RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 UTRNP46939 3433 aa10.65□□□□□ -0.7
HMGXB3-206ENST00000613459 A0A0A0MQY5 61 aa10.65□□□□□ -0.71
HMGXB3-206ENST00000613459 ITPR3Q14573 2671 aa10.64□□□□□ -0.71
HMGXB3-206ENST00000613459 Q8NDZ9 215 aa10.64□□□□□ -0.71
HMGXB3-206ENST00000613459 SPINK7P58062 85 aa10.63□□□□□ -0.71
HMGXB3-206ENST00000613459 ATRQ13535 2644 aa10.59□□□□□ -0.71
HMGXB3-206ENST00000613459 C5orf42Q9H799 3197 aa10.54□□□□□ -0.72
HMGXB3-206ENST00000613459 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
HMGXB3-206ENST00000613459 HELZ2Q9BYK8 2649 aaKnown RBP10.53□□□□□ -0.72
HMGXB3-206ENST00000613459 ROMO1P60602 79 aa10.51□□□□□ -0.73
HMGXB3-206ENST00000613459 KRTAP26-1Q6PEX3 210 aa10.5□□□□□ -0.73
HMGXB3-206ENST00000613459 CHD9Q3L8U1 2897 aa10.5□□□□□ -0.73
HMGXB3-206ENST00000613459 SEC61BP60468 96 aaKnown RBP10.49□□□□□ -0.73
HMGXB3-206ENST00000613459 MAST4O15021 2626 aa10.48□□□□□ -0.73
HMGXB3-206ENST00000613459 M0R2T5 61 aa10.47□□□□□ -0.73
HMGXB3-206ENST00000613459 RPL37P61927 97 aaKnown RBP10.47□□□□□ -0.73
HMGXB3-206ENST00000613459 CFAP46Q8IYW2 2715 aa10.45□□□□□ -0.74
HMGXB3-206ENST00000613459 R4GN34 69 aa10.44□□□□□ -0.74
HMGXB3-206ENST00000613459 H1FX-AS1Q4G0G2 97 aa10.43□□□□□ -0.74
HMGXB3-206ENST00000613459 Q6ZR54 194 aa10.43□□□□□ -0.74
HMGXB3-206ENST00000613459 CENPEQ02224 2701 aa10.41□□□□□ -0.74
HMGXB3-206ENST00000613459 KRTAP1-5Q9BYS1 174 aa10.36□□□□□ -0.75
HMGXB3-206ENST00000613459 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
HMGXB3-206ENST00000613459 HTTP42858 3142 aa10.33□□□□□ -0.76
HMGXB3-206ENST00000613459 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
HMGXB3-206ENST00000613459 CFAP54Q96N23 3096 aa10.29□□□□□ -0.76
HMGXB3-206ENST00000613459 Q5VSD8 79 aa10.27□□□□□ -0.76
HMGXB3-206ENST00000613459 LCE6AA0A183 80 aa10.27□□□□□ -0.77
HMGXB3-206ENST00000613459 A6NN06 94 aa10.27□□□□□ -0.77
HMGXB3-206ENST00000613459 TRANK1O15050 2925 aa10.26□□□□□ -0.77
HMGXB3-206ENST00000613459 AKAP13Q12802 2813 aa10.26□□□□□ -0.77
HMGXB3-206ENST00000613459 KRTAP10-1P60331 282 aa10.25□□□□□ -0.77
HMGXB3-206ENST00000613459 CHD6Q8TD26 2715 aa10.25□□□□□ -0.77
HMGXB3-206ENST00000613459 RANBP2P49792 3224 aaKnown RBP10.24□□□□□ -0.77
HMGXB3-206ENST00000613459 SPATA8Q6RVD6 105 aa10.23□□□□□ -0.77
HMGXB3-206ENST00000613459 MGAQ8IWI9 3026 aa10.23□□□□□ -0.77
HMGXB3-206ENST00000613459 M0QZ58 72 aa10.23□□□□□ -0.77
HMGXB3-206ENST00000613459 ZNF292O60281 2723 aa10.22□□□□□ -0.77
HMGXB3-206ENST00000613459 RPS29P62273 56 aaKnown RBP10.21□□□□□ -0.78
HMGXB3-206ENST00000613459 STAB1Q9NY15 2570 aa10.17□□□□□ -0.78
HMGXB3-206ENST00000613459 KRTAP10-2P60368 255 aa10.16□□□□□ -0.78
HMGXB3-206ENST00000613459 A8MU10 97 aa10.15□□□□□ -0.78
HMGXB3-206ENST00000613459 TEX15Q9BXT5 2789 aa10.15□□□□□ -0.79
HMGXB3-206ENST00000613459 ADM2Q7Z4H4 148 aa10.14□□□□□ -0.79
HMGXB3-206ENST00000613459 LAMA2P24043 3122 aaKnown RBP10.14□□□□□ -0.79
HMGXB3-206ENST00000613459 PANO1I0J062 215 aa10.12□□□□□ -0.79
HMGXB3-206ENST00000613459 MKI67P46013 3256 aaKnown RBP10.1□□□□□ -0.79
HMGXB3-206ENST00000613459 PLAC4Q8WY50 150 aa10.09□□□□□ -0.79
HMGXB3-206ENST00000613459 GCN1Q92616 2671 aaKnown RBP10.09□□□□□ -0.79
HMGXB3-206ENST00000613459 KRTAP25-1Q3LHN0 102 aa10.09□□□□□ -0.79
HMGXB3-206ENST00000613459 KRTAP16-1A8MUX0 517 aa10.08□□□□□ -0.8
HMGXB3-206ENST00000613459 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
HMGXB3-206ENST00000613459 TEP1Q99973 2627 aaKnown RBP10.07□□□□□ -0.8
HMGXB3-206ENST00000613459 UNC79Q9P2D8 2635 aa10.05□□□□□ -0.8
HMGXB3-206ENST00000613459 LAMA3Q16787 3333 aa10.04□□□□□ -0.8
HMGXB3-206ENST00000613459 A0A087X002 238 aa10.01□□□□□ -0.81
HMGXB3-206ENST00000613459 COL6A5A8TX70 2615 aa10.01□□□□□ -0.81
HMGXB3-206ENST00000613459 WDFY4Q6ZS81 3184 aa9.98□□□□□ -0.81
HMGXB3-206ENST00000613459 NOTCH1P46531 2555 aa9.95□□□□□ -0.82
HMGXB3-206ENST00000613459 NOTCH2NLQ7Z3S9 236 aa9.95□□□□□ -0.82
HMGXB3-206ENST00000613459 TRIOO75962 3097 aa9.92□□□□□ -0.82
HMGXB3-206ENST00000613459 DSPP15924 2871 aaKnown RBP9.91□□□□□ -0.82
HMGXB3-206ENST00000613459 Q6ZRN7 208 aaPredicted RBP9.91□□□□□ -0.82
HMGXB3-206ENST00000613459 NBEAL2Q6ZNJ1 2754 aa9.9□□□□□ -0.82
HMGXB3-206ENST00000613459 IGSF10Q6WRI0 2623 aa9.9□□□□□ -0.82
HMGXB3-206ENST00000613459 SETXQ7Z333 2677 aaKnown RBP9.89□□□□□ -0.83
HMGXB3-206ENST00000613459 BRCA2P51587 3418 aa9.86□□□□□ -0.83
HMGXB3-206ENST00000613459 KRTAP13-1Q8IUC0 172 aa9.86□□□□□ -0.83
HMGXB3-206ENST00000613459 MAP1AP78559 2803 aaPredicted RBP9.86□□□□□ -0.83
HMGXB3-206ENST00000613459 UNC80Q8N2C7 3258 aa9.83□□□□□ -0.84
HMGXB3-206ENST00000613459 KRTAP11-1Q8IUC1 163 aa9.82□□□□□ -0.84
HMGXB3-206ENST00000613459 UBR5O95071 2799 aaPredicted RBP9.81□□□□□ -0.84
HMGXB3-206ENST00000613459 A8MUU9 505 aa9.81□□□□□ -0.84
HMGXB3-206ENST00000613459 PRUNE2Q8WUY3 3088 aa9.81□□□□□ -0.84
HMGXB3-206ENST00000613459 KRTAP7-1Q8IUC3 87 aa9.8□□□□□ -0.84
HMGXB3-206ENST00000613459 FREM2Q5SZK8 3169 aa9.8□□□□□ -0.84
HMGXB3-206ENST00000613459 NBEAQ8NFP9 2946 aa9.79□□□□□ -0.84
HMGXB3-206ENST00000613459 FRYQ5TBA9 3013 aa9.79□□□□□ -0.84
HMGXB3-206ENST00000613459 DNAH14Q0VDD8 3507 aa9.79□□□□□ -0.84
HMGXB3-206ENST00000613459 C20orf166-AS1Q96NR2 134 aa9.78□□□□□ -0.84
HMGXB3-206ENST00000613459 FLG2Q5D862 2391 aaPredicted RBP9.77□□□□□ -0.85
HMGXB3-206ENST00000613459 KRTAP13-2Q52LG2 175 aa9.75□□□□□ -0.85
HMGXB3-206ENST00000613459 VPS13AQ96RL7 3174 aa9.75□□□□□ -0.85
HMGXB3-206ENST00000613459 NDUFAF8A1L188 74 aa9.73□□□□□ -0.85
HMGXB3-206ENST00000613459 DMBT1Q9UGM3 2413 aaPredicted RBP9.71□□□□□ -0.85
HMGXB3-206ENST00000613459 XIRP2A4UGR9 3374 aa9.7□□□□□ -0.86
HMGXB3-206ENST00000613459 NSD1Q96L73 2696 aaPredicted RBP9.68□□□□□ -0.86
HMGXB3-206ENST00000613459 CELSR3Q9NYQ7 3312 aa9.67□□□□□ -0.86
HMGXB3-206ENST00000613459 STAB2Q8WWQ8 2551 aa9.66□□□□□ -0.86
HMGXB3-206ENST00000613459 ITPR2Q14571 2701 aa9.65□□□□□ -0.86
HMGXB3-206ENST00000613459 ITPR1Q14643 2758 aa9.64□□□□□ -0.87
HMGXB3-206ENST00000613459 KALRNO60229 2985 aa9.62□□□□□ -0.87
HMGXB3-206ENST00000613459 BAHCC1Q9P281 2608 aa9.61□□□□□ -0.87
HMGXB3-206ENST00000613459 CDH23Q9H251 3354 aa9.6□□□□□ -0.87
HMGXB3-206ENST00000613459 TNP1P09430 55 aa9.6□□□□□ -0.87
HMGXB3-206ENST00000613459 VCANP13611 3396 aa9.59□□□□□ -0.87
HMGXB3-206ENST00000613459 KRTAP21-3Q3LHN1 58 aa9.53□□□□□ -0.88
HMGXB3-206ENST00000613459 FLNCQ14315 2725 aa9.53□□□□□ -0.88
HMGXB3-206ENST00000613459 LAMA1P25391 3075 aa9.53□□□□□ -0.88
HMGXB3-206ENST00000613459 PP632Q6XCG6 107 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms