RNA–Protein interactions for RNA: ENST00000616956.1

SEM1-216, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-216ENST00000616956 REV3LO60673 3130 aa0.04□□□□□ -2.4
SEM1-216ENST00000616956 ASXL1Q8IXJ9 1541 aa0.03□□□□□ -2.4
SEM1-216ENST00000616956 LRP2P98164 4655 aa0.03□□□□□ -2.4
SEM1-216ENST00000616956 THOC2Q8NI27 1593 aaKnown RBP0.03□□□□□ -2.4
SEM1-216ENST00000616956 DEFB130BP0DP73 79 aa0.03□□□□□ -2.4
SEM1-216ENST00000616956 DEFB130AP0DP74 79 aa0.03□□□□□ -2.4
SEM1-216ENST00000616956 DEFB114Q30KQ6 69 aa0.02□□□□□ -2.41
SEM1-216ENST00000616956 KNL1Q8NG31 2342 aa0.02□□□□□ -2.41
SEM1-216ENST00000616956 APC2O95996 2303 aa0.01□□□□□ -2.41
SEM1-216ENST00000616956 WNK1Q9H4A3 2382 aa0.01□□□□□ -2.41
SEM1-216ENST00000616956 HECTD4Q9Y4D8 3996 aa0.01□□□□□ -2.41
SEM1-216ENST00000616956 TJP1Q07157 1748 aa-0.01□□□□□ -2.41
SEM1-216ENST00000616956 ITSN1Q15811 1721 aa-0.01□□□□□ -2.41
SEM1-216ENST00000616956 ABCA9Q8IUA7 1624 aa-0.01□□□□□ -2.41
SEM1-216ENST00000616956 LINC01549A6NIU2 74 aa-0.01□□□□□ -2.41
SEM1-216ENST00000616956 MAP1BP46821 2468 aaKnown RBP-0.01□□□□□ -2.41
SEM1-216ENST00000616956 RNF17Q9BXT8 1623 aaKnown RBP-0.02□□□□□ -2.41
SEM1-216ENST00000616956 PCNX1Q96RV3 2341 aa-0.02□□□□□ -2.41
SEM1-216ENST00000616956 PRLHP81277 87 aa-0.02□□□□□ -2.41
SEM1-216ENST00000616956 PARP4Q9UKK3 1724 aaKnown RBP-0.02□□□□□ -2.41
SEM1-216ENST00000616956 FLNCQ14315 2725 aa-0.02□□□□□ -2.41
SEM1-216ENST00000616956 ACANP16112 2415 aa-0.03□□□□□ -2.41
SEM1-216ENST00000616956 PDE4DIPQ5VU43 2346 aa-0.03□□□□□ -2.41
SEM1-216ENST00000616956 A0A087WWC5 75 aa-0.03□□□□□ -2.41
SEM1-216ENST00000616956 NHSQ6T4R5 1651 aa-0.03□□□□□ -2.41
SEM1-216ENST00000616956 SETXQ7Z333 2677 aaKnown RBP-0.03□□□□□ -2.41
SEM1-216ENST00000616956 EFCAB5A4FU69 1503 aa-0.03□□□□□ -2.41
SEM1-216ENST00000616956 KIAA0586Q9BVV6 1533 aa-0.03□□□□□ -2.41
SEM1-216ENST00000616956 NRAPQ86VF7 1730 aa-0.04□□□□□ -2.42
SEM1-216ENST00000616956 MINOS1Q5TGZ0 78 aa-0.04□□□□□ -2.42
SEM1-216ENST00000616956 DCHS2Q6V1P9 2916 aa-0.04□□□□□ -2.42
SEM1-216ENST00000616956 ZC3H13Q5T200 1668 aaKnown RBP-0.05□□□□□ -2.42
SEM1-216ENST00000616956 DNMBPQ6XZF7 1577 aa-0.05□□□□□ -2.42
SEM1-216ENST00000616956 INO80Q9ULG1 1556 aaPredicted RBP-0.05□□□□□ -2.42
SEM1-216ENST00000616956 SMIM31A0A1B0GVY4 71 aa-0.05□□□□□ -2.42
SEM1-216ENST00000616956 SPRR2AP35326 72 aa-0.05□□□□□ -2.42
SEM1-216ENST00000616956 ABCC6O95255 1503 aa-0.05□□□□□ -2.42
SEM1-216ENST00000616956 FLNBO75369 2602 aaKnown RBP-0.05□□□□□ -2.42
SEM1-216ENST00000616956 DSTQ03001 7570 aaKnown RBP-0.05□□□□□ -2.42
SEM1-216ENST00000616956 TRANK1O15050 2925 aa-0.06□□□□□ -2.42
SEM1-216ENST00000616956 C9orf92A6NGG3 77 aa-0.06□□□□□ -2.42
SEM1-216ENST00000616956 K7EMI3 77 aa-0.06□□□□□ -2.42
SEM1-216ENST00000616956 MADDQ8WXG6 1647 aa-0.06□□□□□ -2.42
SEM1-216ENST00000616956 KRTAP6-2Q3LI66 62 aa-0.07□□□□□ -2.42
SEM1-216ENST00000616956 S4R3F8 94 aa-0.07□□□□□ -2.42
SEM1-216ENST00000616956 H3BNG1 76 aa-0.08□□□□□ -2.42
SEM1-216ENST00000616956 WT1-ASQ06250 92 aa-0.08□□□□□ -2.42
SEM1-216ENST00000616956 NCBP2-AS2Q69YL0 99 aa-0.08□□□□□ -2.42
SEM1-216ENST00000616956 DEFB106AQ8N104 65 aa-0.08□□□□□ -2.42
SEM1-216ENST00000616956 COL6A3P12111 3177 aa-0.08□□□□□ -2.42
SEM1-216ENST00000616956 NSD1Q96L73 2696 aaPredicted RBP-0.09□□□□□ -2.42
SEM1-216ENST00000616956 MROH1Q8NDA8 1641 aa-0.09□□□□□ -2.42
SEM1-216ENST00000616956 RPS27P42677 84 aaKnown RBP-0.09□□□□□ -2.42
SEM1-216ENST00000616956 RPS27LQ71UM5 84 aaKnown RBP-0.09□□□□□ -2.42
SEM1-216ENST00000616956 S100ZQ8WXG8 99 aa-0.09□□□□□ -2.42
SEM1-216ENST00000616956 FLNAP21333 2647 aaKnown RBP-0.09□□□□□ -2.42
SEM1-216ENST00000616956 C6orf48Q9UBA6 75 aa-0.1□□□□□ -2.43
SEM1-216ENST00000616956 AKAP13Q12802 2813 aa-0.1□□□□□ -2.43
SEM1-216ENST00000616956 PKHD1P08F94 4074 aa-0.11□□□□□ -2.43
SEM1-216ENST00000616956 SERF2P84101 59 aa-0.11□□□□□ -2.43
SEM1-216ENST00000616956 LYSTQ99698 3801 aa-0.11□□□□□ -2.43
SEM1-216ENST00000616956 C3P01024 1663 aa-0.11□□□□□ -2.43
SEM1-216ENST00000616956 SPRR2EP22531 72 aa-0.12□□□□□ -2.43
SEM1-216ENST00000616956 FCER1GP30273 86 aa-0.12□□□□□ -2.43
SEM1-216ENST00000616956 NMES1Q9C002 83 aa-0.12□□□□□ -2.43
SEM1-216ENST00000616956 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.12□□□□□ -2.43
SEM1-216ENST00000616956 PKD1P98161 4303 aa-0.13□□□□□ -2.43
SEM1-216ENST00000616956 SMIM5Q71RC9 77 aa-0.13□□□□□ -2.43
SEM1-216ENST00000616956 STAB1Q9NY15 2570 aa-0.14□□□□□ -2.43
SEM1-216ENST00000616956 ZANQ9Y493 2812 aa-0.14□□□□□ -2.43
SEM1-216ENST00000616956 H3BUA1 57 aa-0.14□□□□□ -2.43
SEM1-216ENST00000616956 M0R1W7 72 aa-0.14□□□□□ -2.43
SEM1-216ENST00000616956 SFTA3P0C7M3 94 aa-0.14□□□□□ -2.43
SEM1-216ENST00000616956 TNRC18O15417 2968 aaPredicted RBP-0.14□□□□□ -2.43
SEM1-216ENST00000616956 DSPP15924 2871 aaKnown RBP-0.14□□□□□ -2.43
SEM1-216ENST00000616956 HECTD1Q9ULT8 2610 aa-0.15□□□□□ -2.43
SEM1-216ENST00000616956 SVEP1Q4LDE5 3571 aa-0.15□□□□□ -2.43
SEM1-216ENST00000616956 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
SEM1-216ENST00000616956 MUC2Q02817 5179 aa-0.15□□□□□ -2.43
SEM1-216ENST00000616956 TENM2Q9NT68 2774 aa-0.15□□□□□ -2.43
SEM1-216ENST00000616956 ITSN2Q9NZM3 1697 aa-0.15□□□□□ -2.43
SEM1-216ENST00000616956 NBASA2RRP1 2371 aa-0.16□□□□□ -2.43
SEM1-216ENST00000616956 FLGP20930 4061 aaPredicted RBP-0.16□□□□□ -2.43
SEM1-216ENST00000616956 CCDC180Q9P1Z9 1646 aa-0.16□□□□□ -2.44
SEM1-216ENST00000616956 MT1AP04731 61 aa-0.17□□□□□ -2.44
SEM1-216ENST00000616956 ABCA6Q8N139 1617 aa-0.17□□□□□ -2.44
SEM1-216ENST00000616956 BPTFQ12830 3046 aa-0.17□□□□□ -2.44
SEM1-216ENST00000616956 KIF1AQ12756 1690 aa-0.18□□□□□ -2.44
SEM1-216ENST00000616956 SPTBN4Q9H254 2564 aa-0.18□□□□□ -2.44
SEM1-216ENST00000616956 SONP18583 2426 aaKnown RBP-0.18□□□□□ -2.44
SEM1-216ENST00000616956 CLASP1Q7Z460 1538 aa-0.18□□□□□ -2.44
SEM1-216ENST00000616956 DNAH9Q9NYC9 4486 aa-0.19□□□□□ -2.44
SEM1-216ENST00000616956 PRRC2CQ9Y520 2896 aaKnown RBP-0.19□□□□□ -2.44
SEM1-216ENST00000616956 CREBBPQ92793 2442 aa-0.19□□□□□ -2.44
SEM1-216ENST00000616956 FAT3Q8TDW7 4589 aa-0.19□□□□□ -2.44
SEM1-216ENST00000616956 KRTAP19-7Q3SYF9 63 aa-0.19□□□□□ -2.44
SEM1-216ENST00000616956 SETD2Q9BYW2 2564 aaPredicted RBP-0.19□□□□□ -2.44
SEM1-216ENST00000616956 IGIPA6NJ69 53 aa-0.2□□□□□ -2.44
SEM1-216ENST00000616956 TMEM167BQ9NRX6 74 aa-0.2□□□□□ -2.44
SEM1-216ENST00000616956 MUC12Q9UKN1 5478 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms