RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 CYSTM1Q9H1C7 97 aa7.01□□□□□ -1.29
CDC42EP3-206ENST00000611976 CASC10Q5T4H9 136 aa7□□□□□ -1.29
CDC42EP3-206ENST00000611976 SMG1Q96Q15 3661 aaKnown RBP7□□□□□ -1.29
CDC42EP3-206ENST00000611976 C9orf163Q8N9P6 203 aa7□□□□□ -1.29
CDC42EP3-206ENST00000611976 K7EIL1 84 aa6.99□□□□□ -1.29
CDC42EP3-206ENST00000611976 ITPR1Q14643 2758 aa6.99□□□□□ -1.29
CDC42EP3-206ENST00000611976 SPACA4Q8TDM5 124 aa6.99□□□□□ -1.29
CDC42EP3-206ENST00000611976 CR1P17927 2039 aa6.99□□□□□ -1.29
CDC42EP3-206ENST00000611976 DSCR10P59022 87 aa6.98□□□□□ -1.29
CDC42EP3-206ENST00000611976 Q5XG85 94 aa6.98□□□□□ -1.29
CDC42EP3-206ENST00000611976 CRYBG3Q68DQ2 2970 aa6.97□□□□□ -1.29
CDC42EP3-206ENST00000611976 Q1T7F1 81 aa6.97□□□□□ -1.29
CDC42EP3-206ENST00000611976 TEP1Q99973 2627 aaKnown RBP6.96□□□□□ -1.3
CDC42EP3-206ENST00000611976 ATP11AUNQ6ZP68 121 aa6.95□□□□□ -1.3
CDC42EP3-206ENST00000611976 ZNF861PO60384 105 aa6.95□□□□□ -1.3
CDC42EP3-206ENST00000611976 TEX15Q9BXT5 2789 aa6.93□□□□□ -1.3
CDC42EP3-206ENST00000611976 SPRR1AP35321 89 aa6.93□□□□□ -1.3
CDC42EP3-206ENST00000611976 SSBP3-AS1Q7Z2R9 100 aa6.93□□□□□ -1.3
CDC42EP3-206ENST00000611976 ATRQ13535 2644 aa6.92□□□□□ -1.3
CDC42EP3-206ENST00000611976 UNC79Q9P2D8 2635 aa6.91□□□□□ -1.3
CDC42EP3-206ENST00000611976 HRNRQ86YZ3 2850 aaPredicted RBP6.9□□□□□ -1.3
CDC42EP3-206ENST00000611976 A0A087WTM6 91 aa6.9□□□□□ -1.31
CDC42EP3-206ENST00000611976 TYMSOSQ8TAI1 123 aa6.9□□□□□ -1.31
CDC42EP3-206ENST00000611976 ASH1LQ9NR48 2969 aaKnown RBP6.9□□□□□ -1.31
CDC42EP3-206ENST00000611976 APLNQ9ULZ1 77 aa6.9□□□□□ -1.31
CDC42EP3-206ENST00000611976 DCHS2Q6V1P9 2916 aa6.89□□□□□ -1.31
CDC42EP3-206ENST00000611976 FP248Q71RG6 208 aaPredicted RBP6.89□□□□□ -1.31
CDC42EP3-206ENST00000611976 CD164Q04900 197 aa6.89□□□□□ -1.31
CDC42EP3-206ENST00000611976 UQCR11O14957 56 aa6.88□□□□□ -1.31
CDC42EP3-206ENST00000611976 KTN1-AS1Q86SY8 53 aa6.88□□□□□ -1.31
CDC42EP3-206ENST00000611976 GCN1Q92616 2671 aaKnown RBP6.87□□□□□ -1.31
CDC42EP3-206ENST00000611976 Q96NJ1 140 aa6.87□□□□□ -1.31
CDC42EP3-206ENST00000611976 ZANQ9Y493 2812 aa6.87□□□□□ -1.31
CDC42EP3-206ENST00000611976 SPENQ96T58 3664 aaKnown RBP6.87□□□□□ -1.31
CDC42EP3-206ENST00000611976 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
CDC42EP3-206ENST00000611976 OXTP01178 125 aa6.86□□□□□ -1.31
CDC42EP3-206ENST00000611976 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
CDC42EP3-206ENST00000611976 FAM229BQ4G0N7 80 aa6.86□□□□□ -1.31
CDC42EP3-206ENST00000611976 KRTAP26-1Q6PEX3 210 aa6.86□□□□□ -1.31
CDC42EP3-206ENST00000611976 ITPR2Q14571 2701 aa6.85□□□□□ -1.31
CDC42EP3-206ENST00000611976 CELSR2Q9HCU4 2923 aa6.85□□□□□ -1.31
CDC42EP3-206ENST00000611976 MAST4O15021 2626 aa6.85□□□□□ -1.31
CDC42EP3-206ENST00000611976 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
CDC42EP3-206ENST00000611976 IGLV8-61A0A075B6I0 122 aa6.84□□□□□ -1.31
CDC42EP3-206ENST00000611976 IGLV7-43P04211 117 aa6.84□□□□□ -1.31
CDC42EP3-206ENST00000611976 ANAPC11Q9NYG5 84 aa6.82□□□□□ -1.32
CDC42EP3-206ENST00000611976 SVEP1Q4LDE5 3571 aa6.82□□□□□ -1.32
CDC42EP3-206ENST00000611976 MIR22HGQ0VDD5 57 aa6.82□□□□□ -1.32
CDC42EP3-206ENST00000611976 PLA2G1BP04054 148 aaKnown RBP6.81□□□□□ -1.32
CDC42EP3-206ENST00000611976 SPRR1BP22528 89 aa6.81□□□□□ -1.32
CDC42EP3-206ENST00000611976 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
CDC42EP3-206ENST00000611976 Q75L30 129 aa6.8□□□□□ -1.32
CDC42EP3-206ENST00000611976 TNP2Q05952 138 aa6.79□□□□□ -1.32
CDC42EP3-206ENST00000611976 MGAM2Q2M2H8 2515 aa6.79□□□□□ -1.32
CDC42EP3-206ENST00000611976 CSMD1Q96PZ7 3565 aa6.79□□□□□ -1.32
CDC42EP3-206ENST00000611976 BSNQ9UPA5 3926 aa6.78□□□□□ -1.32
CDC42EP3-206ENST00000611976 APCP25054 2843 aa6.78□□□□□ -1.32
CDC42EP3-206ENST00000611976 Q8N9P0 234 aaPredicted RBP6.77□□□□□ -1.33
CDC42EP3-206ENST00000611976 LINC00472Q9H8W2 130 aa6.77□□□□□ -1.33
CDC42EP3-206ENST00000611976 LCA10Q71F78 164 aa6.76□□□□□ -1.33
CDC42EP3-206ENST00000611976 SETXQ7Z333 2677 aaKnown RBP6.76□□□□□ -1.33
CDC42EP3-206ENST00000611976 WWC2-AS2Q96NR7 200 aa6.75□□□□□ -1.33
CDC42EP3-206ENST00000611976 KRTAP4-16G5E9R7 235 aaPredicted RBP6.74□□□□□ -1.33
CDC42EP3-206ENST00000611976 LINC00304Q8N9R0 145 aa6.74□□□□□ -1.33
CDC42EP3-206ENST00000611976 LINC01558Q9Y6Z2 57 aa6.74□□□□□ -1.33
CDC42EP3-206ENST00000611976 BAHCC1Q9P281 2608 aa6.74□□□□□ -1.33
CDC42EP3-206ENST00000611976 UBR5O95071 2799 aaPredicted RBP6.73□□□□□ -1.33
CDC42EP3-206ENST00000611976 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.73□□□□□ -1.33
CDC42EP3-206ENST00000611976 PRR26Q8N8Z3 221 aa6.72□□□□□ -1.33
CDC42EP3-206ENST00000611976 Q5VV11 94 aa6.71□□□□□ -1.34
CDC42EP3-206ENST00000611976 COL6A5A8TX70 2615 aa6.7□□□□□ -1.34
CDC42EP3-206ENST00000611976 CELSR1Q9NYQ6 3014 aa6.69□□□□□ -1.34
CDC42EP3-206ENST00000611976 HRES1P13985 223 aa6.68□□□□□ -1.34
CDC42EP3-206ENST00000611976 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
CDC42EP3-206ENST00000611976 NF1P21359 2839 aa6.67□□□□□ -1.34
CDC42EP3-206ENST00000611976 NBEAL2Q6ZNJ1 2754 aa6.67□□□□□ -1.34
CDC42EP3-206ENST00000611976 ZCCHC13Q8WW36 166 aaKnown RBP6.66□□□□□ -1.34
CDC42EP3-206ENST00000611976 FBN2P35556 2912 aa6.66□□□□□ -1.34
CDC42EP3-206ENST00000611976 STAB1Q9NY15 2570 aa6.66□□□□□ -1.34
CDC42EP3-206ENST00000611976 CSMD2Q7Z408 3487 aa6.66□□□□□ -1.34
CDC42EP3-206ENST00000611976 KRTAP1-5Q9BYS1 174 aa6.65□□□□□ -1.34
CDC42EP3-206ENST00000611976 NOTCH1P46531 2555 aa6.65□□□□□ -1.35
CDC42EP3-206ENST00000611976 KRTAP29-1A8MX34 341 aaPredicted RBP6.64□□□□□ -1.35
CDC42EP3-206ENST00000611976 HIVEP1P15822 2718 aa6.64□□□□□ -1.35
CDC42EP3-206ENST00000611976 NBPF19A0A087WUL8 3843 aa6.63□□□□□ -1.35
CDC42EP3-206ENST00000611976 TENM4Q6N022 2769 aa6.63□□□□□ -1.35
CDC42EP3-206ENST00000611976 C9orf92A6NGG3 77 aa6.63□□□□□ -1.35
CDC42EP3-206ENST00000611976 Q8N1X5 172 aa6.62□□□□□ -1.35
CDC42EP3-206ENST00000611976 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
CDC42EP3-206ENST00000611976 LCE6AA0A183 80 aa6.61□□□□□ -1.35
CDC42EP3-206ENST00000611976 LINC00483Q53H64 154 aa6.6□□□□□ -1.35
CDC42EP3-206ENST00000611976 MXRA5Q9NR99 2828 aa6.59□□□□□ -1.35
CDC42EP3-206ENST00000611976 Q6ZR54 194 aa6.59□□□□□ -1.35
CDC42EP3-206ENST00000611976 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.36
CDC42EP3-206ENST00000611976 Q5W150 140 aa6.58□□□□□ -1.36
CDC42EP3-206ENST00000611976 CUBNO60494 3623 aa6.57□□□□□ -1.36
CDC42EP3-206ENST00000611976 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
CDC42EP3-206ENST00000611976 SPINK7P58062 85 aa6.56□□□□□ -1.36
CDC42EP3-206ENST00000611976 NSD1Q96L73 2696 aaPredicted RBP6.54□□□□□ -1.36
CDC42EP3-206ENST00000611976 SMR3BP02814 79 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms