RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 A0A0C4DFX4 3053 aa6.08□□□□□ -1.44
SHTN1-207ENST00000615301 Q6ZSA8 131 aa6.07□□□□□ -1.44
SHTN1-207ENST00000615301 KRTAP1-1Q07627 177 aa6.07□□□□□ -1.44
SHTN1-207ENST00000615301 Q5W150 140 aa6.04□□□□□ -1.44
SHTN1-207ENST00000615301 NBEAL1Q6ZS30 2694 aa6.03□□□□□ -1.44
SHTN1-207ENST00000615301 ZCCHC13Q8WW36 166 aaKnown RBP6.02□□□□□ -1.45
SHTN1-207ENST00000615301 NOTCH1P46531 2555 aa6.01□□□□□ -1.45
SHTN1-207ENST00000615301 LINC00472Q9H8W2 130 aa6.01□□□□□ -1.45
SHTN1-207ENST00000615301 LAMA2P24043 3122 aaKnown RBP6.01□□□□□ -1.45
SHTN1-207ENST00000615301 SPRR1AP35321 89 aa6□□□□□ -1.45
SHTN1-207ENST00000615301 LINC00483Q53H64 154 aa5.99□□□□□ -1.45
SHTN1-207ENST00000615301 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
SHTN1-207ENST00000615301 CFAP46Q8IYW2 2715 aa5.98□□□□□ -1.45
SHTN1-207ENST00000615301 M0R2T5 61 aa5.97□□□□□ -1.45
SHTN1-207ENST00000615301 HELZ2Q9BYK8 2649 aaKnown RBP5.97□□□□□ -1.45
SHTN1-207ENST00000615301 S4R3F8 94 aa5.97□□□□□ -1.45
SHTN1-207ENST00000615301 UNC79Q9P2D8 2635 aa5.96□□□□□ -1.45
SHTN1-207ENST00000615301 CHD7Q9P2D1 2997 aa5.96□□□□□ -1.46
SHTN1-207ENST00000615301 GCN1Q92616 2671 aaKnown RBP5.95□□□□□ -1.46
SHTN1-207ENST00000615301 FREM2Q5SZK8 3169 aa5.95□□□□□ -1.46
SHTN1-207ENST00000615301 TEX15Q9BXT5 2789 aa5.95□□□□□ -1.46
SHTN1-207ENST00000615301 TEP1Q99973 2627 aaKnown RBP5.95□□□□□ -1.46
SHTN1-207ENST00000615301 STAB2Q8WWQ8 2551 aa5.95□□□□□ -1.46
SHTN1-207ENST00000615301 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
SHTN1-207ENST00000615301 PLAC8Q9NZF1 115 aa5.93□□□□□ -1.46
SHTN1-207ENST00000615301 DMBT1Q9UGM3 2413 aaPredicted RBP5.93□□□□□ -1.46
SHTN1-207ENST00000615301 A0A0A0MQY5 61 aa5.92□□□□□ -1.46
SHTN1-207ENST00000615301 KRTAP26-1Q6PEX3 210 aa5.92□□□□□ -1.46
SHTN1-207ENST00000615301 R4GN34 69 aa5.92□□□□□ -1.46
SHTN1-207ENST00000615301 MAP1AP78559 2803 aaPredicted RBP5.91□□□□□ -1.46
SHTN1-207ENST00000615301 SETXQ7Z333 2677 aaKnown RBP5.91□□□□□ -1.46
SHTN1-207ENST00000615301 SPATA8Q6RVD6 105 aa5.91□□□□□ -1.46
SHTN1-207ENST00000615301 SPRR1BP22528 89 aa5.9□□□□□ -1.46
SHTN1-207ENST00000615301 MGAQ8IWI9 3026 aa5.9□□□□□ -1.46
SHTN1-207ENST00000615301 NBEAL2Q6ZNJ1 2754 aa5.89□□□□□ -1.47
SHTN1-207ENST00000615301 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
SHTN1-207ENST00000615301 COL6A5A8TX70 2615 aa5.88□□□□□ -1.47
SHTN1-207ENST00000615301 RANBP2P49792 3224 aaKnown RBP5.88□□□□□ -1.47
SHTN1-207ENST00000615301 ROMO1P60602 79 aa5.88□□□□□ -1.47
SHTN1-207ENST00000615301 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
SHTN1-207ENST00000615301 WDFY4Q6ZS81 3184 aa5.84□□□□□ -1.47
SHTN1-207ENST00000615301 PANO1I0J062 215 aa5.84□□□□□ -1.48
SHTN1-207ENST00000615301 M0QZ58 72 aa5.83□□□□□ -1.48
SHTN1-207ENST00000615301 A0A087X002 238 aa5.82□□□□□ -1.48
SHTN1-207ENST00000615301 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
SHTN1-207ENST00000615301 BAHCC1Q9P281 2608 aa5.82□□□□□ -1.48
SHTN1-207ENST00000615301 LAMA3Q16787 3333 aa5.82□□□□□ -1.48
SHTN1-207ENST00000615301 HTTP42858 3142 aa5.81□□□□□ -1.48
SHTN1-207ENST00000615301 KRTAP29-1A8MX34 341 aaPredicted RBP5.8□□□□□ -1.48
SHTN1-207ENST00000615301 KRTAP10-2P60368 255 aa5.8□□□□□ -1.48
SHTN1-207ENST00000615301 KRTAP10-1P60331 282 aa5.8□□□□□ -1.48
SHTN1-207ENST00000615301 MKI67P46013 3256 aaKnown RBP5.79□□□□□ -1.48
SHTN1-207ENST00000615301 BRCA2P51587 3418 aa5.79□□□□□ -1.48
SHTN1-207ENST00000615301 Q6ZR54 194 aa5.79□□□□□ -1.48
SHTN1-207ENST00000615301 ADM2Q7Z4H4 148 aa5.78□□□□□ -1.48
SHTN1-207ENST00000615301 TRIOO75962 3097 aa5.78□□□□□ -1.48
SHTN1-207ENST00000615301 A8MU10 97 aa5.77□□□□□ -1.49
SHTN1-207ENST00000615301 KRTAP4-16G5E9R7 235 aaPredicted RBP5.77□□□□□ -1.49
SHTN1-207ENST00000615301 CHD9Q3L8U1 2897 aa5.76□□□□□ -1.49
SHTN1-207ENST00000615301 NSD1Q96L73 2696 aaPredicted RBP5.76□□□□□ -1.49
SHTN1-207ENST00000615301 UBR5O95071 2799 aaPredicted RBP5.76□□□□□ -1.49
SHTN1-207ENST00000615301 XIRP2A4UGR9 3374 aa5.75□□□□□ -1.49
SHTN1-207ENST00000615301 FRYQ5TBA9 3013 aa5.74□□□□□ -1.49
SHTN1-207ENST00000615301 Q5VSD8 79 aa5.73□□□□□ -1.49
SHTN1-207ENST00000615301 A6NN06 94 aa5.72□□□□□ -1.49
SHTN1-207ENST00000615301 UNC80Q8N2C7 3258 aa5.71□□□□□ -1.49
SHTN1-207ENST00000615301 KRTAP11-1Q8IUC1 163 aa5.71□□□□□ -1.5
SHTN1-207ENST00000615301 ZNF292O60281 2723 aa5.71□□□□□ -1.5
SHTN1-207ENST00000615301 PRUNE2Q8WUY3 3088 aa5.7□□□□□ -1.5
SHTN1-207ENST00000615301 SEC61BP60468 96 aaKnown RBP5.69□□□□□ -1.5
SHTN1-207ENST00000615301 KRTAP16-1A8MUX0 517 aa5.68□□□□□ -1.5
SHTN1-207ENST00000615301 DSPP15924 2871 aaKnown RBP5.68□□□□□ -1.5
SHTN1-207ENST00000615301 KRTAP25-1Q3LHN0 102 aa5.67□□□□□ -1.5
SHTN1-207ENST00000615301 VPS13AQ96RL7 3174 aa5.67□□□□□ -1.5
SHTN1-207ENST00000615301 DMXL2Q8TDJ6 3036 aa5.67□□□□□ -1.5
SHTN1-207ENST00000615301 TRANK1O15050 2925 aa5.67□□□□□ -1.5
SHTN1-207ENST00000615301 ASH1LQ9NR48 2969 aaKnown RBP5.66□□□□□ -1.5
SHTN1-207ENST00000615301 NDUFAF8A1L188 74 aa5.65□□□□□ -1.5
SHTN1-207ENST00000615301 CELSR3Q9NYQ7 3312 aa5.65□□□□□ -1.51
SHTN1-207ENST00000615301 ASB16-AS1Q495Z4 193 aa5.64□□□□□ -1.51
SHTN1-207ENST00000615301 TACC2O95359 2948 aa5.63□□□□□ -1.51
SHTN1-207ENST00000615301 KALRNO60229 2985 aa5.63□□□□□ -1.51
SHTN1-207ENST00000615301 KRTAP7-1Q8IUC3 87 aa5.62□□□□□ -1.51
SHTN1-207ENST00000615301 KMT2BQ9UMN6 2715 aaPredicted RBP5.61□□□□□ -1.51
SHTN1-207ENST00000615301 REV3LO60673 3130 aa5.61□□□□□ -1.51
SHTN1-207ENST00000615301 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
SHTN1-207ENST00000615301 C20orf166-AS1Q96NR2 134 aa5.58□□□□□ -1.52
SHTN1-207ENST00000615301 LCE6AA0A183 80 aa5.57□□□□□ -1.52
SHTN1-207ENST00000615301 NBEAQ8NFP9 2946 aa5.57□□□□□ -1.52
SHTN1-207ENST00000615301 ITPR1Q14643 2758 aa5.56□□□□□ -1.52
SHTN1-207ENST00000615301 A8MUU9 505 aa5.55□□□□□ -1.52
SHTN1-207ENST00000615301 HIVEP1P15822 2718 aa5.54□□□□□ -1.52
SHTN1-207ENST00000615301 IGSF10Q6WRI0 2623 aa5.54□□□□□ -1.52
SHTN1-207ENST00000615301 KRTAP13-2Q52LG2 175 aa5.53□□□□□ -1.52
SHTN1-207ENST00000615301 ATMQ13315 3056 aa5.49□□□□□ -1.53
SHTN1-207ENST00000615301 APCP25054 2843 aa5.49□□□□□ -1.53
SHTN1-207ENST00000615301 UTP20O75691 2785 aaKnown RBP5.49□□□□□ -1.53
SHTN1-207ENST00000615301 Q6ZRN7 208 aaPredicted RBP5.48□□□□□ -1.53
SHTN1-207ENST00000615301 LAMA1P25391 3075 aa5.48□□□□□ -1.53
SHTN1-207ENST00000615301 CDH23Q9H251 3354 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms