RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805		Q6ZVH6	145 aa		10.89	□□□□□ -0.67
NECAB3-222	ENST00000607805	PCP2	Q8IVA1	136 aa		10.89	□□□□□ -0.67
NECAB3-222	ENST00000607805	NHP2	Q9NX24	153 aa	Known RBP	10.89	□□□□□ -0.67
NECAB3-222	ENST00000607805	SNRPE	P62304	92 aa	Known RBP	10.88	□□□□□ -0.67
NECAB3-222	ENST00000607805		Q75L30	129 aa		10.88	□□□□□ -0.67
NECAB3-222	ENST00000607805	MUSTN1	Q8IVN3	82 aa		10.88	□□□□□ -0.67
NECAB3-222	ENST00000607805	SMIM11B	Q8TCY0	68 aa		10.88	□□□□□ -0.67
NECAB3-222	ENST00000607805	HIST1H2BL	Q99880	126 aa		10.88	□□□□□ -0.67
NECAB3-222	ENST00000607805	S100A6	P06703	90 aa		10.87	□□□□□ -0.67
NECAB3-222	ENST00000607805	KRTAP9-7	A8MTY7	169 aa		10.86	□□□□□ -0.67
NECAB3-222	ENST00000607805	KRTAP9-8	Q9BYQ0	159 aa		10.86	□□□□□ -0.67
NECAB3-222	ENST00000607805	TRBV7-7	A0A0K0K1E9	115 aa		10.84	□□□□□ -0.67
NECAB3-222	ENST00000607805	TRAV13-2	A0A0B4J235	113 aa		10.83	□□□□□ -0.68
NECAB3-222	ENST00000607805		Q6Q795	121 aa		10.83	□□□□□ -0.68
NECAB3-222	ENST00000607805	ATP11AUN	Q6ZP68	121 aa		10.83	□□□□□ -0.68
NECAB3-222	ENST00000607805	OBSCN-AS1	Q96MR7	158 aa		10.83	□□□□□ -0.68
NECAB3-222	ENST00000607805	HSBP1L1	C9JCN9	74 aa		10.82	□□□□□ -0.68
NECAB3-222	ENST00000607805		F8WEM9	126 aa		10.82	□□□□□ -0.68
NECAB3-222	ENST00000607805		Q6JHZ5	121 aa		10.82	□□□□□ -0.68
NECAB3-222	ENST00000607805	IGFL1	Q6UW32	110 aa		10.81	□□□□□ -0.68
NECAB3-222	ENST00000607805	CLEC2B	Q92478	149 aa		10.81	□□□□□ -0.68
NECAB3-222	ENST00000607805	LINC00575	Q6W349	94 aa		10.8	□□□□□ -0.68
NECAB3-222	ENST00000607805	CFC1	P0CG37	223 aa		10.79	□□□□□ -0.68
NECAB3-222	ENST00000607805		Q6ZQY7	126 aa		10.77	□□□□□ -0.69
NECAB3-222	ENST00000607805	OCIAD2	Q56VL3	154 aa		10.76	□□□□□ -0.69
NECAB3-222	ENST00000607805	SCGB1D1	O95968	90 aa		10.75	□□□□□ -0.69
NECAB3-222	ENST00000607805	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	10.75	□□□□□ -0.69
NECAB3-222	ENST00000607805	VAMP3	Q15836	100 aa		10.74	□□□□□ -0.69
NECAB3-222	ENST00000607805	hADV29S1	A0JD25	119 aa		10.73	□□□□□ -0.69
NECAB3-222	ENST00000607805	C20orf166-AS1	Q96NR2	134 aa		10.71	□□□□□ -0.69
NECAB3-222	ENST00000607805		Q96NJ1	140 aa		10.69	□□□□□ -0.7
NECAB3-222	ENST00000607805		A8MUU9	505 aa		10.68	□□□□□ -0.7
NECAB3-222	ENST00000607805	LST1	O00453	97 aa		10.68	□□□□□ -0.7
NECAB3-222	ENST00000607805	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	10.67	□□□□□ -0.7
NECAB3-222	ENST00000607805	PPDPFL	Q8WWR9	84 aa		10.66	□□□□□ -0.7
NECAB3-222	ENST00000607805	COX8A	P10176	69 aa		10.63	□□□□□ -0.71
NECAB3-222	ENST00000607805	HIST1H4G	Q99525	98 aa		10.63	□□□□□ -0.71
NECAB3-222	ENST00000607805		H3BUT2	72 aa		10.62	□□□□□ -0.71
NECAB3-222	ENST00000607805	MT2A	P02795	61 aa		10.62	□□□□□ -0.71
NECAB3-222	ENST00000607805	SNHG12	Q9BXW3	62 aa		10.59	□□□□□ -0.71
NECAB3-222	ENST00000607805	LCE2B	O14633	110 aa		10.58	□□□□□ -0.72
NECAB3-222	ENST00000607805	DLEU1	O43261	78 aa		10.58	□□□□□ -0.72
NECAB3-222	ENST00000607805	C12orf57	Q99622	126 aa		10.58	□□□□□ -0.72
NECAB3-222	ENST00000607805	SS18L2	Q9UHA2	77 aa		10.58	□□□□□ -0.72
NECAB3-222	ENST00000607805	TRBV20-1	A0A075B6N2	111 aa		10.57	□□□□□ -0.72
NECAB3-222	ENST00000607805	C14orf144	Q96I85	54 aa		10.57	□□□□□ -0.72
NECAB3-222	ENST00000607805	PAM16	Q9Y3D7	125 aa		10.57	□□□□□ -0.72
NECAB3-222	ENST00000607805	SPATA45	Q537H7	98 aa		10.56	□□□□□ -0.72
NECAB3-222	ENST00000607805	KRTAP16-1	A8MUX0	517 aa		10.55	□□□□□ -0.72
NECAB3-222	ENST00000607805	BVES-AS1	Q5T3Y7	98 aa		10.55	□□□□□ -0.72
NECAB3-222	ENST00000607805	MT1F	P04733	61 aa		10.54	□□□□□ -0.72
NECAB3-222	ENST00000607805	KRTAP19-1	Q8IUB9	90 aa		10.54	□□□□□ -0.72
NECAB3-222	ENST00000607805	TEN1	Q86WV5	123 aa		10.53	□□□□□ -0.72
NECAB3-222	ENST00000607805	VAMP8	Q9BV40	100 aa		10.53	□□□□□ -0.72
NECAB3-222	ENST00000607805	KRTAP9-3	Q9BYQ3	159 aa		10.53	□□□□□ -0.72
NECAB3-222	ENST00000607805	HIGD1B	Q9P298	99 aa		10.51	□□□□□ -0.73
NECAB3-222	ENST00000607805	MPLKIP	Q8TAP9	179 aa		10.5	□□□□□ -0.73
NECAB3-222	ENST00000607805	RAB37	Q96AX2	223 aa		10.49	□□□□□ -0.73
NECAB3-222	ENST00000607805	DSCR10	P59022	87 aa		10.48	□□□□□ -0.73
NECAB3-222	ENST00000607805		A0A087WSZ3	146 aa		10.47	□□□□□ -0.73
NECAB3-222	ENST00000607805	NDUFV3	P56181	108 aa	Known RBP	10.45	□□□□□ -0.74
NECAB3-222	ENST00000607805	C2orf91	Q6ZV80	131 aa		10.45	□□□□□ -0.74
NECAB3-222	ENST00000607805	HRES1	P13985	223 aa		10.44	□□□□□ -0.74
NECAB3-222	ENST00000607805		A0A0B4J2C4	111 aa		10.43	□□□□□ -0.74
NECAB3-222	ENST00000607805	CEND1	Q8N111	149 aa		10.42	□□□□□ -0.74
NECAB3-222	ENST00000607805	FAM218A	Q96MZ4	157 aa		10.42	□□□□□ -0.74
NECAB3-222	ENST00000607805	FAM236D	A0A1B0GTK5	79 aa		10.4	□□□□□ -0.74
NECAB3-222	ENST00000607805	SNCG	O76070	127 aa		10.4	□□□□□ -0.74
NECAB3-222	ENST00000607805	FAM236C	P0DP71	79 aa		10.4	□□□□□ -0.74
NECAB3-222	ENST00000607805	KRTAP10-10	P60014	251 aa		10.4	□□□□□ -0.74
NECAB3-222	ENST00000607805		H0YGX0	51 aa		10.39	□□□□□ -0.75
NECAB3-222	ENST00000607805	MACF1	Q9UPN3	7388 aa	Known RBP	10.39	□□□□□ -0.75
NECAB3-222	ENST00000607805	TMEM238L	A0A1B0GVL6	79 aa		10.38	□□□□□ -0.75
NECAB3-222	ENST00000607805		A0A1W2PNM2	257 aa		10.38	□□□□□ -0.75
NECAB3-222	ENST00000607805		A6NJY4	79 aa		10.38	□□□□□ -0.75
NECAB3-222	ENST00000607805	LINC00313	P59037	77 aa		10.38	□□□□□ -0.75
NECAB3-222	ENST00000607805		H3BMG7	143 aa		10.37	□□□□□ -0.75
NECAB3-222	ENST00000607805	PYY3	Q5JQD4	70 aa		10.37	□□□□□ -0.75
NECAB3-222	ENST00000607805	NOTCH2NL	Q7Z3S9	236 aa		10.36	□□□□□ -0.75
NECAB3-222	ENST00000607805	SIGMAR1	Q99720	223 aa		10.36	□□□□□ -0.75
NECAB3-222	ENST00000607805	RBM12B-AS1	Q9P1G2	102 aa		10.36	□□□□□ -0.75
NECAB3-222	ENST00000607805	PRO1854	Q9UHT4	67 aa		10.36	□□□□□ -0.75
NECAB3-222	ENST00000607805	TMA7	Q9Y2S6	64 aa	Known RBP	10.35	□□□□□ -0.75
NECAB3-222	ENST00000607805	FXYD2	P54710	66 aa		10.34	□□□□□ -0.75
NECAB3-222	ENST00000607805	SYNE2	Q8WXH0	6885 aa	Known RBP	10.33	□□□□□ -0.76
NECAB3-222	ENST00000607805		A0A1B0GX51	115 aa		10.3	□□□□□ -0.76
NECAB3-222	ENST00000607805	IGKV4-1	P06312	121 aa		10.3	□□□□□ -0.76
NECAB3-222	ENST00000607805	HSD52	Q0P140	79 aa		10.29	□□□□□ -0.76
NECAB3-222	ENST00000607805	FABP2	P12104	132 aa		10.27	□□□□□ -0.77
NECAB3-222	ENST00000607805	KRTAP19-6	Q3LI70	58 aa		10.27	□□□□□ -0.77
NECAB3-222	ENST00000607805	LINC00472	Q9H8W2	130 aa		10.27	□□□□□ -0.77
NECAB3-222	ENST00000607805	TRBV7-4	A0A0J9YYF1	115 aa		10.26	□□□□□ -0.77
NECAB3-222	ENST00000607805	TRIAP1	O43715	76 aa		10.26	□□□□□ -0.77
NECAB3-222	ENST00000607805	GHRH	P01286	108 aa		10.26	□□□□□ -0.77
NECAB3-222	ENST00000607805	UQCR10	Q9UDW1	63 aa		10.24	□□□□□ -0.77
NECAB3-222	ENST00000607805		K7ERJ3	54 aa		10.22	□□□□□ -0.77
NECAB3-222	ENST00000607805	PSMB2	P49721	201 aa		10.22	□□□□□ -0.77
NECAB3-222	ENST00000607805	DEFB116	Q30KQ4	102 aa		10.21	□□□□□ -0.77
NECAB3-222	ENST00000607805	ANKRD29	Q8N6D5	301 aa		10.2	□□□□□ -0.78
NECAB3-222	ENST00000607805	IGHV6-1	A0A0B4J1U7	121 aa		10.18	□□□□□ -0.78

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