RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 A0A0G2JQZ4 141 aa2.23□□□□□ -2.05
SNCA-213ENST00000618500 HRES1P13985 223 aa2.23□□□□□ -2.05
SNCA-213ENST00000618500 NDUFA5Q16718 116 aa2.23□□□□□ -2.05
SNCA-213ENST00000618500 MEIG1Q5JSS6 88 aa2.23□□□□□ -2.05
SNCA-213ENST00000618500 RBM12B-AS1Q9P1G2 102 aa2.23□□□□□ -2.05
SNCA-213ENST00000618500 LEPROTO15243 131 aa2.22□□□□□ -2.05
SNCA-213ENST00000618500 S100A7L2Q5SY68 101 aa2.22□□□□□ -2.05
SNCA-213ENST00000618500 Q6JHZ5 121 aa2.22□□□□□ -2.05
SNCA-213ENST00000618500 SPANXDQ9BXN6 97 aa2.22□□□□□ -2.05
SNCA-213ENST00000618500 TMEM170BQ5T4T1 132 aa2.22□□□□□ -2.05
SNCA-213ENST00000618500 HRCT1Q6UXD1 115 aa2.22□□□□□ -2.05
SNCA-213ENST00000618500 TRBV7-7A0A0K0K1E9 115 aa2.21□□□□□ -2.06
SNCA-213ENST00000618500 TIMM17BO60830 172 aa2.21□□□□□ -2.06
SNCA-213ENST00000618500 C12orf57Q99622 126 aa2.21□□□□□ -2.06
SNCA-213ENST00000618500 SMCO4Q9NRQ5 59 aa2.21□□□□□ -2.06
SNCA-213ENST00000618500 HSBP1O75506 76 aa2.21□□□□□ -2.06
SNCA-213ENST00000618500 LGALS3P17931 250 aaKnown RBP2.21□□□□□ -2.06
SNCA-213ENST00000618500 COX7BP24311 80 aa2.2□□□□□ -2.06
SNCA-213ENST00000618500 IGFL1Q6UW32 110 aa2.2□□□□□ -2.06
SNCA-213ENST00000618500 SMIM20Q8N5G0 67 aa2.2□□□□□ -2.06
SNCA-213ENST00000618500 A0A1B0GWB2 263 aa2.2□□□□□ -2.06
SNCA-213ENST00000618500 PPDPFLQ8WWR9 84 aa2.2□□□□□ -2.06
SNCA-213ENST00000618500 A0A1B0GV72 72 aa2.2□□□□□ -2.06
SNCA-213ENST00000618500 MTURNQ8N3F0 131 aa2.2□□□□□ -2.06
SNCA-213ENST00000618500 VAMP3Q15836 100 aa2.19□□□□□ -2.06
SNCA-213ENST00000618500 SEC11CQ9BY50 192 aa2.19□□□□□ -2.06
SNCA-213ENST00000618500 NHP2Q9NX24 153 aaKnown RBP2.19□□□□□ -2.06
SNCA-213ENST00000618500 SPANXCQ9NY87 97 aa2.19□□□□□ -2.06
SNCA-213ENST00000618500 LINC00614P0C842 121 aa2.19□□□□□ -2.06
SNCA-213ENST00000618500 FABP9Q0Z7S8 132 aa2.19□□□□□ -2.06
SNCA-213ENST00000618500 OBSCN-AS1Q96MR7 158 aa2.19□□□□□ -2.06
SNCA-213ENST00000618500 MIEN1Q9BRT3 115 aa2.19□□□□□ -2.06
SNCA-213ENST00000618500 A0A0J9YXY3 114 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 FAM236DA0A1B0GTK5 79 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 APOC3P02656 99 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 FAM236CP0DP71 79 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 TAL2Q16559 108 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 CLEC2BQ92478 149 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 PRAC1Q96KF2 57 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 RHEBQ15382 184 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 Q6ZVH6 145 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 CHCHD1Q96BP2 118 aaKnown RBP2.18□□□□□ -2.06
SNCA-213ENST00000618500 VPS25Q9BRG1 176 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 KRTAP2-2Q9BYT5 123 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 KRTAP2-1Q9BYU5 128 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 SS18L2Q9UHA2 77 aa2.18□□□□□ -2.06
SNCA-213ENST00000618500 IGKV2D-30A0A075B6S6 120 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 PLNP26678 52 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 TSPEAR-AS2P59090 65 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 NOTCH2NLQ7Z3S9 236 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 PCP2Q8IVA1 136 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 MUC12Q9UKN1 5478 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 Q6ZVQ6 151 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 C18orf32Q8TCD1 76 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 KRTAP16-1A8MUX0 517 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 Q96NJ1 140 aa2.17□□□□□ -2.06
SNCA-213ENST00000618500 TRAV13-2A0A0B4J235 113 aa2.16□□□□□ -2.06
SNCA-213ENST00000618500 KRTAP10-5P60370 271 aa2.16□□□□□ -2.06
SNCA-213ENST00000618500 HERVK_113P61574 105 aa2.16□□□□□ -2.06
SNCA-213ENST00000618500 J3QQQ9 107 aa2.16□□□□□ -2.06
SNCA-213ENST00000618500 C4orf26Q17RF5 130 aa2.16□□□□□ -2.06
SNCA-213ENST00000618500 IFI27L1Q96BM0 104 aa2.16□□□□□ -2.06
SNCA-213ENST00000618500 LITAFQ99732 161 aa2.16□□□□□ -2.06
SNCA-213ENST00000618500 S100PP25815 95 aa2.15□□□□□ -2.06
SNCA-213ENST00000618500 FAM218AQ96MZ4 157 aa2.15□□□□□ -2.06
SNCA-213ENST00000618500 F8WEM9 126 aa2.15□□□□□ -2.07
SNCA-213ENST00000618500 LST1O00453 97 aa2.15□□□□□ -2.07
SNCA-213ENST00000618500 KRTAP19-8Q3LI54 63 aa2.15□□□□□ -2.07
SNCA-213ENST00000618500 LINC00308Q8TCZ7 52 aa2.15□□□□□ -2.07
SNCA-213ENST00000618500 COPS9Q8WXC6 57 aa2.15□□□□□ -2.07
SNCA-213ENST00000618500 RPS10P5Q9NQ39 176 aa2.15□□□□□ -2.07
SNCA-213ENST00000618500 A6NN06 94 aa2.14□□□□□ -2.07
SNCA-213ENST00000618500 E9PLD3 99 aa2.13□□□□□ -2.07
SNCA-213ENST00000618500 ADAMTSL4-AS1Q5T5F5 129 aa2.13□□□□□ -2.07
SNCA-213ENST00000618500 SIGMAR1Q99720 223 aa2.13□□□□□ -2.07
SNCA-213ENST00000618500 KMT2DO14686 5537 aa2.13□□□□□ -2.07
SNCA-213ENST00000618500 TSTD3H0UI37 97 aa2.12□□□□□ -2.07
SNCA-213ENST00000618500 NAA38Q9BRA0 125 aaKnown RBP2.12□□□□□ -2.07
SNCA-213ENST00000618500 MT1BP07438 61 aa2.12□□□□□ -2.07
SNCA-213ENST00000618500 BATFQ16520 125 aa2.12□□□□□ -2.07
SNCA-213ENST00000618500 Q8N9P0 234 aaPredicted RBP2.12□□□□□ -2.07
SNCA-213ENST00000618500 DEFB105AQ8NG35 78 aa2.12□□□□□ -2.07
SNCA-213ENST00000618500 DLEU1O43261 78 aa2.12□□□□□ -2.07
SNCA-213ENST00000618500 DPM2O94777 84 aa2.12□□□□□ -2.07
SNCA-213ENST00000618500 IFITM1P13164 125 aa2.12□□□□□ -2.07
SNCA-213ENST00000618500 OCIAD2Q56VL3 154 aa2.12□□□□□ -2.07
SNCA-213ENST00000618500 C14orf144Q96I85 54 aa2.11□□□□□ -2.07
SNCA-213ENST00000618500 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
SNCA-213ENST00000618500 PMCHL1Q16048 86 aa2.11□□□□□ -2.07
SNCA-213ENST00000618500 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
SNCA-213ENST00000618500 Q5VV11 94 aa2.1□□□□□ -2.07
SNCA-213ENST00000618500 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.1□□□□□ -2.07
SNCA-213ENST00000618500 SPRR2GQ9BYE4 73 aa2.1□□□□□ -2.07
SNCA-213ENST00000618500 IGKCP01834 107 aa2.1□□□□□ -2.07
SNCA-213ENST00000618500 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
SNCA-213ENST00000618500 LINC00575Q6W349 94 aa2.1□□□□□ -2.07
SNCA-213ENST00000618500 TEN1Q86WV5 123 aa2.1□□□□□ -2.07
SNCA-213ENST00000618500 OR13C6PQ8NH95 151 aa2.1□□□□□ -2.07
SNCA-213ENST00000618500 TRAPPC1Q9Y5R8 145 aa2.1□□□□□ -2.07
SNCA-213ENST00000618500 C8orf87E5RJ46 101 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms