RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 C12orf57Q99622 126 aa13.23□□□□□ -0.29
SSX2IP-209ENST00000603677 H0YGX0 51 aa13.22□□□□□ -0.29
SSX2IP-209ENST00000603677 C2orf91Q6ZV80 131 aa13.22□□□□□ -0.29
SSX2IP-209ENST00000603677 MUC2Q02817 5179 aa13.22□□□□□ -0.29
SSX2IP-209ENST00000603677 Q6JHZ5 121 aa13.21□□□□□ -0.29
SSX2IP-209ENST00000603677 HRCT1Q6UXD1 115 aa13.21□□□□□ -0.29
SSX2IP-209ENST00000603677 IGLV8-61A0A075B6I0 122 aa13.2□□□□□ -0.3
SSX2IP-209ENST00000603677 ASB16-AS1Q495Z4 193 aa13.2□□□□□ -0.3
SSX2IP-209ENST00000603677 OCIAD2Q56VL3 154 aa13.2□□□□□ -0.3
SSX2IP-209ENST00000603677 CEND1Q8N111 149 aa13.2□□□□□ -0.3
SSX2IP-209ENST00000603677 SEC61BP60468 96 aaKnown RBP13.18□□□□□ -0.3
SSX2IP-209ENST00000603677 GHRHP01286 108 aa13.16□□□□□ -0.3
SSX2IP-209ENST00000603677 PYY3Q5JQD4 70 aa13.16□□□□□ -0.3
SSX2IP-209ENST00000603677 TCL1BO95988 128 aa13.15□□□□□ -0.3
SSX2IP-209ENST00000603677 XP32Q5T750 250 aa13.15□□□□□ -0.3
SSX2IP-209ENST00000603677 A0A1B0GX51 115 aa13.14□□□□□ -0.31
SSX2IP-209ENST00000603677 PRO1854Q9UHT4 67 aa13.14□□□□□ -0.31
SSX2IP-209ENST00000603677 SNHG12Q9BXW3 62 aa13.12□□□□□ -0.31
SSX2IP-209ENST00000603677 CLEC2BQ92478 149 aa13.11□□□□□ -0.31
SSX2IP-209ENST00000603677 MUC17Q685J3 4493 aa13.11□□□□□ -0.31
SSX2IP-209ENST00000603677 HSD52Q0P140 79 aa13.08□□□□□ -0.32
SSX2IP-209ENST00000603677 C1orf195Q5TG92 126 aa13.08□□□□□ -0.32
SSX2IP-209ENST00000603677 FXYD2P54710 66 aa13.05□□□□□ -0.32
SSX2IP-209ENST00000603677 IGFL1Q6UW32 110 aa13.04□□□□□ -0.32
SSX2IP-209ENST00000603677 UQCR10Q9UDW1 63 aa13.03□□□□□ -0.32
SSX2IP-209ENST00000603677 A0A0G2JQZ4 141 aa13.02□□□□□ -0.33
SSX2IP-209ENST00000603677 TRBV7-7A0A0K0K1E9 115 aa13.02□□□□□ -0.33
SSX2IP-209ENST00000603677 TMA7Q9Y2S6 64 aaKnown RBP13.02□□□□□ -0.33
SSX2IP-209ENST00000603677 H3BQ85 93 aa13.01□□□□□ -0.33
SSX2IP-209ENST00000603677 FAM218AQ96MZ4 157 aa12.99□□□□□ -0.33
SSX2IP-209ENST00000603677 Q6Q795 121 aa12.98□□□□□ -0.33
SSX2IP-209ENST00000603677 COX6CP09669 75 aa12.97□□□□□ -0.33
SSX2IP-209ENST00000603677 NDUFV3P56181 108 aaKnown RBP12.96□□□□□ -0.33
SSX2IP-209ENST00000603677 TRIAP1O43715 76 aa12.95□□□□□ -0.34
SSX2IP-209ENST00000603677 SS18L2Q9UHA2 77 aa12.93□□□□□ -0.34
SSX2IP-209ENST00000603677 C9orf92A6NGG3 77 aa12.92□□□□□ -0.34
SSX2IP-209ENST00000603677 TEN1Q86WV5 123 aa12.92□□□□□ -0.34
SSX2IP-209ENST00000603677 DNAL4O96015 105 aa12.91□□□□□ -0.34
SSX2IP-209ENST00000603677 PSMB2P49721 201 aa12.9□□□□□ -0.34
SSX2IP-209ENST00000603677 LCE2AQ5TA79 106 aaPredicted RBP12.9□□□□□ -0.34
SSX2IP-209ENST00000603677 H3BUT2 72 aa12.89□□□□□ -0.35
SSX2IP-209ENST00000603677 H3BMG7 143 aa12.87□□□□□ -0.35
SSX2IP-209ENST00000603677 TMEM256-PLSCR3K7ERE1 68 aa12.86□□□□□ -0.35
SSX2IP-209ENST00000603677 LST1O00453 97 aa12.86□□□□□ -0.35
SSX2IP-209ENST00000603677 FABP2P12104 132 aa12.86□□□□□ -0.35
SSX2IP-209ENST00000603677 ORMDL1Q9P0S3 153 aa12.86□□□□□ -0.35
SSX2IP-209ENST00000603677 FAT4Q6V0I7 4981 aa12.86□□□□□ -0.35
SSX2IP-209ENST00000603677 KRTAP4-1Q9BYQ7 146 aa12.83□□□□□ -0.36
SSX2IP-209ENST00000603677 K7ERJ3 54 aa12.82□□□□□ -0.36
SSX2IP-209ENST00000603677 PCOTHQ58A44 107 aa12.81□□□□□ -0.36
SSX2IP-209ENST00000603677 RPL37P61927 97 aaKnown RBP12.8□□□□□ -0.36
SSX2IP-209ENST00000603677 TRACP01848 142 aa12.79□□□□□ -0.36
SSX2IP-209ENST00000603677 UBE2V1Q13404 147 aa12.76□□□□□ -0.37
SSX2IP-209ENST00000603677 SMIM6P0DI80 62 aa12.75□□□□□ -0.37
SSX2IP-209ENST00000603677 TRBV7-4A0A0J9YYF1 115 aa12.74□□□□□ -0.37
SSX2IP-209ENST00000603677 M0R143 59 aa12.74□□□□□ -0.37
SSX2IP-209ENST00000603677 ANKRD29Q8N6D5 301 aa12.74□□□□□ -0.37
SSX2IP-209ENST00000603677 A0A087WSZ3 146 aa12.73□□□□□ -0.37
SSX2IP-209ENST00000603677 SCGB1C2P0DMR2 95 aa12.73□□□□□ -0.37
SSX2IP-209ENST00000603677 A0A1W2PNM2 257 aa12.69□□□□□ -0.38
SSX2IP-209ENST00000603677 Q75L30 129 aa12.68□□□□□ -0.38
SSX2IP-209ENST00000603677 OBSCN-AS1Q96MR7 158 aa12.65□□□□□ -0.38
SSX2IP-209ENST00000603677 C21orf62-AS1Q17RA5 79 aa12.63□□□□□ -0.39
SSX2IP-209ENST00000603677 Q96NJ1 140 aa12.63□□□□□ -0.39
SSX2IP-209ENST00000603677 CCKP06307 115 aa12.61□□□□□ -0.39
SSX2IP-209ENST00000603677 RBM3P98179 157 aaKnown RBP12.61□□□□□ -0.39
SSX2IP-209ENST00000603677 ATP11AUNQ6ZP68 121 aa12.61□□□□□ -0.39
SSX2IP-209ENST00000603677 TSTD3H0UI37 97 aa12.58□□□□□ -0.4
SSX2IP-209ENST00000603677 DSCR8Q96T75 97 aa12.58□□□□□ -0.4
SSX2IP-209ENST00000603677 BAALC-AS2P0C853 105 aa12.56□□□□□ -0.4
SSX2IP-209ENST00000603677 ATXN8Q156A1 80 aa12.56□□□□□ -0.4
SSX2IP-209ENST00000603677 C20orf166-AS1Q96NR2 134 aa12.56□□□□□ -0.4
SSX2IP-209ENST00000603677 LCE2CQ5TA81 110 aa12.55□□□□□ -0.4
SSX2IP-209ENST00000603677 LYRM7Q5U5X0 104 aa12.55□□□□□ -0.4
SSX2IP-209ENST00000603677 KRTAP19-2Q3LHN2 52 aa12.54□□□□□ -0.4
SSX2IP-209ENST00000603677 LINC00472Q9H8W2 130 aa12.52□□□□□ -0.41
SSX2IP-209ENST00000603677 A0A1B0GV72 72 aa12.51□□□□□ -0.41
SSX2IP-209ENST00000603677 A8MUU9 505 aa12.51□□□□□ -0.41
SSX2IP-209ENST00000603677 JMJD7-PLA2G4BH0Y9G9 81 aa12.51□□□□□ -0.41
SSX2IP-209ENST00000603677 IGKV4-1P06312 121 aa12.51□□□□□ -0.41
SSX2IP-209ENST00000603677 SIGMAR1Q99720 223 aa12.51□□□□□ -0.41
SSX2IP-209ENST00000603677 KRTAP9-2Q9BYQ4 174 aa12.51□□□□□ -0.41
SSX2IP-209ENST00000603677 A0A1B0GW54 56 aa12.5□□□□□ -0.41
SSX2IP-209ENST00000603677 C9JAW5 83 aa12.5□□□□□ -0.41
SSX2IP-209ENST00000603677 LINC00313P59037 77 aa12.49□□□□□ -0.41
SSX2IP-209ENST00000603677 TRBV20-1A0A075B6N2 111 aa12.48□□□□□ -0.41
SSX2IP-209ENST00000603677 PDE6GP18545 87 aa12.46□□□□□ -0.41
SSX2IP-209ENST00000603677 VPS25Q9BRG1 176 aa12.43□□□□□ -0.42
SSX2IP-209ENST00000603677 J3KT08 172 aa12.42□□□□□ -0.42
SSX2IP-209ENST00000603677 LOC105371267A0A1B0GV96 52 aa12.41□□□□□ -0.42
SSX2IP-209ENST00000603677 DSCR10P59022 87 aa12.41□□□□□ -0.42
SSX2IP-209ENST00000603677 MT1HP80294 61 aa12.4□□□□□ -0.42
SSX2IP-209ENST00000603677 LOC110117498A0A087WWA1 95 aa12.39□□□□□ -0.43
SSX2IP-209ENST00000603677 COX6B2Q6YFQ2 88 aa12.38□□□□□ -0.43
SSX2IP-209ENST00000603677 Q6ZQT0 140 aa12.38□□□□□ -0.43
SSX2IP-209ENST00000603677 NAA38Q9BRA0 125 aaKnown RBP12.38□□□□□ -0.43
SSX2IP-209ENST00000603677 C8orf87E5RJ46 101 aa12.37□□□□□ -0.43
SSX2IP-209ENST00000603677 KRTAP16-1A8MUX0 517 aa12.35□□□□□ -0.43
SSX2IP-209ENST00000603677 DEFB116Q30KQ4 102 aa12.34□□□□□ -0.43
SSX2IP-209ENST00000603677 BATFQ16520 125 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms