RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 F8WEM9 126 aa11.48□□□□□ -0.57
PPFIA3-209ENST00000602783 KRTAP19-2Q3LHN2 52 aa11.48□□□□□ -0.57
PPFIA3-209ENST00000602783 Q6ZQY7 126 aa11.48□□□□□ -0.57
PPFIA3-209ENST00000602783 hADV29S1A0JD25 119 aa11.47□□□□□ -0.57
PPFIA3-209ENST00000602783 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
PPFIA3-209ENST00000602783 COX8AP10176 69 aa11.46□□□□□ -0.57
PPFIA3-209ENST00000602783 MT1HP80294 61 aa11.42□□□□□ -0.58
PPFIA3-209ENST00000602783 TCL1BO95988 128 aa11.41□□□□□ -0.58
PPFIA3-209ENST00000602783 DLEU1O43261 78 aa11.4□□□□□ -0.58
PPFIA3-209ENST00000602783 BVES-AS1Q5T3Y7 98 aa11.4□□□□□ -0.58
PPFIA3-209ENST00000602783 Q6JHZ5 121 aa11.38□□□□□ -0.59
PPFIA3-209ENST00000602783 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.38□□□□□ -0.59
PPFIA3-209ENST00000602783 CLEC2BQ92478 149 aa11.38□□□□□ -0.59
PPFIA3-209ENST00000602783 IGFL1Q6UW32 110 aa11.37□□□□□ -0.59
PPFIA3-209ENST00000602783 C14orf144Q96I85 54 aa11.36□□□□□ -0.59
PPFIA3-209ENST00000602783 CRCT1Q9UGL9 99 aa11.35□□□□□ -0.59
PPFIA3-209ENST00000602783 PAM16Q9Y3D7 125 aa11.35□□□□□ -0.59
PPFIA3-209ENST00000602783 SPATA45Q537H7 98 aa11.34□□□□□ -0.59
PPFIA3-209ENST00000602783 OCIAD2Q56VL3 154 aa11.34□□□□□ -0.59
PPFIA3-209ENST00000602783 PPDPFLQ8WWR9 84 aa11.34□□□□□ -0.59
PPFIA3-209ENST00000602783 FSIP2Q5CZC0 6907 aa11.33□□□□□ -0.6
PPFIA3-209ENST00000602783 TRBV7-7A0A0K0K1E9 115 aa11.33□□□□□ -0.6
PPFIA3-209ENST00000602783 CFC1BP0CG36 223 aa11.33□□□□□ -0.6
PPFIA3-209ENST00000602783 CFC1P0CG37 223 aa11.33□□□□□ -0.6
PPFIA3-209ENST00000602783 RPL37P61927 97 aaKnown RBP11.32□□□□□ -0.6
PPFIA3-209ENST00000602783 RAB37Q96AX2 223 aa11.32□□□□□ -0.6
PPFIA3-209ENST00000602783 HIGD1BQ9P298 99 aa11.32□□□□□ -0.6
PPFIA3-209ENST00000602783 C2orf91Q6ZV80 131 aa11.3□□□□□ -0.6
PPFIA3-209ENST00000602783 VAMP8Q9BV40 100 aa11.3□□□□□ -0.6
PPFIA3-209ENST00000602783 SNHG12Q9BXW3 62 aa11.3□□□□□ -0.6
PPFIA3-209ENST00000602783 A0A0B4J2C4 111 aa11.29□□□□□ -0.6
PPFIA3-209ENST00000602783 H3BUT2 72 aa11.28□□□□□ -0.6
PPFIA3-209ENST00000602783 LORP23490 312 aaPredicted RBP11.24□□□□□ -0.61
PPFIA3-209ENST00000602783 KRTAP10-6P60371 365 aaPredicted RBP11.24□□□□□ -0.61
PPFIA3-209ENST00000602783 FAM218AQ96MZ4 157 aa11.24□□□□□ -0.61
PPFIA3-209ENST00000602783 H0YGX0 51 aa11.23□□□□□ -0.61
PPFIA3-209ENST00000602783 COX6B2Q6YFQ2 88 aa11.23□□□□□ -0.61
PPFIA3-209ENST00000602783 LOC105371267A0A1B0GV96 52 aa11.22□□□□□ -0.61
PPFIA3-209ENST00000602783 M0R2T5 61 aa11.22□□□□□ -0.61
PPFIA3-209ENST00000602783 SNCGO76070 127 aa11.22□□□□□ -0.61
PPFIA3-209ENST00000602783 CEND1Q8N111 149 aa11.22□□□□□ -0.61
PPFIA3-209ENST00000602783 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
PPFIA3-209ENST00000602783 A6NJY4 79 aa11.18□□□□□ -0.62
PPFIA3-209ENST00000602783 LST1O00453 97 aa11.18□□□□□ -0.62
PPFIA3-209ENST00000602783 FXYD2P54710 66 aa11.17□□□□□ -0.62
PPFIA3-209ENST00000602783 NDUFV3P56181 108 aaKnown RBP11.17□□□□□ -0.62
PPFIA3-209ENST00000602783 OBSCN-AS1Q96MR7 158 aa11.17□□□□□ -0.62
PPFIA3-209ENST00000602783 PRO1854Q9UHT4 67 aa11.17□□□□□ -0.62
PPFIA3-209ENST00000602783 Q6Q795 121 aa11.15□□□□□ -0.62
PPFIA3-209ENST00000602783 SS18L2Q9UHA2 77 aa11.15□□□□□ -0.62
PPFIA3-209ENST00000602783 A0A1B0GX51 115 aa11.14□□□□□ -0.63
PPFIA3-209ENST00000602783 FLGP20930 4061 aaPredicted RBP11.14□□□□□ -0.63
PPFIA3-209ENST00000602783 TEN1Q86WV5 123 aa11.13□□□□□ -0.63
PPFIA3-209ENST00000602783 TRIAP1O43715 76 aa11.12□□□□□ -0.63
PPFIA3-209ENST00000602783 H3BMG7 143 aa11.1□□□□□ -0.63
PPFIA3-209ENST00000602783 FABP2P12104 132 aa11.1□□□□□ -0.63
PPFIA3-209ENST00000602783 PYY3Q5JQD4 70 aa11.1□□□□□ -0.63
PPFIA3-209ENST00000602783 Q75L30 129 aa11.1□□□□□ -0.63
PPFIA3-209ENST00000602783 A0A087WSZ3 146 aa11.09□□□□□ -0.63
PPFIA3-209ENST00000602783 GHRHP01286 108 aa11.09□□□□□ -0.63
PPFIA3-209ENST00000602783 ATP11AUNQ6ZP68 121 aa11.08□□□□□ -0.64
PPFIA3-209ENST00000602783 HSD52Q0P140 79 aa11.07□□□□□ -0.64
PPFIA3-209ENST00000602783 K7ERJ3 54 aa11.05□□□□□ -0.64
PPFIA3-209ENST00000602783 Q96NJ1 140 aa11.05□□□□□ -0.64
PPFIA3-209ENST00000602783 SMIM6P0DI80 62 aa11.04□□□□□ -0.64
PPFIA3-209ENST00000602783 DNAL4O96015 105 aa11.02□□□□□ -0.65
PPFIA3-209ENST00000602783 A0A1W2PNM2 257 aa11.01□□□□□ -0.65
PPFIA3-209ENST00000602783 PSMB2P49721 201 aa11.01□□□□□ -0.65
PPFIA3-209ENST00000602783 A0A1B0GV72 72 aa11□□□□□ -0.65
PPFIA3-209ENST00000602783 ORMDL1Q9P0S3 153 aa11□□□□□ -0.65
PPFIA3-209ENST00000602783 C20orf166-AS1Q96NR2 134 aa10.98□□□□□ -0.65
PPFIA3-209ENST00000602783 SIGMAR1Q99720 223 aa10.97□□□□□ -0.65
PPFIA3-209ENST00000602783 A8MUU9 505 aa10.95□□□□□ -0.66
PPFIA3-209ENST00000602783 COX6CP09669 75 aa10.95□□□□□ -0.66
PPFIA3-209ENST00000602783 DSCR10P59022 87 aa10.95□□□□□ -0.66
PPFIA3-209ENST00000602783 ANKRD29Q8N6D5 301 aa10.95□□□□□ -0.66
PPFIA3-209ENST00000602783 H3BQ85 93 aa10.94□□□□□ -0.66
PPFIA3-209ENST00000602783 UQCR10Q9UDW1 63 aa10.94□□□□□ -0.66
PPFIA3-209ENST00000602783 TRBV7-4A0A0J9YYF1 115 aa10.92□□□□□ -0.66
PPFIA3-209ENST00000602783 TMEM256-PLSCR3K7ERE1 68 aa10.92□□□□□ -0.66
PPFIA3-209ENST00000602783 IGKV4-1P06312 121 aa10.88□□□□□ -0.67
PPFIA3-209ENST00000602783 CCKP06307 115 aa10.87□□□□□ -0.67
PPFIA3-209ENST00000602783 TRACP01848 142 aa10.85□□□□□ -0.67
PPFIA3-209ENST00000602783 UBE2V1Q13404 147 aa10.85□□□□□ -0.67
PPFIA3-209ENST00000602783 LINC00313P59037 77 aa10.83□□□□□ -0.68
PPFIA3-209ENST00000602783 DEFB116Q30KQ4 102 aa10.83□□□□□ -0.68
PPFIA3-209ENST00000602783 TRBV20-1A0A075B6N2 111 aa10.82□□□□□ -0.68
PPFIA3-209ENST00000602783 KRTAP16-1A8MUX0 517 aa10.82□□□□□ -0.68
PPFIA3-209ENST00000602783 SCGB1C2P0DMR2 95 aa10.82□□□□□ -0.68
PPFIA3-209ENST00000602783 LINC00472Q9H8W2 130 aa10.82□□□□□ -0.68
PPFIA3-209ENST00000602783 TSTD3H0UI37 97 aa10.81□□□□□ -0.68
PPFIA3-209ENST00000602783 VPS25Q9BRG1 176 aa10.79□□□□□ -0.68
PPFIA3-209ENST00000602783 NOTCH2NLQ7Z3S9 236 aa10.78□□□□□ -0.68
PPFIA3-209ENST00000602783 KRTAP9-8Q9BYQ0 159 aa10.77□□□□□ -0.69
PPFIA3-209ENST00000602783 IGHV6-1A0A0B4J1U7 121 aa10.76□□□□□ -0.69
PPFIA3-209ENST00000602783 RBM3P98179 157 aaKnown RBP10.76□□□□□ -0.69
PPFIA3-209ENST00000602783 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
PPFIA3-209ENST00000602783 BAALC-AS2P0C853 105 aa10.7□□□□□ -0.7
PPFIA3-209ENST00000602783 A0A1B0GVX0 72 aa10.69□□□□□ -0.7
PPFIA3-209ENST00000602783 PCP4L1A6NKN8 68 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms