RNA–Protein interactions for RNA: ENST00000610489.1

SYNE1-240, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 1,754 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-240ENST00000610489 PRR26Q8N8Z3 221 aa6.15□□□□□ -1.43
SYNE1-240ENST00000610489 A0A087X002 238 aa6.14□□□□□ -1.43
SYNE1-240ENST00000610489 SCGB1C2P0DMR2 95 aa6.14□□□□□ -1.43
SYNE1-240ENST00000610489 LINC00483Q53H64 154 aa6.14□□□□□ -1.43
SYNE1-240ENST00000610489 GAGE2AQ6NT46 116 aa6.14□□□□□ -1.43
SYNE1-240ENST00000610489 hADV29S1A0JD25 119 aa6.13□□□□□ -1.43
SYNE1-240ENST00000610489 TCL1BO95988 128 aa6.13□□□□□ -1.43
SYNE1-240ENST00000610489 COX6CP09669 75 aa6.13□□□□□ -1.43
SYNE1-240ENST00000610489 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
SYNE1-240ENST00000610489 CRYGAP11844 174 aa6.13□□□□□ -1.43
SYNE1-240ENST00000610489 F8W1H4 67 aa6.13□□□□□ -1.43
SYNE1-240ENST00000610489 H3BMG7 143 aa6.13□□□□□ -1.43
SYNE1-240ENST00000610489 FAM218AQ96MZ4 157 aa6.13□□□□□ -1.43
SYNE1-240ENST00000610489 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
SYNE1-240ENST00000610489 PRO0461Q9UI25 63 aa6.12□□□□□ -1.43
SYNE1-240ENST00000610489 IGLV5-48A0A075B6I7 105 aa6.11□□□□□ -1.43
SYNE1-240ENST00000610489 SPRR1BP22528 89 aa6.11□□□□□ -1.43
SYNE1-240ENST00000610489 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
SYNE1-240ENST00000610489 Q6ZQY7 126 aa6.11□□□□□ -1.43
SYNE1-240ENST00000610489 LINC01547P58512 204 aaPredicted RBP6.11□□□□□ -1.43
SYNE1-240ENST00000610489 ATXN8Q156A1 80 aa6.11□□□□□ -1.43
SYNE1-240ENST00000610489 CLEC2BQ92478 149 aa6.11□□□□□ -1.43
SYNE1-240ENST00000610489 A0A1B0GX51 115 aa6.1□□□□□ -1.43
SYNE1-240ENST00000610489 SNCGO76070 127 aa6.1□□□□□ -1.43
SYNE1-240ENST00000610489 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.1□□□□□ -1.43
SYNE1-240ENST00000610489 DEFB105AQ8NG35 78 aa6.1□□□□□ -1.43
SYNE1-240ENST00000610489 TEX49A0A1B0GTD5 131 aa6.09□□□□□ -1.43
SYNE1-240ENST00000610489 C3orf22Q8N5N4 141 aa6.09□□□□□ -1.43
SYNE1-240ENST00000610489 LST1O00453 97 aa6.08□□□□□ -1.44
SYNE1-240ENST00000610489 TYMSOSQ8TAI1 123 aa6.08□□□□□ -1.44
SYNE1-240ENST00000610489 Q8N377 158 aa6.08□□□□□ -1.44
SYNE1-240ENST00000610489 IGLV9-49A0A0B4J1Y8 123 aa6.07□□□□□ -1.44
SYNE1-240ENST00000610489 SMIM29Q86T20 159 aa6.06□□□□□ -1.44
SYNE1-240ENST00000610489 LAMTOR3Q9UHA4 124 aa6.06□□□□□ -1.44
SYNE1-240ENST00000610489 DNAL4O96015 105 aa6.06□□□□□ -1.44
SYNE1-240ENST00000610489 MOBPQ13875 183 aa6.06□□□□□ -1.44
SYNE1-240ENST00000610489 OCIAD2Q56VL3 154 aa6.06□□□□□ -1.44
SYNE1-240ENST00000610489 PPDPFLQ8WWR9 84 aa6.06□□□□□ -1.44
SYNE1-240ENST00000610489 C9JAW5 83 aa6.05□□□□□ -1.44
SYNE1-240ENST00000610489 TRACP01848 142 aa6.05□□□□□ -1.44
SYNE1-240ENST00000610489 HERC1Q15751 4861 aa6.05□□□□□ -1.44
SYNE1-240ENST00000610489 C9orf153Q5TBE3 101 aa6.04□□□□□ -1.44
SYNE1-240ENST00000610489 Q8NBF4 154 aa6.04□□□□□ -1.44
SYNE1-240ENST00000610489 MTURNQ8N3F0 131 aa6.03□□□□□ -1.44
SYNE1-240ENST00000610489 H3BT86 120 aa6.03□□□□□ -1.44
SYNE1-240ENST00000610489 SSBP3-AS1Q7Z2R9 100 aa6.03□□□□□ -1.44
SYNE1-240ENST00000610489 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
SYNE1-240ENST00000610489 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
SYNE1-240ENST00000610489 ORMDL1Q9P0S3 153 aa6.03□□□□□ -1.44
SYNE1-240ENST00000610489 ETDBQ3ZM63 59 aa6.02□□□□□ -1.45
SYNE1-240ENST00000610489 F8WEM9 126 aa6.01□□□□□ -1.45
SYNE1-240ENST00000610489 K7ERU9 68 aa6.01□□□□□ -1.45
SYNE1-240ENST00000610489 TEN1Q86WV5 123 aa6.01□□□□□ -1.45
SYNE1-240ENST00000610489 H3BQ85 93 aa6□□□□□ -1.45
SYNE1-240ENST00000610489 KRTAP3-1Q9BYR8 98 aa5.99□□□□□ -1.45
SYNE1-240ENST00000610489 IGLV8-61A0A075B6I0 122 aa5.98□□□□□ -1.45
SYNE1-240ENST00000610489 TMEM256-PLSCR3K7ERE1 68 aa5.98□□□□□ -1.45
SYNE1-240ENST00000610489 NDUFV3P56181 108 aaKnown RBP5.98□□□□□ -1.45
SYNE1-240ENST00000610489 SPAG11AQ6PDA7 123 aa5.98□□□□□ -1.45
SYNE1-240ENST00000610489 J3QR89 54 aa5.98□□□□□ -1.45
SYNE1-240ENST00000610489 BAALC-AS2P0C853 105 aa5.97□□□□□ -1.45
SYNE1-240ENST00000610489 Q6JHZ5 121 aa5.96□□□□□ -1.46
SYNE1-240ENST00000610489 A0A0G2JQZ4 141 aa5.95□□□□□ -1.46
SYNE1-240ENST00000610489 SPINK1P00995 79 aa5.95□□□□□ -1.46
SYNE1-240ENST00000610489 IGFL1Q6UW32 110 aa5.95□□□□□ -1.46
SYNE1-240ENST00000610489 CD164Q04900 197 aa5.94□□□□□ -1.46
SYNE1-240ENST00000610489 RPS29P62273 56 aaKnown RBP5.93□□□□□ -1.46
SYNE1-240ENST00000610489 HRCT1Q6UXD1 115 aa5.93□□□□□ -1.46
SYNE1-240ENST00000610489 A0A1B0GV72 72 aa5.92□□□□□ -1.46
SYNE1-240ENST00000610489 OBSCN-AS1Q96MR7 158 aa5.9□□□□□ -1.46
SYNE1-240ENST00000610489 LIMD2Q9BT23 127 aa5.9□□□□□ -1.47
SYNE1-240ENST00000610489 HMCN2Q8NDA2 5059 aa5.89□□□□□ -1.47
SYNE1-240ENST00000610489 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
SYNE1-240ENST00000610489 RETNLBQ9BQ08 111 aa5.89□□□□□ -1.47
SYNE1-240ENST00000610489 TRBV7-7A0A0K0K1E9 115 aa5.88□□□□□ -1.47
SYNE1-240ENST00000610489 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
SYNE1-240ENST00000610489 VPS25Q9BRG1 176 aa5.88□□□□□ -1.47
SYNE1-240ENST00000610489 TRBV7-4A0A0J9YYF1 115 aa5.88□□□□□ -1.47
SYNE1-240ENST00000610489 Q5XG85 94 aa5.88□□□□□ -1.47
SYNE1-240ENST00000610489 Q6Q795 121 aa5.88□□□□□ -1.47
SYNE1-240ENST00000610489 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
SYNE1-240ENST00000610489 DSCR8Q96T75 97 aa5.87□□□□□ -1.47
SYNE1-240ENST00000610489 FAM240AA0A1B0GVK7 77 aa5.86□□□□□ -1.47
SYNE1-240ENST00000610489 A0A1W2PNM2 257 aa5.86□□□□□ -1.47
SYNE1-240ENST00000610489 PRR4Q16378 134 aa5.85□□□□□ -1.47
SYNE1-240ENST00000610489 CCKP06307 115 aa5.85□□□□□ -1.47
SYNE1-240ENST00000610489 ACYP1P07311 99 aa5.85□□□□□ -1.47
SYNE1-240ENST00000610489 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
SYNE1-240ENST00000610489 XP32Q5T750 250 aa5.83□□□□□ -1.48
SYNE1-240ENST00000610489 FP248Q71RG6 208 aaPredicted RBP5.83□□□□□ -1.48
SYNE1-240ENST00000610489 C14orf132Q9NPU4 83 aa5.83□□□□□ -1.48
SYNE1-240ENST00000610489 A0A087WSZ3 146 aa5.83□□□□□ -1.48
SYNE1-240ENST00000610489 Q6ZQT0 140 aa5.83□□□□□ -1.48
SYNE1-240ENST00000610489 PDE6GP18545 87 aa5.82□□□□□ -1.48
SYNE1-240ENST00000610489 ASB16-AS1Q495Z4 193 aa5.82□□□□□ -1.48
SYNE1-240ENST00000610489 SS18L2Q9UHA2 77 aa5.82□□□□□ -1.48
SYNE1-240ENST00000610489 IGLV7-46A0A075B6I9 117 aa5.81□□□□□ -1.48
SYNE1-240ENST00000610489 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
SYNE1-240ENST00000610489 SIGMAR1Q99720 223 aa5.8□□□□□ -1.48
SYNE1-240ENST00000610489 LPAP08519 4548 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms