RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 FAM240AA0A1B0GVK7 77 aa4.83□□□□□ -1.64
NEK3-207ENST00000617054 IGKV3D-7A0A0C4DH55 119 aa4.82□□□□□ -1.64
NEK3-207ENST00000617054 UBE2AP49459 152 aa4.82□□□□□ -1.64
NEK3-207ENST00000617054 ANAPC13Q9BS18 74 aa4.82□□□□□ -1.64
NEK3-207ENST00000617054 CCDC179H3BU77 68 aa4.81□□□□□ -1.64
NEK3-207ENST00000617054 ACYP1P07311 99 aa4.81□□□□□ -1.64
NEK3-207ENST00000617054 Q75L30 129 aa4.81□□□□□ -1.64
NEK3-207ENST00000617054 PSORS1C2Q9UIG4 136 aa4.8□□□□□ -1.64
NEK3-207ENST00000617054 VPS13BQ7Z7G8 4022 aa4.8□□□□□ -1.64
NEK3-207ENST00000617054 TRBV7-4A0A0J9YYF1 115 aa4.8□□□□□ -1.64
NEK3-207ENST00000617054 ANAPC11Q9NYG5 84 aa4.8□□□□□ -1.64
NEK3-207ENST00000617054 KRTAP10-1P60331 282 aa4.79□□□□□ -1.64
NEK3-207ENST00000617054 SMIM29Q86T20 159 aa4.79□□□□□ -1.64
NEK3-207ENST00000617054 C1orf137Q5JT78 98 aa4.79□□□□□ -1.64
NEK3-207ENST00000617054 CIRBP-AS1Q8TBR5 109 aa4.79□□□□□ -1.64
NEK3-207ENST00000617054 LOC110117498A0A087WWA1 95 aa4.78□□□□□ -1.64
NEK3-207ENST00000617054 IGLV5-48A0A075B6I7 105 aa4.78□□□□□ -1.64
NEK3-207ENST00000617054 RYR2Q92736 4967 aa4.78□□□□□ -1.64
NEK3-207ENST00000617054 A0A087WVE0 104 aa4.78□□□□□ -1.64
NEK3-207ENST00000617054 BCE1O60756 84 aa4.78□□□□□ -1.64
NEK3-207ENST00000617054 SCXQ7RTU7 201 aa4.78□□□□□ -1.64
NEK3-207ENST00000617054 LINC00643Q86TS7 51 aa4.78□□□□□ -1.64
NEK3-207ENST00000617054 PLAC8Q9NZF1 115 aa4.78□□□□□ -1.64
NEK3-207ENST00000617054 PRAC1Q96KF2 57 aa4.77□□□□□ -1.65
NEK3-207ENST00000617054 SS18L2Q9UHA2 77 aa4.77□□□□□ -1.65
NEK3-207ENST00000617054 PKIGQ9Y2B9 76 aa4.77□□□□□ -1.65
NEK3-207ENST00000617054 A0A1W2PNM2 257 aa4.76□□□□□ -1.65
NEK3-207ENST00000617054 H3BQ85 93 aa4.76□□□□□ -1.65
NEK3-207ENST00000617054 RYR3Q15413 4870 aa4.76□□□□□ -1.65
NEK3-207ENST00000617054 HIST1H4AP62805 103 aaKnown RBP4.75□□□□□ -1.65
NEK3-207ENST00000617054 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
NEK3-207ENST00000617054 FAM236AA0A1B0GUQ0 79 aa4.75□□□□□ -1.65
NEK3-207ENST00000617054 FAM236BA0A1B0GV22 79 aa4.75□□□□□ -1.65
NEK3-207ENST00000617054 Q6ZVQ6 151 aa4.75□□□□□ -1.65
NEK3-207ENST00000617054 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
NEK3-207ENST00000617054 Q6Q795 121 aa4.75□□□□□ -1.65
NEK3-207ENST00000617054 IGLV9-49A0A0B4J1Y8 123 aa4.74□□□□□ -1.65
NEK3-207ENST00000617054 TRBV7-7A0A0K0K1E9 115 aa4.74□□□□□ -1.65
NEK3-207ENST00000617054 IGFL1Q6UW32 110 aa4.74□□□□□ -1.65
NEK3-207ENST00000617054 LCE6AA0A183 80 aa4.73□□□□□ -1.65
NEK3-207ENST00000617054 DEFB116Q30KQ4 102 aa4.73□□□□□ -1.65
NEK3-207ENST00000617054 Q8N9L7 120 aa4.73□□□□□ -1.65
NEK3-207ENST00000617054 F8WEM9 126 aa4.73□□□□□ -1.65
NEK3-207ENST00000617054 H0Y9J4 135 aa4.73□□□□□ -1.65
NEK3-207ENST00000617054 PDE6GP18545 87 aa4.73□□□□□ -1.65
NEK3-207ENST00000617054 DYNC1H1Q14204 4646 aaKnown RBP4.73□□□□□ -1.65
NEK3-207ENST00000617054 FAT1Q14517 4588 aa4.72□□□□□ -1.65
NEK3-207ENST00000617054 Q6JHZ5 121 aa4.72□□□□□ -1.65
NEK3-207ENST00000617054 HRCT1Q6UXD1 115 aa4.72□□□□□ -1.65
NEK3-207ENST00000617054 ZNF861PO60384 105 aa4.71□□□□□ -1.66
NEK3-207ENST00000617054 NREPQ16612 68 aa4.71□□□□□ -1.66
NEK3-207ENST00000617054 SMR3BP02814 79 aaPredicted RBP4.7□□□□□ -1.66
NEK3-207ENST00000617054 SPRR4Q96PI1 79 aa4.7□□□□□ -1.66
NEK3-207ENST00000617054 IGLV7-43P04211 117 aa4.7□□□□□ -1.66
NEK3-207ENST00000617054 C9orf153Q5TBE3 101 aa4.7□□□□□ -1.66
NEK3-207ENST00000617054 Q6ZSA8 131 aa4.7□□□□□ -1.66
NEK3-207ENST00000617054 Q8NBF4 154 aa4.7□□□□□ -1.66
NEK3-207ENST00000617054 A0A087WSZ3 146 aa4.7□□□□□ -1.66
NEK3-207ENST00000617054 CYSTM1Q9H1C7 97 aa4.69□□□□□ -1.66
NEK3-207ENST00000617054 BPY2O14599 106 aa4.68□□□□□ -1.66
NEK3-207ENST00000617054 SPRR1BP22528 89 aa4.68□□□□□ -1.66
NEK3-207ENST00000617054 MOBPQ13875 183 aa4.68□□□□□ -1.66
NEK3-207ENST00000617054 IMUPQ9GZP8 106 aa4.68□□□□□ -1.66
NEK3-207ENST00000617054 APOBP04114 4563 aaKnown RBP4.67□□□□□ -1.66
NEK3-207ENST00000617054 KRTAP23-1A1A580 65 aa4.66□□□□□ -1.66
NEK3-207ENST00000617054 CRYGAP11844 174 aa4.66□□□□□ -1.66
NEK3-207ENST00000617054 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.66
NEK3-207ENST00000617054 RPL37AP61513 92 aaKnown RBP4.65□□□□□ -1.66
NEK3-207ENST00000617054 A0A1B0GVY2 172 aa4.65□□□□□ -1.67
NEK3-207ENST00000617054 OXTP01178 125 aa4.64□□□□□ -1.67
NEK3-207ENST00000617054 LINC00483Q53H64 154 aa4.64□□□□□ -1.67
NEK3-207ENST00000617054 A0A087X002 238 aa4.63□□□□□ -1.67
NEK3-207ENST00000617054 CXCL6P80162 114 aa4.63□□□□□ -1.67
NEK3-207ENST00000617054 ATP5EP2Q5VTU8 51 aa4.63□□□□□ -1.67
NEK3-207ENST00000617054 LINC00336Q6ZUF6 198 aa4.63□□□□□ -1.67
NEK3-207ENST00000617054 K7EQZ3 153 aa4.63□□□□□ -1.67
NEK3-207ENST00000617054 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
NEK3-207ENST00000617054 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
NEK3-207ENST00000617054 DSCR10P59022 87 aa4.62□□□□□ -1.67
NEK3-207ENST00000617054 SMIM20Q8N5G0 67 aa4.62□□□□□ -1.67
NEK3-207ENST00000617054 ZNF706Q9Y5V0 76 aaPredicted RBP4.62□□□□□ -1.67
NEK3-207ENST00000617054 COX7CP15954 63 aa4.6□□□□□ -1.67
NEK3-207ENST00000617054 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
NEK3-207ENST00000617054 KRTAP13-2Q52LG2 175 aa4.59□□□□□ -1.67
NEK3-207ENST00000617054 UQCRQO14949 82 aa4.59□□□□□ -1.67
NEK3-207ENST00000617054 V9GYY9 64 aa4.59□□□□□ -1.67
NEK3-207ENST00000617054 ATOX1O00244 68 aa4.58□□□□□ -1.68
NEK3-207ENST00000617054 KRTAP1-4P0C5Y4 121 aa4.58□□□□□ -1.68
NEK3-207ENST00000617054 A0A1B0GW54 56 aa4.57□□□□□ -1.68
NEK3-207ENST00000617054 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
NEK3-207ENST00000617054 LINC00472Q9H8W2 130 aa4.57□□□□□ -1.68
NEK3-207ENST00000617054 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
NEK3-207ENST00000617054 HSPG2P98160 4391 aa4.57□□□□□ -1.68
NEK3-207ENST00000617054 WFDC13Q8IUB5 93 aa4.57□□□□□ -1.68
NEK3-207ENST00000617054 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
NEK3-207ENST00000617054 Q96NJ1 140 aa4.56□□□□□ -1.68
NEK3-207ENST00000617054 SERP2Q8N6R1 65 aa4.55□□□□□ -1.68
NEK3-207ENST00000617054 FLG2Q5D862 2391 aaPredicted RBP4.53□□□□□ -1.68
NEK3-207ENST00000617054 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
NEK3-207ENST00000617054 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms