RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 A0A0D9SG42 100 aa9.04□□□□□ -0.96
SNPH-203ENST00000614659 ATRQ13535 2644 aa9.03□□□□□ -0.96
SNPH-203ENST00000614659 Q5VSD8 79 aa9.03□□□□□ -0.96
SNPH-203ENST00000614659 HRES1P13985 223 aa8.99□□□□□ -0.97
SNPH-203ENST00000614659 Q5VV11 94 aa8.99□□□□□ -0.97
SNPH-203ENST00000614659 KRTAP4-16G5E9R7 235 aaPredicted RBP8.97□□□□□ -0.97
SNPH-203ENST00000614659 A0A1B0GU33 70 aa8.96□□□□□ -0.98
SNPH-203ENST00000614659 SEC61BP60468 96 aaKnown RBP8.95□□□□□ -0.98
SNPH-203ENST00000614659 MKI67P46013 3256 aaKnown RBP8.95□□□□□ -0.98
SNPH-203ENST00000614659 BAHCC1Q9P281 2608 aa8.95□□□□□ -0.98
SNPH-203ENST00000614659 Q6ZR54 194 aa8.95□□□□□ -0.98
SNPH-203ENST00000614659 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
SNPH-203ENST00000614659 OXTP01178 125 aa8.94□□□□□ -0.98
SNPH-203ENST00000614659 LUZP6Q538Z0 58 aa8.94□□□□□ -0.98
SNPH-203ENST00000614659 PRAC1Q96KF2 57 aa8.93□□□□□ -0.98
SNPH-203ENST00000614659 KRTAP1-5Q9BYS1 174 aa8.92□□□□□ -0.98
SNPH-203ENST00000614659 KRTAP10-1P60331 282 aa8.9□□□□□ -0.98
SNPH-203ENST00000614659 AKAP13Q12802 2813 aa8.9□□□□□ -0.99
SNPH-203ENST00000614659 LAMA3Q16787 3333 aa8.88□□□□□ -0.99
SNPH-203ENST00000614659 UNC79Q9P2D8 2635 aa8.88□□□□□ -0.99
SNPH-203ENST00000614659 ZCCHC13Q8WW36 166 aaKnown RBP8.87□□□□□ -0.99
SNPH-203ENST00000614659 MGAQ8IWI9 3026 aa8.87□□□□□ -0.99
SNPH-203ENST00000614659 M0R2T5 61 aa8.86□□□□□ -0.99
SNPH-203ENST00000614659 SPINK7P58062 85 aa8.86□□□□□ -0.99
SNPH-203ENST00000614659 KRTAP10-2P60368 255 aa8.85□□□□□ -0.99
SNPH-203ENST00000614659 BRCA2P51587 3418 aa8.84□□□□□ -0.99
SNPH-203ENST00000614659 Q5W150 140 aa8.83□□□□□ -1
SNPH-203ENST00000614659 CSAG1Q6PB30 78 aa8.83□□□□□ -1
SNPH-203ENST00000614659 DMAC1Q96GE9 116 aa8.82□□□□□ -1
SNPH-203ENST00000614659 IGSF10Q6WRI0 2623 aa8.82□□□□□ -1
SNPH-203ENST00000614659 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
SNPH-203ENST00000614659 A0A0C4DFX4 3053 aa8.75□□□□□ -1.01
SNPH-203ENST00000614659 A0A0A0MQY5 61 aa8.72□□□□□ -1.01
SNPH-203ENST00000614659 ASB16-AS1Q495Z4 193 aa8.72□□□□□ -1.01
SNPH-203ENST00000614659 COL6A5A8TX70 2615 aa8.7□□□□□ -1.02
SNPH-203ENST00000614659 TEP1Q99973 2627 aaKnown RBP8.69□□□□□ -1.02
SNPH-203ENST00000614659 CENPEQ02224 2701 aa8.67□□□□□ -1.02
SNPH-203ENST00000614659 CAMK2N1Q7Z7J9 78 aa8.67□□□□□ -1.02
SNPH-203ENST00000614659 CFAP54Q96N23 3096 aa8.67□□□□□ -1.02
SNPH-203ENST00000614659 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
SNPH-203ENST00000614659 STAB1Q9NY15 2570 aa8.66□□□□□ -1.02
SNPH-203ENST00000614659 S4R3F8 94 aa8.65□□□□□ -1.02
SNPH-203ENST00000614659 LAMA2P24043 3122 aaKnown RBP8.65□□□□□ -1.03
SNPH-203ENST00000614659 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
SNPH-203ENST00000614659 SETXQ7Z333 2677 aaKnown RBP8.64□□□□□ -1.03
SNPH-203ENST00000614659 PANO1I0J062 215 aa8.63□□□□□ -1.03
SNPH-203ENST00000614659 PRUNE2Q8WUY3 3088 aa8.62□□□□□ -1.03
SNPH-203ENST00000614659 TEX15Q9BXT5 2789 aa8.62□□□□□ -1.03
SNPH-203ENST00000614659 ROMO1P60602 79 aa8.62□□□□□ -1.03
SNPH-203ENST00000614659 KRTAP7-1Q8IUC3 87 aa8.61□□□□□ -1.03
SNPH-203ENST00000614659 CDH23Q9H251 3354 aa8.61□□□□□ -1.03
SNPH-203ENST00000614659 UNC80Q8N2C7 3258 aa8.61□□□□□ -1.03
SNPH-203ENST00000614659 WDFY4Q6ZS81 3184 aa8.6□□□□□ -1.03
SNPH-203ENST00000614659 DSPP15924 2871 aaKnown RBP8.59□□□□□ -1.03
SNPH-203ENST00000614659 TRIOO75962 3097 aa8.59□□□□□ -1.03
SNPH-203ENST00000614659 RPL37P61927 97 aaKnown RBP8.58□□□□□ -1.04
SNPH-203ENST00000614659 KRTAP13-1Q8IUC0 172 aa8.58□□□□□ -1.04
SNPH-203ENST00000614659 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
SNPH-203ENST00000614659 KMT2BQ9UMN6 2715 aaPredicted RBP8.56□□□□□ -1.04
SNPH-203ENST00000614659 GCN1Q92616 2671 aaKnown RBP8.56□□□□□ -1.04
SNPH-203ENST00000614659 CHD6Q8TD26 2715 aa8.55□□□□□ -1.04
SNPH-203ENST00000614659 A6NN06 94 aa8.53□□□□□ -1.04
SNPH-203ENST00000614659 KRTAP11-1Q8IUC1 163 aa8.52□□□□□ -1.05
SNPH-203ENST00000614659 KRTAP16-1A8MUX0 517 aa8.51□□□□□ -1.05
SNPH-203ENST00000614659 VPS13AQ96RL7 3174 aa8.5□□□□□ -1.05
SNPH-203ENST00000614659 SPATA8Q6RVD6 105 aa8.5□□□□□ -1.05
SNPH-203ENST00000614659 SZT2Q5T011 3432 aa8.47□□□□□ -1.05
SNPH-203ENST00000614659 A0A087X002 238 aa8.47□□□□□ -1.05
SNPH-203ENST00000614659 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
SNPH-203ENST00000614659 R4GN34 69 aa8.45□□□□□ -1.06
SNPH-203ENST00000614659 FRYQ5TBA9 3013 aa8.45□□□□□ -1.06
SNPH-203ENST00000614659 ITPR2Q14571 2701 aa8.45□□□□□ -1.06
SNPH-203ENST00000614659 LAMA1P25391 3075 aa8.44□□□□□ -1.06
SNPH-203ENST00000614659 NOTCH2NLQ7Z3S9 236 aa8.42□□□□□ -1.06
SNPH-203ENST00000614659 NSD1Q96L73 2696 aaPredicted RBP8.39□□□□□ -1.07
SNPH-203ENST00000614659 XIRP2A4UGR9 3374 aa8.39□□□□□ -1.07
SNPH-203ENST00000614659 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
SNPH-203ENST00000614659 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
SNPH-203ENST00000614659 KRTAP13-2Q52LG2 175 aa8.33□□□□□ -1.08
SNPH-203ENST00000614659 FLNCQ14315 2725 aa8.33□□□□□ -1.08
SNPH-203ENST00000614659 M0QZ58 72 aa8.32□□□□□ -1.08
SNPH-203ENST00000614659 VCANP13611 3396 aa8.28□□□□□ -1.08
SNPH-203ENST00000614659 NBEAL1Q6ZS30 2694 aa8.28□□□□□ -1.08
SNPH-203ENST00000614659 DNAH14Q0VDD8 3507 aa8.27□□□□□ -1.08
SNPH-203ENST00000614659 UTP20O75691 2785 aaKnown RBP8.27□□□□□ -1.09
SNPH-203ENST00000614659 ADM2Q7Z4H4 148 aa8.27□□□□□ -1.09
SNPH-203ENST00000614659 PLAC4Q8WY50 150 aa8.26□□□□□ -1.09
SNPH-203ENST00000614659 NBEAL2Q6ZNJ1 2754 aa8.26□□□□□ -1.09
SNPH-203ENST00000614659 HIVEP1P15822 2718 aa8.26□□□□□ -1.09
SNPH-203ENST00000614659 ITPR1Q14643 2758 aa8.26□□□□□ -1.09
SNPH-203ENST00000614659 MAP1AP78559 2803 aaPredicted RBP8.25□□□□□ -1.09
SNPH-203ENST00000614659 SPTBN5Q9NRC6 3674 aaKnown RBP8.25□□□□□ -1.09
SNPH-203ENST00000614659 LRBAP50851 2863 aa8.24□□□□□ -1.09
SNPH-203ENST00000614659 ATMQ13315 3056 aa8.24□□□□□ -1.09
SNPH-203ENST00000614659 UBR5O95071 2799 aaPredicted RBP8.24□□□□□ -1.09
SNPH-203ENST00000614659 ADGRG4Q8IZF6 3080 aa8.21□□□□□ -1.09
SNPH-203ENST00000614659 A8MU10 97 aa8.2□□□□□ -1.1
SNPH-203ENST00000614659 DMXL2Q8TDJ6 3036 aa8.19□□□□□ -1.1
SNPH-203ENST00000614659 KALRNO60229 2985 aa8.19□□□□□ -1.1
SNPH-203ENST00000614659 APCP25054 2843 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms