RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
HIF3A-218ENST00000600383 SMIM29Q86T20 159 aa9.32□□□□□ -0.92
HIF3A-218ENST00000600383 KRTAP13-1Q8IUC0 172 aa9.32□□□□□ -0.92
HIF3A-218ENST00000600383 PKD1P98161 4303 aa9.32□□□□□ -0.92
HIF3A-218ENST00000600383 LINC00643Q86TS7 51 aa9.31□□□□□ -0.92
HIF3A-218ENST00000600383 SCXQ7RTU7 201 aa9.31□□□□□ -0.92
HIF3A-218ENST00000600383 F8WEM9 126 aa9.3□□□□□ -0.92
HIF3A-218ENST00000600383 DNAH8Q96JB1 4490 aa9.3□□□□□ -0.92
HIF3A-218ENST00000600383 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
HIF3A-218ENST00000600383 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
HIF3A-218ENST00000600383 Q6ZSA8 131 aa9.27□□□□□ -0.93
HIF3A-218ENST00000600383 FAM236AA0A1B0GUQ0 79 aa9.26□□□□□ -0.93
HIF3A-218ENST00000600383 FAM236BA0A1B0GV22 79 aa9.26□□□□□ -0.93
HIF3A-218ENST00000600383 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
HIF3A-218ENST00000600383 IGKV3D-7A0A0C4DH55 119 aa9.26□□□□□ -0.93
HIF3A-218ENST00000600383 ZNF861PO60384 105 aa9.25□□□□□ -0.93
HIF3A-218ENST00000600383 SMIM20Q8N5G0 67 aa9.24□□□□□ -0.93
HIF3A-218ENST00000600383 A0A1W2PNM2 257 aa9.23□□□□□ -0.93
HIF3A-218ENST00000600383 SPRR1BP22528 89 aa9.23□□□□□ -0.93
HIF3A-218ENST00000600383 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
HIF3A-218ENST00000600383 Q6ZVQ6 151 aa9.22□□□□□ -0.93
HIF3A-218ENST00000600383 KMT2CQ8NEZ4 4911 aaKnown RBP9.21□□□□□ -0.93
HIF3A-218ENST00000600383 IGFL1Q6UW32 110 aa9.21□□□□□ -0.94
HIF3A-218ENST00000600383 SPRR4Q96PI1 79 aa9.21□□□□□ -0.94
HIF3A-218ENST00000600383 Q6JHZ5 121 aa9.2□□□□□ -0.94
HIF3A-218ENST00000600383 UQCRQO14949 82 aa9.2□□□□□ -0.94
HIF3A-218ENST00000600383 ANAPC11Q9NYG5 84 aa9.2□□□□□ -0.94
HIF3A-218ENST00000600383 Q8NBF4 154 aa9.19□□□□□ -0.94
HIF3A-218ENST00000600383 IGLV9-49A0A0B4J1Y8 123 aa9.19□□□□□ -0.94
HIF3A-218ENST00000600383 HIST1H4AP62805 103 aaKnown RBP9.18□□□□□ -0.94
HIF3A-218ENST00000600383 ZNF706Q9Y5V0 76 aaPredicted RBP9.18□□□□□ -0.94
HIF3A-218ENST00000600383 PKHD1P08F94 4074 aa9.18□□□□□ -0.94
HIF3A-218ENST00000600383 IGLV8-61A0A075B6I0 122 aa9.17□□□□□ -0.94
HIF3A-218ENST00000600383 NREPQ16612 68 aa9.17□□□□□ -0.94
HIF3A-218ENST00000600383 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
HIF3A-218ENST00000600383 C9orf153Q5TBE3 101 aa9.16□□□□□ -0.94
HIF3A-218ENST00000600383 RYR2Q92736 4967 aa9.15□□□□□ -0.95
HIF3A-218ENST00000600383 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
HIF3A-218ENST00000600383 COX7CP15954 63 aa9.14□□□□□ -0.95
HIF3A-218ENST00000600383 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
HIF3A-218ENST00000600383 ATOX1O00244 68 aa9.13□□□□□ -0.95
HIF3A-218ENST00000600383 CRYGAP11844 174 aa9.13□□□□□ -0.95
HIF3A-218ENST00000600383 A0A087WVE0 104 aa9.13□□□□□ -0.95
HIF3A-218ENST00000600383 ATP5EP2Q5VTU8 51 aa9.13□□□□□ -0.95
HIF3A-218ENST00000600383 A0A1B0GW54 56 aa9.11□□□□□ -0.95
HIF3A-218ENST00000600383 A0A087WSZ3 146 aa9.1□□□□□ -0.95
HIF3A-218ENST00000600383 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
HIF3A-218ENST00000600383 MOBPQ13875 183 aa9.09□□□□□ -0.95
HIF3A-218ENST00000600383 CXCL6P80162 114 aa9.08□□□□□ -0.96
HIF3A-218ENST00000600383 BPY2O14599 106 aa9.07□□□□□ -0.96
HIF3A-218ENST00000600383 HRCT1Q6UXD1 115 aa9.07□□□□□ -0.96
HIF3A-218ENST00000600383 Q8N9L7 120 aa9.05□□□□□ -0.96
HIF3A-218ENST00000600383 DEFB116Q30KQ4 102 aa9.05□□□□□ -0.96
HIF3A-218ENST00000600383 DYNC1H1Q14204 4646 aaKnown RBP9.04□□□□□ -0.96
HIF3A-218ENST00000600383 VPS13BQ7Z7G8 4022 aa9.04□□□□□ -0.96
HIF3A-218ENST00000600383 RPL37AP61513 92 aaKnown RBP9.02□□□□□ -0.96
HIF3A-218ENST00000600383 RPS28P62857 69 aaKnown RBP9.02□□□□□ -0.96
HIF3A-218ENST00000600383 SERP2Q8N6R1 65 aa9.02□□□□□ -0.96
HIF3A-218ENST00000600383 J3KT08 172 aa9.02□□□□□ -0.97
HIF3A-218ENST00000600383 A0A087X002 238 aa8.98□□□□□ -0.97
HIF3A-218ENST00000600383 TMEM258P61165 79 aa8.98□□□□□ -0.97
HIF3A-218ENST00000600383 RYR3Q15413 4870 aa8.98□□□□□ -0.97
HIF3A-218ENST00000600383 CYSTM1Q9H1C7 97 aa8.98□□□□□ -0.97
HIF3A-218ENST00000600383 IGKV4-1P06312 121 aa8.96□□□□□ -0.97
HIF3A-218ENST00000600383 DSCR10P59022 87 aa8.96□□□□□ -0.98
HIF3A-218ENST00000600383 PLA2G1BP04054 148 aaKnown RBP8.95□□□□□ -0.98
HIF3A-218ENST00000600383 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
HIF3A-218ENST00000600383 K7EQZ3 153 aa8.93□□□□□ -0.98
HIF3A-218ENST00000600383 KRTAP13-2Q52LG2 175 aa8.93□□□□□ -0.98
HIF3A-218ENST00000600383 SSBP3-AS1Q7Z2R9 100 aa8.93□□□□□ -0.98
HIF3A-218ENST00000600383 SPINK6Q6UWN8 80 aa8.93□□□□□ -0.98
HIF3A-218ENST00000600383 LINC00472Q9H8W2 130 aa8.92□□□□□ -0.98
HIF3A-218ENST00000600383 APOBP04114 4563 aaKnown RBP8.91□□□□□ -0.98
HIF3A-218ENST00000600383 FAM229BQ4G0N7 80 aa8.91□□□□□ -0.98
HIF3A-218ENST00000600383 FAT1Q14517 4588 aa8.89□□□□□ -0.99
HIF3A-218ENST00000600383 C5orf47Q569G3 176 aa8.87□□□□□ -0.99
HIF3A-218ENST00000600383 Q96NJ1 140 aa8.86□□□□□ -0.99
HIF3A-218ENST00000600383 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
HIF3A-218ENST00000600383 CD164Q04900 197 aa8.85□□□□□ -0.99
HIF3A-218ENST00000600383 TYMSOSQ8TAI1 123 aa8.85□□□□□ -0.99
HIF3A-218ENST00000600383 A8MWP4 228 aa8.84□□□□□ -0.99
HIF3A-218ENST00000600383 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
HIF3A-218ENST00000600383 OXTP01178 125 aa8.83□□□□□ -1
HIF3A-218ENST00000600383 PRR15Q8IV56 129 aa8.82□□□□□ -1
HIF3A-218ENST00000600383 FAM229AH3BQW9 127 aa8.81□□□□□ -1
HIF3A-218ENST00000600383 NDUFB1O75438 58 aa8.81□□□□□ -1
HIF3A-218ENST00000600383 WFDC13Q8IUB5 93 aa8.81□□□□□ -1
HIF3A-218ENST00000600383 HCG22E2RYF7 251 aa8.81□□□□□ -1
HIF3A-218ENST00000600383 C4orf48Q5BLP8 95 aa8.8□□□□□ -1
HIF3A-218ENST00000600383 TRAV7A0A075B6U4 112 aa8.8□□□□□ -1
HIF3A-218ENST00000600383 CDK2AP2O75956 126 aa8.79□□□□□ -1
HIF3A-218ENST00000600383 C20orf197Q8N268 126 aa8.78□□□□□ -1
HIF3A-218ENST00000600383 IGHV6-1A0A0B4J1U7 121 aa8.76□□□□□ -1.01
HIF3A-218ENST00000600383 Q5XG85 94 aa8.76□□□□□ -1.01
HIF3A-218ENST00000600383 KLKP1Q107X0 134 aa8.75□□□□□ -1.01
HIF3A-218ENST00000600383 Q5VSD8 79 aa8.75□□□□□ -1.01
HIF3A-218ENST00000600383 H7BZZ5 65 aa8.75□□□□□ -1.01
HIF3A-218ENST00000600383 FAM236DA0A1B0GTK5 79 aa8.74□□□□□ -1.01
HIF3A-218ENST00000600383 FAM236CP0DP71 79 aa8.74□□□□□ -1.01
HIF3A-218ENST00000600383 CASC2Q6XLA1 102 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms