RNA–Protein interactions for RNA: ENST00000617020.1

PCDH9-206, Transcript of protocadherin 9, humanhuman

TSL 5

Gene PCDH9, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-206ENST00000617020 HIST1H2BDP58876 126 aa2.98□□□□□ -1.93
PCDH9-206ENST00000617020 HIST1H2BCP62807 126 aa2.98□□□□□ -1.93
PCDH9-206ENST00000617020 HIST2H2BEQ16778 126 aa2.98□□□□□ -1.93
PCDH9-206ENST00000617020 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.98□□□□□ -1.93
PCDH9-206ENST00000617020 HIST1H2BHQ93079 126 aa2.98□□□□□ -1.93
PCDH9-206ENST00000617020 HIST1H2BNQ99877 126 aa2.98□□□□□ -1.93
PCDH9-206ENST00000617020 HIST1H2BMQ99879 126 aa2.98□□□□□ -1.93
PCDH9-206ENST00000617020 NXT2Q9NPJ8 142 aaKnown RBP2.98□□□□□ -1.93
PCDH9-206ENST00000617020 M0R378 163 aa2.97□□□□□ -1.93
PCDH9-206ENST00000617020 SPRR2EP22531 72 aa2.97□□□□□ -1.93
PCDH9-206ENST00000617020 SPRR2BP35325 72 aa2.97□□□□□ -1.93
PCDH9-206ENST00000617020 SPRR2AP35326 72 aa2.97□□□□□ -1.93
PCDH9-206ENST00000617020 FA2HQ7L5A8 372 aa2.97□□□□□ -1.93
PCDH9-206ENST00000617020 TOMM6Q96B49 74 aa2.97□□□□□ -1.93
PCDH9-206ENST00000617020 C8orf17Q9NRJ1 99 aa2.97□□□□□ -1.93
PCDH9-206ENST00000617020 FABP4P15090 132 aa2.96□□□□□ -1.94
PCDH9-206ENST00000617020 MP68P56378 58 aa2.96□□□□□ -1.94
PCDH9-206ENST00000617020 BAGE3Q86Y29 109 aa2.96□□□□□ -1.94
PCDH9-206ENST00000617020 C20orf166-AS1Q96NR2 134 aa2.96□□□□□ -1.94
PCDH9-206ENST00000617020 SCGB3A1Q96QR1 104 aa2.96□□□□□ -1.94
PCDH9-206ENST00000617020 AMELXQ99217 191 aa2.96□□□□□ -1.94
PCDH9-206ENST00000617020 TIMM21Q9BVV7 248 aa2.96□□□□□ -1.94
PCDH9-206ENST00000617020 CKS1BP61024 79 aa2.95□□□□□ -1.94
PCDH9-206ENST00000617020 MRPS36P82909 103 aaKnown RBP2.95□□□□□ -1.94
PCDH9-206ENST00000617020 SSBP3-AS1Q7Z2R9 100 aa2.95□□□□□ -1.94
PCDH9-206ENST00000617020 PCP2Q8IVA1 136 aa2.95□□□□□ -1.94
PCDH9-206ENST00000617020 CHCHD1Q96BP2 118 aaKnown RBP2.95□□□□□ -1.94
PCDH9-206ENST00000617020 CST9LQ9H4G1 147 aa2.95□□□□□ -1.94
PCDH9-206ENST00000617020 CYSLTR1Q9Y271 337 aa2.95□□□□□ -1.94
PCDH9-206ENST00000617020 TSTD3H0UI37 97 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 K7EMI3 77 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 HBDP02042 147 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 SCGB1C2P0DMR2 95 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 RAB5BP61020 215 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 JOSD1Q15040 202 aaPredicted RBP2.94□□□□□ -1.94
PCDH9-206ENST00000617020 LINC00483Q53H64 154 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 TMEM141Q96I45 108 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 SPANXA1Q9NS26 97 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 TOMM7Q9P0U1 55 aa2.94□□□□□ -1.94
PCDH9-206ENST00000617020 A6NN06 94 aa2.93□□□□□ -1.94
PCDH9-206ENST00000617020 IFI27L1Q96BM0 104 aa2.93□□□□□ -1.94
PCDH9-206ENST00000617020 PMCHL2Q9BQD1 86 aa2.93□□□□□ -1.94
PCDH9-206ENST00000617020 CDKN2A-AS1Q9UH64 79 aa2.93□□□□□ -1.94
PCDH9-206ENST00000617020 LEPROTL1O95214 131 aa2.92□□□□□ -1.94
PCDH9-206ENST00000617020 SCGB1A1P11684 91 aa2.92□□□□□ -1.94
PCDH9-206ENST00000617020 LUZP6Q538Z0 58 aa2.92□□□□□ -1.94
PCDH9-206ENST00000617020 HIST3H2BBQ8N257 126 aa2.92□□□□□ -1.94
PCDH9-206ENST00000617020 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
PCDH9-206ENST00000617020 F8VRH5 84 aa2.91□□□□□ -1.94
PCDH9-206ENST00000617020 C3orf79P0CE67 100 aa2.91□□□□□ -1.94
PCDH9-206ENST00000617020 C9orf153Q5TBE3 101 aa2.91□□□□□ -1.94
PCDH9-206ENST00000617020 Q8IZM0 81 aa2.91□□□□□ -1.94
PCDH9-206ENST00000617020 LIMD2Q9BT23 127 aa2.91□□□□□ -1.94
PCDH9-206ENST00000617020 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.95
PCDH9-206ENST00000617020 TMEM223A0PJW6 202 aa2.9□□□□□ -1.95
PCDH9-206ENST00000617020 SYS1-DBNDD2H3BUS1 97 aa2.9□□□□□ -1.95
PCDH9-206ENST00000617020 SPINK8P0C7L1 97 aa2.9□□□□□ -1.95
PCDH9-206ENST00000617020 IGLC3P0DOY3 106 aa2.9□□□□□ -1.95
PCDH9-206ENST00000617020 ZNF22P17026 224 aaPredicted RBP2.9□□□□□ -1.95
PCDH9-206ENST00000617020 SMCR5Q8TEV8 140 aa2.9□□□□□ -1.95
PCDH9-206ENST00000617020 SIGMAR1Q99720 223 aa2.9□□□□□ -1.95
PCDH9-206ENST00000617020 HIST1H2BLQ99880 126 aa2.9□□□□□ -1.95
PCDH9-206ENST00000617020 TRAV12-1A0A0B4J245 112 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 BPY2O14599 106 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 KRTDAPP60985 99 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 HRCT1Q6UXD1 115 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 SCGB1D4Q6XE38 83 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 AHNAK2Q8IVF2 5795 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 SPRR2FQ96RM1 72 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 C2orf88Q9BSF0 95 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 HSPB8Q9UJY1 196 aa2.89□□□□□ -1.95
PCDH9-206ENST00000617020 TRBV20-1A0A075B6N2 111 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 FAM236DA0A1B0GTK5 79 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 LINC01549A6NIU2 74 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 FAM236CP0DP71 79 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 SPRR2DP22532 72 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 DSCR10P59022 87 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 TSPEAR-AS2P59090 65 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 HERVK_113P63121 156 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 TMEM170BQ5T4T1 132 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 LINC01545Q5VT33 79 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 ATP11AUNQ6ZP68 121 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 ATOH7Q8N100 152 aa2.88□□□□□ -1.95
PCDH9-206ENST00000617020 IGKCP01834 107 aa2.87□□□□□ -1.95
PCDH9-206ENST00000617020 DEFB116Q30KQ4 102 aa2.87□□□□□ -1.95
PCDH9-206ENST00000617020 SMIM20Q8N5G0 67 aa2.87□□□□□ -1.95
PCDH9-206ENST00000617020 Q8NDZ9 215 aa2.87□□□□□ -1.95
PCDH9-206ENST00000617020 OR13C6PQ8NH95 151 aa2.87□□□□□ -1.95
PCDH9-206ENST00000617020 COX7B2Q8TF08 81 aa2.87□□□□□ -1.95
PCDH9-206ENST00000617020 ZNF625Q96I27 306 aaPredicted RBP2.87□□□□□ -1.95
PCDH9-206ENST00000617020 TTTY13Q9BZ97 58 aa2.87□□□□□ -1.95
PCDH9-206ENST00000617020 DPM2O94777 84 aa2.86□□□□□ -1.95
PCDH9-206ENST00000617020 SEC11AP67812 179 aa2.86□□□□□ -1.95
PCDH9-206ENST00000617020 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
PCDH9-206ENST00000617020 LEPROTO15243 131 aa2.85□□□□□ -1.95
PCDH9-206ENST00000617020 ERC2-IT1O76042 136 aa2.85□□□□□ -1.95
PCDH9-206ENST00000617020 LINC00313P59037 77 aa2.85□□□□□ -1.95
PCDH9-206ENST00000617020 ADM2Q7Z4H4 148 aa2.85□□□□□ -1.95
PCDH9-206ENST00000617020 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
PCDH9-206ENST00000617020 LINC00587B1AMM8 73 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms