RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 VAMP8Q9BV40 100 aa8.12□□□□□ -1.11
SHKBP1-226ENST00000600791 TSTD3H0UI37 97 aa8.11□□□□□ -1.11
SHKBP1-226ENST00000600791 PCP4L1A6NKN8 68 aa8.1□□□□□ -1.11
SHKBP1-226ENST00000600791 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
SHKBP1-226ENST00000600791 F8WEM9 126 aa8.07□□□□□ -1.12
SHKBP1-226ENST00000600791 VAMP3Q15836 100 aa8.07□□□□□ -1.12
SHKBP1-226ENST00000600791 LINC00575Q6W349 94 aa8.07□□□□□ -1.12
SHKBP1-226ENST00000600791 PAM16Q9Y3D7 125 aa8.07□□□□□ -1.12
SHKBP1-226ENST00000600791 MT1HP80294 61 aa8.06□□□□□ -1.12
SHKBP1-226ENST00000600791 SPATA45Q537H7 98 aa8.06□□□□□ -1.12
SHKBP1-226ENST00000600791 LCE2DQ5TA82 110 aaPredicted RBP8.06□□□□□ -1.12
SHKBP1-226ENST00000600791 Q6ZQY7 126 aa8.06□□□□□ -1.12
SHKBP1-226ENST00000600791 TCL1BO95988 128 aa8.05□□□□□ -1.12
SHKBP1-226ENST00000600791 hADV29S1A0JD25 119 aa8.04□□□□□ -1.12
SHKBP1-226ENST00000600791 RPL37P61927 97 aaKnown RBP8.04□□□□□ -1.12
SHKBP1-226ENST00000600791 FSIP2Q5CZC0 6907 aa8.04□□□□□ -1.12
SHKBP1-226ENST00000600791 CLEC2BQ92478 149 aa8.01□□□□□ -1.13
SHKBP1-226ENST00000600791 UQCR10Q9UDW1 63 aa8.01□□□□□ -1.13
SHKBP1-226ENST00000600791 Q6JHZ5 121 aa8□□□□□ -1.13
SHKBP1-226ENST00000600791 IGFL1Q6UW32 110 aa8□□□□□ -1.13
SHKBP1-226ENST00000600791 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
SHKBP1-226ENST00000600791 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.98□□□□□ -1.13
SHKBP1-226ENST00000600791 CFC1BP0CG36 223 aa7.97□□□□□ -1.13
SHKBP1-226ENST00000600791 OCIAD2Q56VL3 154 aa7.97□□□□□ -1.13
SHKBP1-226ENST00000600791 BVES-AS1Q5T3Y7 98 aa7.97□□□□□ -1.13
SHKBP1-226ENST00000600791 HIST1H4GQ99525 98 aa7.97□□□□□ -1.13
SHKBP1-226ENST00000600791 C14orf144Q96I85 54 aa7.96□□□□□ -1.14
SHKBP1-226ENST00000600791 COX8AP10176 69 aa7.95□□□□□ -1.14
SHKBP1-226ENST00000600791 PPDPFLQ8WWR9 84 aa7.95□□□□□ -1.14
SHKBP1-226ENST00000600791 DLEU1O43261 78 aa7.93□□□□□ -1.14
SHKBP1-226ENST00000600791 LORP23490 312 aaPredicted RBP7.93□□□□□ -1.14
SHKBP1-226ENST00000600791 H3BUT2 72 aa7.92□□□□□ -1.14
SHKBP1-226ENST00000600791 KRTAP10-6P60371 365 aaPredicted RBP7.92□□□□□ -1.14
SHKBP1-226ENST00000600791 SNHG12Q9BXW3 62 aa7.92□□□□□ -1.14
SHKBP1-226ENST00000600791 COX6B2Q6YFQ2 88 aa7.91□□□□□ -1.14
SHKBP1-226ENST00000600791 OBSCN-AS1Q96MR7 158 aa7.91□□□□□ -1.14
SHKBP1-226ENST00000600791 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
SHKBP1-226ENST00000600791 CFC1P0CG37 223 aa7.9□□□□□ -1.14
SHKBP1-226ENST00000600791 CRCT1Q9UGL9 99 aa7.9□□□□□ -1.14
SHKBP1-226ENST00000600791 M0R143 59 aa7.89□□□□□ -1.15
SHKBP1-226ENST00000600791 M0R2T5 61 aa7.88□□□□□ -1.15
SHKBP1-226ENST00000600791 LST1O00453 97 aa7.88□□□□□ -1.15
SHKBP1-226ENST00000600791 RAB37Q96AX2 223 aa7.88□□□□□ -1.15
SHKBP1-226ENST00000600791 Q75L30 129 aa7.87□□□□□ -1.15
SHKBP1-226ENST00000600791 FAM218AQ96MZ4 157 aa7.87□□□□□ -1.15
SHKBP1-226ENST00000600791 A0A0B4J2C4 111 aa7.86□□□□□ -1.15
SHKBP1-226ENST00000600791 HIGD1BQ9P298 99 aa7.86□□□□□ -1.15
SHKBP1-226ENST00000600791 Q6Q795 121 aa7.85□□□□□ -1.15
SHKBP1-226ENST00000600791 ATP11AUNQ6ZP68 121 aa7.85□□□□□ -1.15
SHKBP1-226ENST00000600791 C2orf91Q6ZV80 131 aa7.85□□□□□ -1.15
SHKBP1-226ENST00000600791 H0YGX0 51 aa7.84□□□□□ -1.15
SHKBP1-226ENST00000600791 SS18L2Q9UHA2 77 aa7.84□□□□□ -1.15
SHKBP1-226ENST00000600791 SNCGO76070 127 aa7.83□□□□□ -1.16
SHKBP1-226ENST00000600791 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
SHKBP1-226ENST00000600791 HSD52Q0P140 79 aa7.82□□□□□ -1.16
SHKBP1-226ENST00000600791 Q96NJ1 140 aa7.82□□□□□ -1.16
SHKBP1-226ENST00000600791 BATFQ16520 125 aa7.81□□□□□ -1.16
SHKBP1-226ENST00000600791 TEN1Q86WV5 123 aa7.81□□□□□ -1.16
SHKBP1-226ENST00000600791 A0A087WSZ3 146 aa7.8□□□□□ -1.16
SHKBP1-226ENST00000600791 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
SHKBP1-226ENST00000600791 CEND1Q8N111 149 aa7.79□□□□□ -1.16
SHKBP1-226ENST00000600791 H3BMG7 143 aa7.78□□□□□ -1.16
SHKBP1-226ENST00000600791 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
SHKBP1-226ENST00000600791 PRO1854Q9UHT4 67 aa7.78□□□□□ -1.16
SHKBP1-226ENST00000600791 A0A1B0GX51 115 aa7.77□□□□□ -1.17
SHKBP1-226ENST00000600791 TMEM238LA0A1B0GVL6 79 aa7.76□□□□□ -1.17
SHKBP1-226ENST00000600791 A6NJY4 79 aa7.76□□□□□ -1.17
SHKBP1-226ENST00000600791 FABP2P12104 132 aa7.76□□□□□ -1.17
SHKBP1-226ENST00000600791 A8MUU9 505 aa7.75□□□□□ -1.17
SHKBP1-226ENST00000600791 GHRHP01286 108 aa7.75□□□□□ -1.17
SHKBP1-226ENST00000600791 FXYD2P54710 66 aa7.75□□□□□ -1.17
SHKBP1-226ENST00000600791 TRIAP1O43715 76 aa7.74□□□□□ -1.17
SHKBP1-226ENST00000600791 A0A1W2PNM2 257 aa7.73□□□□□ -1.17
SHKBP1-226ENST00000600791 DSCR10P59022 87 aa7.72□□□□□ -1.17
SHKBP1-226ENST00000600791 SIGMAR1Q99720 223 aa7.71□□□□□ -1.18
SHKBP1-226ENST00000600791 A0A1B0GV72 72 aa7.68□□□□□ -1.18
SHKBP1-226ENST00000600791 A0A1B0GV90 55 aa7.68□□□□□ -1.18
SHKBP1-226ENST00000600791 DNAL4O96015 105 aa7.68□□□□□ -1.18
SHKBP1-226ENST00000600791 ORMDL1Q9P0S3 153 aa7.68□□□□□ -1.18
SHKBP1-226ENST00000600791 TRBV7-4A0A0J9YYF1 115 aa7.67□□□□□ -1.18
SHKBP1-226ENST00000600791 K7ERJ3 54 aa7.67□□□□□ -1.18
SHKBP1-226ENST00000600791 TAX1BP3O14907 124 aa7.67□□□□□ -1.18
SHKBP1-226ENST00000600791 ANKRD29Q8N6D5 301 aa7.67□□□□□ -1.18
SHKBP1-226ENST00000600791 TRBV20-1A0A075B6N2 111 aa7.65□□□□□ -1.18
SHKBP1-226ENST00000600791 IGKV4-1P06312 121 aa7.65□□□□□ -1.18
SHKBP1-226ENST00000600791 PSMB2P49721 201 aa7.65□□□□□ -1.18
SHKBP1-226ENST00000600791 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
SHKBP1-226ENST00000600791 H3BQ85 93 aa7.64□□□□□ -1.19
SHKBP1-226ENST00000600791 LINC00313P59037 77 aa7.64□□□□□ -1.19
SHKBP1-226ENST00000600791 C9orf118A6NHY6 69 aa7.63□□□□□ -1.19
SHKBP1-226ENST00000600791 TMEM256-PLSCR3K7ERE1 68 aa7.62□□□□□ -1.19
SHKBP1-226ENST00000600791 CCKP06307 115 aa7.61□□□□□ -1.19
SHKBP1-226ENST00000600791 COX6CP09669 75 aa7.61□□□□□ -1.19
SHKBP1-226ENST00000600791 DEFB116Q30KQ4 102 aa7.61□□□□□ -1.19
SHKBP1-226ENST00000600791 NOTCH2NLQ7Z3S9 236 aa7.61□□□□□ -1.19
SHKBP1-226ENST00000600791 TRACP01848 142 aa7.6□□□□□ -1.19
SHKBP1-226ENST00000600791 KRTAP9-8Q9BYQ0 159 aa7.6□□□□□ -1.19
SHKBP1-226ENST00000600791 LINC00472Q9H8W2 130 aa7.6□□□□□ -1.19
SHKBP1-226ENST00000600791 UBE2V1Q13404 147 aa7.58□□□□□ -1.2
SHKBP1-226ENST00000600791 A0A1W2PPM0 123 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms