RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 TRBV7-7A0A0K0K1E9 115 aa12.67□□□□□ -0.38
SDHA-220ENST00000617470 LINC00643Q86TS7 51 aa12.66□□□□□ -0.38
SDHA-220ENST00000617470 SMR3BP02814 79 aaPredicted RBP12.65□□□□□ -0.38
SDHA-220ENST00000617470 DSCR8Q96T75 97 aa12.65□□□□□ -0.38
SDHA-220ENST00000617470 C3orf22Q8N5N4 141 aa12.63□□□□□ -0.39
SDHA-220ENST00000617470 ANAPC13Q9BS18 74 aa12.61□□□□□ -0.39
SDHA-220ENST00000617470 H0Y9J4 135 aa12.6□□□□□ -0.39
SDHA-220ENST00000617470 PDE6GP18545 87 aa12.6□□□□□ -0.39
SDHA-220ENST00000617470 IMUPQ9GZP8 106 aa12.6□□□□□ -0.39
SDHA-220ENST00000617470 HIGD2AQ9BW72 106 aa12.59□□□□□ -0.39
SDHA-220ENST00000617470 BIRC6Q9NR09 4857 aa12.57□□□□□ -0.4
SDHA-220ENST00000617470 BCE1O60756 84 aa12.57□□□□□ -0.4
SDHA-220ENST00000617470 SMIM29Q86T20 159 aa12.57□□□□□ -0.4
SDHA-220ENST00000617470 KRTAP13-1Q8IUC0 172 aa12.57□□□□□ -0.4
SDHA-220ENST00000617470 KIAA1109Q2LD37 5005 aa12.56□□□□□ -0.4
SDHA-220ENST00000617470 SRRM2Q9UQ35 2752 aaKnown RBP12.56□□□□□ -0.4
SDHA-220ENST00000617470 RYR1P21817 5038 aa12.54□□□□□ -0.4
SDHA-220ENST00000617470 HSPG2P98160 4391 aa12.53□□□□□ -0.4
SDHA-220ENST00000617470 UBE2AP49459 152 aa12.52□□□□□ -0.4
SDHA-220ENST00000617470 PSORS1C2Q9UIG4 136 aa12.52□□□□□ -0.4
SDHA-220ENST00000617470 Q6JHZ5 121 aa12.51□□□□□ -0.41
SDHA-220ENST00000617470 RPL37AP61513 92 aaKnown RBP12.5□□□□□ -0.41
SDHA-220ENST00000617470 C1orf137Q5JT78 98 aa12.5□□□□□ -0.41
SDHA-220ENST00000617470 FAM229AH3BQW9 127 aa12.49□□□□□ -0.41
SDHA-220ENST00000617470 IGKV3D-7A0A0C4DH55 119 aa12.48□□□□□ -0.41
SDHA-220ENST00000617470 UBL5Q9BZL1 73 aa12.47□□□□□ -0.41
SDHA-220ENST00000617470 FAM236AA0A1B0GUQ0 79 aa12.46□□□□□ -0.41
SDHA-220ENST00000617470 FAM236BA0A1B0GV22 79 aa12.46□□□□□ -0.41
SDHA-220ENST00000617470 SPRR1BP22528 89 aa12.46□□□□□ -0.41
SDHA-220ENST00000617470 A0A1W2PNM2 257 aa12.45□□□□□ -0.42
SDHA-220ENST00000617470 Q5VSD8 79 aa12.45□□□□□ -0.42
SDHA-220ENST00000617470 Q6ZVQ6 151 aa12.45□□□□□ -0.42
SDHA-220ENST00000617470 FAT1Q14517 4588 aa12.45□□□□□ -0.42
SDHA-220ENST00000617470 Q8N1X5 172 aa12.43□□□□□ -0.42
SDHA-220ENST00000617470 PLA2G1BP04054 148 aaKnown RBP12.43□□□□□ -0.42
SDHA-220ENST00000617470 VPS13BQ7Z7G8 4022 aa12.42□□□□□ -0.42
SDHA-220ENST00000617470 KRTAP17-1Q9BYP8 105 aa12.42□□□□□ -0.42
SDHA-220ENST00000617470 IGLV8-61A0A075B6I0 122 aa12.41□□□□□ -0.42
SDHA-220ENST00000617470 A0A0G2JQZ4 141 aa12.4□□□□□ -0.42
SDHA-220ENST00000617470 CCDC179H3BU77 68 aa12.39□□□□□ -0.43
SDHA-220ENST00000617470 IGLV7-43P04211 117 aa12.39□□□□□ -0.43
SDHA-220ENST00000617470 ATP5EP2Q5VTU8 51 aa12.39□□□□□ -0.43
SDHA-220ENST00000617470 Q8NBF4 154 aa12.39□□□□□ -0.43
SDHA-220ENST00000617470 F8WEM9 126 aa12.38□□□□□ -0.43
SDHA-220ENST00000617470 HIST1H4AP62805 103 aaKnown RBP12.38□□□□□ -0.43
SDHA-220ENST00000617470 IGFL1Q6UW32 110 aa12.38□□□□□ -0.43
SDHA-220ENST00000617470 SPRR4Q96PI1 79 aa12.36□□□□□ -0.43
SDHA-220ENST00000617470 KRTAP10-4P60372 401 aaPredicted RBP12.36□□□□□ -0.43
SDHA-220ENST00000617470 ZNF861PO60384 105 aa12.34□□□□□ -0.43
SDHA-220ENST00000617470 A0A087WVE0 104 aa12.34□□□□□ -0.43
SDHA-220ENST00000617470 A0A1B0GW54 56 aa12.32□□□□□ -0.44
SDHA-220ENST00000617470 CRYGAP11844 174 aa12.31□□□□□ -0.44
SDHA-220ENST00000617470 LINC00483Q53H64 154 aa12.31□□□□□ -0.44
SDHA-220ENST00000617470 CXCL6P80162 114 aa12.3□□□□□ -0.44
SDHA-220ENST00000617470 NREPQ16612 68 aa12.29□□□□□ -0.44
SDHA-220ENST00000617470 HERC2O95714 4834 aa12.28□□□□□ -0.44
SDHA-220ENST00000617470 ATOX1O00244 68 aa12.27□□□□□ -0.44
SDHA-220ENST00000617470 KRTAP4-5Q9BYR2 181 aa12.27□□□□□ -0.44
SDHA-220ENST00000617470 SPINK6Q6UWN8 80 aa12.25□□□□□ -0.45
SDHA-220ENST00000617470 ZNF706Q9Y5V0 76 aaPredicted RBP12.25□□□□□ -0.45
SDHA-220ENST00000617470 ANAPC11Q9NYG5 84 aa12.23□□□□□ -0.45
SDHA-220ENST00000617470 IGLV9-49A0A0B4J1Y8 123 aa12.21□□□□□ -0.46
SDHA-220ENST00000617470 UQCRQO14949 82 aa12.21□□□□□ -0.46
SDHA-220ENST00000617470 COX7CP15954 63 aa12.19□□□□□ -0.46
SDHA-220ENST00000617470 A0A087WSZ3 146 aa12.18□□□□□ -0.46
SDHA-220ENST00000617470 BPY2O14599 106 aa12.18□□□□□ -0.46
SDHA-220ENST00000617470 Q8N9L7 120 aa12.18□□□□□ -0.46
SDHA-220ENST00000617470 C9orf153Q5TBE3 101 aa12.16□□□□□ -0.46
SDHA-220ENST00000617470 SS18L2Q9UHA2 77 aa12.16□□□□□ -0.46
SDHA-220ENST00000617470 IGKV4-1P06312 121 aa12.14□□□□□ -0.47
SDHA-220ENST00000617470 SERP2Q8N6R1 65 aa12.13□□□□□ -0.47
SDHA-220ENST00000617470 PKHD1L1Q86WI1 4243 aa12.12□□□□□ -0.47
SDHA-220ENST00000617470 MOBPQ13875 183 aa12.12□□□□□ -0.47
SDHA-220ENST00000617470 DSCR10P59022 87 aa12.11□□□□□ -0.47
SDHA-220ENST00000617470 ABCA13Q86UQ4 5058 aa12.08□□□□□ -0.48
SDHA-220ENST00000617470 FLG2Q5D862 2391 aaPredicted RBP12.08□□□□□ -0.48
SDHA-220ENST00000617470 KRTAP1-4P0C5Y4 121 aa12.07□□□□□ -0.48
SDHA-220ENST00000617470 DEFB116Q30KQ4 102 aa12.07□□□□□ -0.48
SDHA-220ENST00000617470 LINC00472Q9H8W2 130 aa12.04□□□□□ -0.48
SDHA-220ENST00000617470 HRCT1Q6UXD1 115 aa12.03□□□□□ -0.48
SDHA-220ENST00000617470 K7EQZ3 153 aa12.03□□□□□ -0.48
SDHA-220ENST00000617470 A0A087X002 238 aa12□□□□□ -0.49
SDHA-220ENST00000617470 PRR26Q8N8Z3 221 aa12□□□□□ -0.49
SDHA-220ENST00000617470 FAM229BQ4G0N7 80 aa11.99□□□□□ -0.49
SDHA-220ENST00000617470 MYCBP2O75592 4640 aa11.99□□□□□ -0.49
SDHA-220ENST00000617470 CYSTM1Q9H1C7 97 aa11.98□□□□□ -0.49
SDHA-220ENST00000617470 LRP1Q07954 4544 aaKnown RBP11.97□□□□□ -0.49
SDHA-220ENST00000617470 KRTAP13-2Q52LG2 175 aa11.97□□□□□ -0.49
SDHA-220ENST00000617470 Q96NJ1 140 aa11.97□□□□□ -0.49
SDHA-220ENST00000617470 TRAV7A0A075B6U4 112 aa11.94□□□□□ -0.5
SDHA-220ENST00000617470 OXTP01178 125 aa11.94□□□□□ -0.5
SDHA-220ENST00000617470 SSBP3-AS1Q7Z2R9 100 aa11.94□□□□□ -0.5
SDHA-220ENST00000617470 SMIM20Q8N5G0 67 aa11.94□□□□□ -0.5
SDHA-220ENST00000617470 FAT3Q8TDW7 4589 aa11.93□□□□□ -0.5
SDHA-220ENST00000617470 TYMSOSQ8TAI1 123 aa11.92□□□□□ -0.5
SDHA-220ENST00000617470 A8MWP4 228 aa11.89□□□□□ -0.51
SDHA-220ENST00000617470 PCLOQ9Y6V0 5065 aa11.89□□□□□ -0.51
SDHA-220ENST00000617470 KRTAP29-1A8MX34 341 aaPredicted RBP11.88□□□□□ -0.51
SDHA-220ENST00000617470 CD164Q04900 197 aa11.88□□□□□ -0.51
SDHA-220ENST00000617470 PRR15Q8IV56 129 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms