□□□ -0.34
PCSK6-217ENST00000618548 CNBPP62633 177 aaKnown RBP12.92□□□□□ -0.34
PCSK6-217ENST00000618548 KRTAP24-1Q3LI83 254 aa12.92□□□□□ -0.34
PCSK6-217ENST00000618548 CDC42SE1Q9NRR8 79 aa12.9□□□□□ -0.34
PCSK6-217ENST00000618548 C7orf65Q6ZTY9 151 aa12.9□□□□□ -0.34
PCSK6-217ENST00000618548 A0A1B0GVX0 72 aa12.9□□□□□ -0.34
PCSK6-217ENST00000618548 IGLV8-61A0A075B6I0 122 aa12.89□□□□□ -0.35
PCSK6-217ENST00000618548 TNP2Q05952 138 aa12.89□□□□□ -0.35
PCSK6-217ENST00000618548 ANAPC11Q9NYG5 84 aa12.89□□□□□ -0.35
PCSK6-217ENST00000618548 IGLV5-52A0A0A0MRZ9 124 aa12.88□□□□□ -0.35
PCSK6-217ENST00000618548 PRR26Q8N8Z3 221 aa12.88□□□□□ -0.35
PCSK6-217ENST00000618548 MDFIQ99750 246 aa12.87□□□□□ -0.35
PCSK6-217ENST00000618548 IGLV7-46A0A075B6I9 117 aa12.86□□□□□ -0.35
PCSK6-217ENST00000618548 NUPR2A6NF83 97 aa12.84□□□□□ -0.35
PCSK6-217ENST00000618548 NSD1Q96L73 2696 aaPredicted RBP12.84□□□□□ -0.35
PCSK6-217ENST00000618548 RBM12B-AS1Q9P1G2 102 aa12.84□□□□□ -0.35
PCSK6-217ENST00000618548 C8orf87E5RJ46 101 aa12.83□□□□□ -0.36
PCSK6-217ENST00000618548 ZCCHC13Q8WW36 166 aaKnown RBP12.83□□□□□ -0.36
PCSK6-217ENST00000618548 K7ERS5 55 aa12.83□□□□□ -0.36
PCSK6-217ENST00000618548 NIPBLQ6KC79 2804 aaeCLIP12.82□□□□□ -0.36
PCSK6-217ENST00000618548 C9orf163Q8N9P6 203 aa12.82□□□□□ -0.36
PCSK6-217ENST00000618548 NBDYA0A0U1RRE5 68 aa12.81□□□□□ -0.36
PCSK6-217ENST00000618548 Q75L30 129 aa12.81□□□□□ -0.36
PCSK6-217ENST00000618548 LY6G6CO95867 125 aa12.8□□□□□ -0.36
PCSK6-217ENST00000618548 LINC00313P59037 77 aa12.79□□□□□ -0.36
PCSK6-217ENST00000618548 KRTAP4-16G5E9R7 235 aaPredicted RBP12.79□□□□□ -0.36
PCSK6-217ENST00000618548 MMP24-AS1A0A0U1RRL7 71 aa12.78□□□□□ -0.36
PCSK6-217ENST00000618548 LCA10Q71F78 164 aa12.76□□□□□ -0.37
PCSK6-217ENST00000618548 SPACA4Q8TDM5 124 aa12.75□□□□□ -0.37
PCSK6-217ENST00000618548 LINC00472Q9H8W2 130 aa12.75□□□□□ -0.37
PCSK6-217ENST00000618548 UQCR11O14957 56 aa12.73□□□□□ -0.37
PCSK6-217ENST00000618548 FAM229AH3BQW9 127 aa12.72□□□□□ -0.37
PCSK6-217ENST00000618548 K7EIL1 84 aa12.71□□□□□ -0.37
PCSK6-217ENST00000618548 RTL8CO15255 209 aa12.71□□□□□ -0.37
PCSK6-217ENST00000618548 LINC01558Q9Y6Z2 57 aa12.69□□□□□ -0.38
PCSK6-217ENST00000618548 A8MU10 97 aa12.68□□□□□ -0.38
PCSK6-217ENST00000618548 MIR22HGQ0VDD5 57 aa12.68□□□□□ -0.38
PCSK6-217ENST00000618548 C1orf134Q5TEV5 83 aa12.66□□□□□ -0.38
PCSK6-217ENST00000618548 LCE6AA0A183 80 aa12.66□□□□□ -0.38
PCSK6-217ENST00000618548 SPINK7P58062 85 aa12.66□□□□□ -0.38
PCSK6-217ENST00000618548 KRTAP29-1A8MX34 341 aaPredicted RBP12.65□□□□□ -0.38
PCSK6-217ENST00000618548 ZNF861PO60384 105 aa12.65□□□□□ -0.38
PCSK6-217ENST00000618548 HRES1P13985 223 aa12.65□□□□□ -0.39
PCSK6-217ENST00000618548 PSORS1C2Q9UIG4 136 aa12.64□□□□□ -0.39
PCSK6-217ENST00000618548 STAB2Q8WWQ8 2551 aa12.61□□□□□ -0.39
PCSK6-217ENST00000618548 PRAC1Q96KF2 57 aa12.59□□□□□ -0.39
PCSK6-217ENST00000618548 SPRR1BP22528 89 aa12.58□□□□□ -0.4
PCSK6-217ENST00000618548 KRTAP7-1Q8IUC3 87 aa12.56□□□□□ -0.4
PCSK6-217ENST00000618548 KRTAP1-5Q9BYS1 174 aa12.54□□□□□ -0.4
PCSK6-217ENST00000618548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.53□□□□□ -0.4
PCSK6-217ENST00000618548 Q96NJ1 140 aa12.51□□□□□ -0.41
PCSK6-217ENST00000618548 A0A087WTM6 91 aa12.51□□□□□ -0.41
PCSK6-217ENST00000618548 APLNQ9ULZ1 77 aa12.51□□□□□ -0.41
PCSK6-217ENST00000618548 SSBP3-AS1Q7Z2R9 100 aa12.49□□□□□ -0.41
PCSK6-217ENST00000618548 IGLV7-43P04211 117 aa12.42□□□□□ -0.42
PCSK6-217ENST00000618548 FLG2Q5D862 2391 aaPredicted RBP12.42□□□□□ -0.42
PCSK6-217ENST00000618548 KRTAP11-1Q8IUC1 163 aa12.4□□□□□ -0.42
PCSK6-217ENST00000618548 TYMSOSQ8TAI1 123 aa12.39□□□□□ -0.43
PCSK6-217ENST00000618548 Q8N1X5 172 aa12.37□□□□□ -0.43
PCSK6-217ENST00000618548 LINC01554Q52M75 96 aa12.36□□□□□ -0.43
PCSK6-217ENST00000618548 Q6ZR54 194 aa12.35□□□□□ -0.43
PCSK6-217ENST00000618548 VWFP04275 2813 aa12.35□□□□□ -0.43
PCSK6-217ENST00000618548 PANO1I0J062 215 aa12.34□□□□□ -0.43
PCSK6-217ENST00000618548 TENM3Q9P273 2699 aa12.34□□□□□ -0.43
PCSK6-217ENST00000618548 A0A087X002 238 aa12.32□□□□□ -0.44
PCSK6-217ENST00000618548 PLA2G1BP04054 148 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms