RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 CFC1BP0CG36 223 aa9.22□□□□□ -0.93
USHBP1-208ENST00000598309 CFC1P0CG37 223 aa9.22□□□□□ -0.93
USHBP1-208ENST00000598309 SEC61BP60468 96 aaKnown RBP9.21□□□□□ -0.94
USHBP1-208ENST00000598309 XP32Q5T750 250 aa9.21□□□□□ -0.94
USHBP1-208ENST00000598309 RAB37Q96AX2 223 aa9.21□□□□□ -0.94
USHBP1-208ENST00000598309 PPDPFLQ8WWR9 84 aa9.2□□□□□ -0.94
USHBP1-208ENST00000598309 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
USHBP1-208ENST00000598309 A0A0G2JQZ4 141 aa9.18□□□□□ -0.94
USHBP1-208ENST00000598309 Q6JHZ5 121 aa9.18□□□□□ -0.94
USHBP1-208ENST00000598309 CEND1Q8N111 149 aa9.18□□□□□ -0.94
USHBP1-208ENST00000598309 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
USHBP1-208ENST00000598309 A6NJY4 79 aa9.16□□□□□ -0.94
USHBP1-208ENST00000598309 H0YGX0 51 aa9.15□□□□□ -0.94
USHBP1-208ENST00000598309 PYY3Q5JQD4 70 aa9.15□□□□□ -0.94
USHBP1-208ENST00000598309 C1orf195Q5TG92 126 aa9.15□□□□□ -0.94
USHBP1-208ENST00000598309 CLEC2BQ92478 149 aa9.15□□□□□ -0.94
USHBP1-208ENST00000598309 SNCGO76070 127 aa9.14□□□□□ -0.95
USHBP1-208ENST00000598309 TCL1BO95988 128 aa9.14□□□□□ -0.95
USHBP1-208ENST00000598309 OCIAD2Q56VL3 154 aa9.14□□□□□ -0.95
USHBP1-208ENST00000598309 IGFL1Q6UW32 110 aa9.12□□□□□ -0.95
USHBP1-208ENST00000598309 SNHG12Q9BXW3 62 aa9.12□□□□□ -0.95
USHBP1-208ENST00000598309 PRO1854Q9UHT4 67 aa9.12□□□□□ -0.95
USHBP1-208ENST00000598309 FXYD2P54710 66 aa9.11□□□□□ -0.95
USHBP1-208ENST00000598309 FAT4Q6V0I7 4981 aa9.11□□□□□ -0.95
USHBP1-208ENST00000598309 TRBV7-7A0A0K0K1E9 115 aa9.1□□□□□ -0.95
USHBP1-208ENST00000598309 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
USHBP1-208ENST00000598309 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
USHBP1-208ENST00000598309 HSD52Q0P140 79 aa9.09□□□□□ -0.95
USHBP1-208ENST00000598309 FAM218AQ96MZ4 157 aa9.09□□□□□ -0.95
USHBP1-208ENST00000598309 A0A1B0GX51 115 aa9.08□□□□□ -0.96
USHBP1-208ENST00000598309 TMA7Q9Y2S6 64 aaKnown RBP9.08□□□□□ -0.96
USHBP1-208ENST00000598309 KRTAP4-1Q9BYQ7 146 aa9.07□□□□□ -0.96
USHBP1-208ENST00000598309 GHRHP01286 108 aa9.06□□□□□ -0.96
USHBP1-208ENST00000598309 H3BUT2 72 aa9.05□□□□□ -0.96
USHBP1-208ENST00000598309 UQCR10Q9UDW1 63 aa9.04□□□□□ -0.96
USHBP1-208ENST00000598309 TRIAP1O43715 76 aa9.03□□□□□ -0.96
USHBP1-208ENST00000598309 NDUFV3P56181 108 aaKnown RBP9.02□□□□□ -0.97
USHBP1-208ENST00000598309 PCOTHQ58A44 107 aa9.01□□□□□ -0.97
USHBP1-208ENST00000598309 Q6Q795 121 aa9.01□□□□□ -0.97
USHBP1-208ENST00000598309 K7ERJ3 54 aa8.99□□□□□ -0.97
USHBP1-208ENST00000598309 TEN1Q86WV5 123 aa8.98□□□□□ -0.97
USHBP1-208ENST00000598309 SS18L2Q9UHA2 77 aa8.98□□□□□ -0.97
USHBP1-208ENST00000598309 FABP2P12104 132 aa8.97□□□□□ -0.97
USHBP1-208ENST00000598309 PSMB2P49721 201 aa8.97□□□□□ -0.97
USHBP1-208ENST00000598309 RPL37P61927 97 aaKnown RBP8.97□□□□□ -0.97
USHBP1-208ENST00000598309 H3BMG7 143 aa8.96□□□□□ -0.98
USHBP1-208ENST00000598309 H3BQ85 93 aa8.96□□□□□ -0.98
USHBP1-208ENST00000598309 LST1O00453 97 aa8.96□□□□□ -0.98
USHBP1-208ENST00000598309 DNAL4O96015 105 aa8.96□□□□□ -0.98
USHBP1-208ENST00000598309 COX6CP09669 75 aa8.96□□□□□ -0.98
USHBP1-208ENST00000598309 ORMDL1Q9P0S3 153 aa8.94□□□□□ -0.98
USHBP1-208ENST00000598309 A0A087WSZ3 146 aa8.9□□□□□ -0.98
USHBP1-208ENST00000598309 TMEM256-PLSCR3K7ERE1 68 aa8.89□□□□□ -0.99
USHBP1-208ENST00000598309 A0A1W2PNM2 257 aa8.87□□□□□ -0.99
USHBP1-208ENST00000598309 TRACP01848 142 aa8.87□□□□□ -0.99
USHBP1-208ENST00000598309 OBSCN-AS1Q96MR7 158 aa8.87□□□□□ -0.99
USHBP1-208ENST00000598309 KRTAP19-2Q3LHN2 52 aa8.86□□□□□ -0.99
USHBP1-208ENST00000598309 Q75L30 129 aa8.86□□□□□ -0.99
USHBP1-208ENST00000598309 ANKRD29Q8N6D5 301 aa8.86□□□□□ -0.99
USHBP1-208ENST00000598309 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
USHBP1-208ENST00000598309 LCE2CQ5TA81 110 aa8.85□□□□□ -0.99
USHBP1-208ENST00000598309 TRBV7-4A0A0J9YYF1 115 aa8.84□□□□□ -0.99
USHBP1-208ENST00000598309 Q96NJ1 140 aa8.84□□□□□ -0.99
USHBP1-208ENST00000598309 SMIM6P0DI80 62 aa8.83□□□□□ -1
USHBP1-208ENST00000598309 SCGB1C2P0DMR2 95 aa8.83□□□□□ -1
USHBP1-208ENST00000598309 M0R143 59 aa8.82□□□□□ -1
USHBP1-208ENST00000598309 A0A1B0GV72 72 aa8.8□□□□□ -1
USHBP1-208ENST00000598309 KRTAP9-2Q9BYQ4 174 aa8.8□□□□□ -1
USHBP1-208ENST00000598309 ATP11AUNQ6ZP68 121 aa8.79□□□□□ -1
USHBP1-208ENST00000598309 CCKP06307 115 aa8.78□□□□□ -1
USHBP1-208ENST00000598309 C20orf166-AS1Q96NR2 134 aa8.77□□□□□ -1.01
USHBP1-208ENST00000598309 SIGMAR1Q99720 223 aa8.77□□□□□ -1.01
USHBP1-208ENST00000598309 MT1HP80294 61 aa8.75□□□□□ -1.01
USHBP1-208ENST00000598309 A8MUU9 505 aa8.74□□□□□ -1.01
USHBP1-208ENST00000598309 RBM3P98179 157 aaKnown RBP8.74□□□□□ -1.01
USHBP1-208ENST00000598309 IGKV4-1P06312 121 aa8.73□□□□□ -1.01
USHBP1-208ENST00000598309 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
USHBP1-208ENST00000598309 LINC00472Q9H8W2 130 aa8.73□□□□□ -1.01
USHBP1-208ENST00000598309 ATXN8Q156A1 80 aa8.72□□□□□ -1.01
USHBP1-208ENST00000598309 DSCR8Q96T75 97 aa8.72□□□□□ -1.01
USHBP1-208ENST00000598309 DSCR10P59022 87 aa8.71□□□□□ -1.02
USHBP1-208ENST00000598309 TSTD3H0UI37 97 aa8.69□□□□□ -1.02
USHBP1-208ENST00000598309 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
USHBP1-208ENST00000598309 COX6B2Q6YFQ2 88 aa8.69□□□□□ -1.02
USHBP1-208ENST00000598309 LINC00313P59037 77 aa8.68□□□□□ -1.02
USHBP1-208ENST00000598309 NAA38Q9BRA0 125 aaKnown RBP8.68□□□□□ -1.02
USHBP1-208ENST00000598309 VPS25Q9BRG1 176 aa8.68□□□□□ -1.02
USHBP1-208ENST00000598309 C9JAW5 83 aa8.67□□□□□ -1.02
USHBP1-208ENST00000598309 LYRM7Q5U5X0 104 aa8.67□□□□□ -1.02
USHBP1-208ENST00000598309 KRTAP16-1A8MUX0 517 aa8.65□□□□□ -1.02
USHBP1-208ENST00000598309 DEFB116Q30KQ4 102 aa8.65□□□□□ -1.02
USHBP1-208ENST00000598309 JMJD7-PLA2G4BH0Y9G9 81 aa8.64□□□□□ -1.03
USHBP1-208ENST00000598309 TRBV20-1A0A075B6N2 111 aa8.61□□□□□ -1.03
USHBP1-208ENST00000598309 LOC110117498A0A087WWA1 95 aa8.61□□□□□ -1.03
USHBP1-208ENST00000598309 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
USHBP1-208ENST00000598309 LOC105371267A0A1B0GV96 52 aa8.61□□□□□ -1.03
USHBP1-208ENST00000598309 A0A1B0GW54 56 aa8.61□□□□□ -1.03
USHBP1-208ENST00000598309 J3KT08 172 aa8.61□□□□□ -1.03
USHBP1-208ENST00000598309 Q6ZQT0 140 aa8.61□□□□□ -1.03
USHBP1-208ENST00000598309 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms