RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 hADV29S1A0JD25 119 aa9.36□□□□□ -0.91
SHKBP1-215ENST00000597649 TRIAP1O43715 76 aa9.36□□□□□ -0.91
SHKBP1-215ENST00000597649 SCGB1C2P0DMR2 95 aa9.35□□□□□ -0.91
SHKBP1-215ENST00000597649 ST20-AS1Q8NBB2 130 aa9.35□□□□□ -0.91
SHKBP1-215ENST00000597649 DEFB105AQ8NG35 78 aa9.34□□□□□ -0.91
SHKBP1-215ENST00000597649 CRCT1Q9UGL9 99 aa9.34□□□□□ -0.91
SHKBP1-215ENST00000597649 KRTAP13-3Q3SY46 172 aa9.31□□□□□ -0.92
SHKBP1-215ENST00000597649 ASB16-AS1Q495Z4 193 aa9.31□□□□□ -0.92
SHKBP1-215ENST00000597649 LINC00483Q53H64 154 aa9.31□□□□□ -0.92
SHKBP1-215ENST00000597649 TEX49A0A1B0GTD5 131 aa9.3□□□□□ -0.92
SHKBP1-215ENST00000597649 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
SHKBP1-215ENST00000597649 A0A1B0GX51 115 aa9.29□□□□□ -0.92
SHKBP1-215ENST00000597649 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.29□□□□□ -0.92
SHKBP1-215ENST00000597649 Q6ZQY7 126 aa9.29□□□□□ -0.92
SHKBP1-215ENST00000597649 CLEC2BQ92478 149 aa9.29□□□□□ -0.92
SHKBP1-215ENST00000597649 FAM218AQ96MZ4 157 aa9.29□□□□□ -0.92
SHKBP1-215ENST00000597649 FP248Q71RG6 208 aaPredicted RBP9.28□□□□□ -0.92
SHKBP1-215ENST00000597649 NAA38Q9BRA0 125 aaKnown RBP9.28□□□□□ -0.92
SHKBP1-215ENST00000597649 SNHG12Q9BXW3 62 aa9.28□□□□□ -0.92
SHKBP1-215ENST00000597649 LAMTOR3Q9UHA4 124 aa9.28□□□□□ -0.92
SHKBP1-215ENST00000597649 SPRR1BP22528 89 aa9.27□□□□□ -0.93
SHKBP1-215ENST00000597649 SPAG11AQ6PDA7 123 aa9.27□□□□□ -0.93
SHKBP1-215ENST00000597649 IGLV5-48A0A075B6I7 105 aa9.26□□□□□ -0.93
SHKBP1-215ENST00000597649 IGLV9-49A0A0B4J1Y8 123 aa9.26□□□□□ -0.93
SHKBP1-215ENST00000597649 DNAL4O96015 105 aa9.26□□□□□ -0.93
SHKBP1-215ENST00000597649 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
SHKBP1-215ENST00000597649 LYRM7Q5U5X0 104 aa9.25□□□□□ -0.93
SHKBP1-215ENST00000597649 H3BUT2 72 aa9.24□□□□□ -0.93
SHKBP1-215ENST00000597649 GHRHP01286 108 aa9.24□□□□□ -0.93
SHKBP1-215ENST00000597649 COL5A1-AS1Q5SY13 56 aa9.24□□□□□ -0.93
SHKBP1-215ENST00000597649 C9orf153Q5TBE3 101 aa9.24□□□□□ -0.93
SHKBP1-215ENST00000597649 C9orf118A6NHY6 69 aa9.23□□□□□ -0.93
SHKBP1-215ENST00000597649 TAX1BP3O14907 124 aa9.23□□□□□ -0.93
SHKBP1-215ENST00000597649 Q8N377 158 aa9.23□□□□□ -0.93
SHKBP1-215ENST00000597649 MOBPQ13875 183 aa9.22□□□□□ -0.93
SHKBP1-215ENST00000597649 PPDPFLQ8WWR9 84 aa9.22□□□□□ -0.93
SHKBP1-215ENST00000597649 F8WEM9 126 aa9.21□□□□□ -0.94
SHKBP1-215ENST00000597649 LCE2CQ5TA81 110 aa9.21□□□□□ -0.94
SHKBP1-215ENST00000597649 Q8NBF4 154 aa9.21□□□□□ -0.94
SHKBP1-215ENST00000597649 LST1O00453 97 aa9.2□□□□□ -0.94
SHKBP1-215ENST00000597649 TRACP01848 142 aa9.2□□□□□ -0.94
SHKBP1-215ENST00000597649 ATXN8Q156A1 80 aa9.2□□□□□ -0.94
SHKBP1-215ENST00000597649 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
SHKBP1-215ENST00000597649 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
SHKBP1-215ENST00000597649 SSBP3-AS1Q7Z2R9 100 aa9.19□□□□□ -0.94
SHKBP1-215ENST00000597649 ORMDL1Q9P0S3 153 aa9.19□□□□□ -0.94
SHKBP1-215ENST00000597649 H3BQ85 93 aa9.18□□□□□ -0.94
SHKBP1-215ENST00000597649 FABP2P12104 132 aa9.18□□□□□ -0.94
SHKBP1-215ENST00000597649 SMIM29Q86T20 159 aa9.18□□□□□ -0.94
SHKBP1-215ENST00000597649 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
SHKBP1-215ENST00000597649 TCL1BO95988 128 aa9.17□□□□□ -0.94
SHKBP1-215ENST00000597649 A0A1W2PPM0 123 aa9.16□□□□□ -0.94
SHKBP1-215ENST00000597649 TMEM256-PLSCR3K7ERE1 68 aa9.14□□□□□ -0.95
SHKBP1-215ENST00000597649 SPINK1P00995 79 aa9.14□□□□□ -0.95
SHKBP1-215ENST00000597649 KRTAP19-2Q3LHN2 52 aa9.14□□□□□ -0.95
SHKBP1-215ENST00000597649 NDUFV3P56181 108 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-215ENST00000597649 XP32Q5T750 250 aa9.11□□□□□ -0.95
SHKBP1-215ENST00000597649 BAALC-AS2P0C853 105 aa9.1□□□□□ -0.95
SHKBP1-215ENST00000597649 SPCS1Q9Y6A9 102 aa9.1□□□□□ -0.95
SHKBP1-215ENST00000597649 Q6JHZ5 121 aa9.09□□□□□ -0.95
SHKBP1-215ENST00000597649 H3BMG7 143 aa9.08□□□□□ -0.96
SHKBP1-215ENST00000597649 MT1HP80294 61 aa9.08□□□□□ -0.96
SHKBP1-215ENST00000597649 IGLV8-61A0A075B6I0 122 aa9.07□□□□□ -0.96
SHKBP1-215ENST00000597649 C9JAW5 83 aa9.07□□□□□ -0.96
SHKBP1-215ENST00000597649 UBE2V1Q13404 147 aa9.07□□□□□ -0.96
SHKBP1-215ENST00000597649 HRCT1Q6UXD1 115 aa9.07□□□□□ -0.96
SHKBP1-215ENST00000597649 ANKRD29Q8N6D5 301 aa9.05□□□□□ -0.96
SHKBP1-215ENST00000597649 A0A0G2JQZ4 141 aa9.04□□□□□ -0.96
SHKBP1-215ENST00000597649 A0A1B0GV72 72 aa9.04□□□□□ -0.96
SHKBP1-215ENST00000597649 IGFL1Q6UW32 110 aa9.04□□□□□ -0.96
SHKBP1-215ENST00000597649 RPS29P62273 56 aaKnown RBP9.03□□□□□ -0.96
SHKBP1-215ENST00000597649 CD164Q04900 197 aa9.03□□□□□ -0.96
SHKBP1-215ENST00000597649 K7EP34 96 aa9.01□□□□□ -0.97
SHKBP1-215ENST00000597649 GTF2H5Q6ZYL4 71 aa9.01□□□□□ -0.97
SHKBP1-215ENST00000597649 RBM3P98179 157 aaKnown RBP9□□□□□ -0.97
SHKBP1-215ENST00000597649 LIMD2Q9BT23 127 aa9□□□□□ -0.97
SHKBP1-215ENST00000597649 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
SHKBP1-215ENST00000597649 H3BT86 120 aa8.99□□□□□ -0.97
SHKBP1-215ENST00000597649 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
SHKBP1-215ENST00000597649 MTURNQ8N3F0 131 aa8.99□□□□□ -0.97
SHKBP1-215ENST00000597649 JMJD7-PLA2G4BH0Y9G9 81 aa8.98□□□□□ -0.97
SHKBP1-215ENST00000597649 DSCR8Q96T75 97 aa8.98□□□□□ -0.97
SHKBP1-215ENST00000597649 KRTAP10-6P60371 365 aaPredicted RBP8.97□□□□□ -0.97
SHKBP1-215ENST00000597649 PCOTHQ58A44 107 aa8.96□□□□□ -0.98
SHKBP1-215ENST00000597649 A0A1B0GV90 55 aa8.95□□□□□ -0.98
SHKBP1-215ENST00000597649 TEN1Q86WV5 123 aa8.95□□□□□ -0.98
SHKBP1-215ENST00000597649 TRBV7-7A0A0K0K1E9 115 aa8.94□□□□□ -0.98
SHKBP1-215ENST00000597649 CCKP06307 115 aa8.92□□□□□ -0.98
SHKBP1-215ENST00000597649 Q6Q795 121 aa8.92□□□□□ -0.98
SHKBP1-215ENST00000597649 VPS25Q9BRG1 176 aa8.92□□□□□ -0.98
SHKBP1-215ENST00000597649 TRBV7-4A0A0J9YYF1 115 aa8.91□□□□□ -0.98
SHKBP1-215ENST00000597649 A0A1W2PNM2 257 aa8.9□□□□□ -0.98
SHKBP1-215ENST00000597649 Q5XG85 94 aa8.9□□□□□ -0.98
SHKBP1-215ENST00000597649 PDE6GP18545 87 aa8.89□□□□□ -0.99
SHKBP1-215ENST00000597649 C14orf132Q9NPU4 83 aa8.88□□□□□ -0.99
SHKBP1-215ENST00000597649 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
SHKBP1-215ENST00000597649 A0A087WSZ3 146 aa8.87□□□□□ -0.99
SHKBP1-215ENST00000597649 C9orf92A6NGG3 77 aa8.87□□□□□ -0.99
SHKBP1-215ENST00000597649 F8W1H4 67 aa8.87□□□□□ -0.99
SHKBP1-215ENST00000597649 SMCPP49901 116 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms