RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 A0A1B0GW54 56 aa10.25□□□□□ -0.77
SYDE1-204ENST00000600440 SMR3AQ99954 134 aa10.25□□□□□ -0.77
SYDE1-204ENST00000600440 SPAG11AQ6PDA7 123 aa10.24□□□□□ -0.77
SYDE1-204ENST00000600440 HELZ2Q9BYK8 2649 aaKnown RBP10.24□□□□□ -0.77
SYDE1-204ENST00000600440 KRTAP4-16G5E9R7 235 aaPredicted RBP10.23□□□□□ -0.77
SYDE1-204ENST00000600440 CASC10Q5T4H9 136 aa10.23□□□□□ -0.77
SYDE1-204ENST00000600440 COA5Q86WW8 74 aa10.23□□□□□ -0.77
SYDE1-204ENST00000600440 H0Y9J4 135 aa10.22□□□□□ -0.77
SYDE1-204ENST00000600440 TENM4Q6N022 2769 aa10.21□□□□□ -0.78
SYDE1-204ENST00000600440 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
SYDE1-204ENST00000600440 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
SYDE1-204ENST00000600440 KRTAP7-1Q8IUC3 87 aa10.19□□□□□ -0.78
SYDE1-204ENST00000600440 FBN1P35555 2871 aaKnown RBP10.19□□□□□ -0.78
SYDE1-204ENST00000600440 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
SYDE1-204ENST00000600440 ATP11AUNQ6ZP68 121 aa10.18□□□□□ -0.78
SYDE1-204ENST00000600440 ANK3Q12955 4377 aaKnown RBP10.17□□□□□ -0.78
SYDE1-204ENST00000600440 SPRR1AP35321 89 aa10.16□□□□□ -0.78
SYDE1-204ENST00000600440 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.78
SYDE1-204ENST00000600440 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.79
SYDE1-204ENST00000600440 KRTAP1-1Q07627 177 aa10.14□□□□□ -0.79
SYDE1-204ENST00000600440 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
SYDE1-204ENST00000600440 Q75L30 129 aa10.14□□□□□ -0.79
SYDE1-204ENST00000600440 MAST4O15021 2626 aa10.12□□□□□ -0.79
SYDE1-204ENST00000600440 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
SYDE1-204ENST00000600440 LOC101927531A0A1B0GV80 90 aa10.12□□□□□ -0.79
SYDE1-204ENST00000600440 A6NN06 94 aa10.12□□□□□ -0.79
SYDE1-204ENST00000600440 COL6A5A8TX70 2615 aa10.11□□□□□ -0.79
SYDE1-204ENST00000600440 NDUFS5O43920 106 aa10.1□□□□□ -0.79
SYDE1-204ENST00000600440 LINC01556Q5JQF7 62 aa10.1□□□□□ -0.79
SYDE1-204ENST00000600440 DEFB131BA0A096LNP1 70 aa10.1□□□□□ -0.79
SYDE1-204ENST00000600440 SPINK7P58062 85 aa10.09□□□□□ -0.79
SYDE1-204ENST00000600440 MOBPQ13875 183 aa10.09□□□□□ -0.79
SYDE1-204ENST00000600440 C9orf163Q8N9P6 203 aa10.09□□□□□ -0.79
SYDE1-204ENST00000600440 CDC42SE1Q9NRR8 79 aa10.09□□□□□ -0.79
SYDE1-204ENST00000600440 CSMD3Q7Z407 3707 aa10.08□□□□□ -0.8
SYDE1-204ENST00000600440 A8MWP4 228 aa10.06□□□□□ -0.8
SYDE1-204ENST00000600440 C11orf45Q8TAV5 145 aa10.06□□□□□ -0.8
SYDE1-204ENST00000600440 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
SYDE1-204ENST00000600440 C7orf65Q6ZTY9 151 aa10.05□□□□□ -0.8
SYDE1-204ENST00000600440 PLA2G2DQ9UNK4 145 aa10.05□□□□□ -0.8
SYDE1-204ENST00000600440 H3BPC8 53 aa10.05□□□□□ -0.8
SYDE1-204ENST00000600440 TLX1NBP0CAT3 122 aa10.05□□□□□ -0.8
SYDE1-204ENST00000600440 NSD1Q96L73 2696 aaPredicted RBP10.04□□□□□ -0.8
SYDE1-204ENST00000600440 OXLD1Q5BKU9 147 aa10.04□□□□□ -0.8
SYDE1-204ENST00000600440 PRAC1Q96KF2 57 aa10.03□□□□□ -0.8
SYDE1-204ENST00000600440 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
SYDE1-204ENST00000600440 IGLV5-37A0A075B6J1 123 aa10.02□□□□□ -0.81
SYDE1-204ENST00000600440 PHF5AQ7RTV0 110 aaKnown RBP10.02□□□□□ -0.81
SYDE1-204ENST00000600440 MMP24-AS1A0A0U1RRL7 71 aa9.98□□□□□ -0.81
SYDE1-204ENST00000600440 LINC00472Q9H8W2 130 aa9.98□□□□□ -0.81
SYDE1-204ENST00000600440 H3BNG1 76 aa9.98□□□□□ -0.81
SYDE1-204ENST00000600440 CHTF8P0CG12 524 aa9.97□□□□□ -0.81
SYDE1-204ENST00000600440 NBEAL1Q6ZS30 2694 aa9.96□□□□□ -0.82
SYDE1-204ENST00000600440 PRR26Q8N8Z3 221 aa9.96□□□□□ -0.82
SYDE1-204ENST00000600440 LINC01558Q9Y6Z2 57 aa9.96□□□□□ -0.82
SYDE1-204ENST00000600440 DNAH10OSP0CZ25 163 aa9.95□□□□□ -0.82
SYDE1-204ENST00000600440 STAB1Q9NY15 2570 aa9.95□□□□□ -0.82
SYDE1-204ENST00000600440 IGHV6-1A0A0B4J1U7 121 aa9.94□□□□□ -0.82
SYDE1-204ENST00000600440 IGLV9-49A0A0B4J1Y8 123 aa9.94□□□□□ -0.82
SYDE1-204ENST00000600440 HRES1P13985 223 aa9.94□□□□□ -0.82
SYDE1-204ENST00000600440 TENM2Q9NT68 2774 aa9.93□□□□□ -0.82
SYDE1-204ENST00000600440 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
SYDE1-204ENST00000600440 KRTAP11-1Q8IUC1 163 aa9.93□□□□□ -0.82
SYDE1-204ENST00000600440 INAFM1C9JVW0 142 aa9.92□□□□□ -0.82
SYDE1-204ENST00000600440 LINC00313P59037 77 aa9.92□□□□□ -0.82
SYDE1-204ENST00000600440 IGLV8-61A0A075B6I0 122 aa9.91□□□□□ -0.82
SYDE1-204ENST00000600440 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
SYDE1-204ENST00000600440 K7EIL1 84 aa9.86□□□□□ -0.83
SYDE1-204ENST00000600440 KRTAP10-11P60412 298 aa9.86□□□□□ -0.83
SYDE1-204ENST00000600440 C4orf48Q5BLP8 95 aa9.86□□□□□ -0.83
SYDE1-204ENST00000600440 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
SYDE1-204ENST00000600440 CDK2AP2O75956 126 aa9.83□□□□□ -0.84
SYDE1-204ENST00000600440 PLAC8Q9NZF1 115 aa9.81□□□□□ -0.84
SYDE1-204ENST00000600440 TP53AIP1Q9HCN2 124 aa9.81□□□□□ -0.84
SYDE1-204ENST00000600440 ANK2Q01484 3957 aa9.8□□□□□ -0.84
SYDE1-204ENST00000600440 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
SYDE1-204ENST00000600440 A0A087X002 238 aa9.79□□□□□ -0.84
SYDE1-204ENST00000600440 NOTCH2NLQ7Z3S9 236 aa9.79□□□□□ -0.84
SYDE1-204ENST00000600440 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
SYDE1-204ENST00000600440 MDFIQ99750 246 aa9.76□□□□□ -0.85
SYDE1-204ENST00000600440 J3QKU1 62 aa9.75□□□□□ -0.85
SYDE1-204ENST00000600440 RETNLBQ9BQ08 111 aa9.75□□□□□ -0.85
SYDE1-204ENST00000600440 ANAPC11Q9NYG5 84 aa9.74□□□□□ -0.85
SYDE1-204ENST00000600440 Q6ZR54 194 aa9.74□□□□□ -0.85
SYDE1-204ENST00000600440 Q96NJ1 140 aa9.74□□□□□ -0.85
SYDE1-204ENST00000600440 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
SYDE1-204ENST00000600440 STAB2Q8WWQ8 2551 aa9.73□□□□□ -0.85
SYDE1-204ENST00000600440 KRTAP1-5Q9BYS1 174 aa9.73□□□□□ -0.85
SYDE1-204ENST00000600440 KMT2BQ9UMN6 2715 aaPredicted RBP9.73□□□□□ -0.85
SYDE1-204ENST00000600440 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
SYDE1-204ENST00000600440 SPRR1BP22528 89 aa9.71□□□□□ -0.85
SYDE1-204ENST00000600440 H3BS24 57 aa9.71□□□□□ -0.86
SYDE1-204ENST00000600440 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
SYDE1-204ENST00000600440 Q5W150 140 aa9.69□□□□□ -0.86
SYDE1-204ENST00000600440 A0A1B0GU69 56 aa9.68□□□□□ -0.86
SYDE1-204ENST00000600440 LYSTQ99698 3801 aa9.67□□□□□ -0.86
SYDE1-204ENST00000600440 PANO1I0J062 215 aa9.66□□□□□ -0.86
SYDE1-204ENST00000600440 UBE2DNLQ8IWF7 75 aa9.65□□□□□ -0.86
SYDE1-204ENST00000600440 ACYP2P14621 99 aa9.64□□□□□ -0.87
SYDE1-204ENST00000600440 ASB16-AS1Q495Z4 193 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms