RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 Q6ZQY7 126 aa5.29□□□□□ -1.56
SNRPA-202ENST00000596860 H3BT86 120 aa5.28□□□□□ -1.56
SNRPA-202ENST00000596860 LINC01547P58512 204 aaPredicted RBP5.28□□□□□ -1.56
SNRPA-202ENST00000596860 UBE2V1Q13404 147 aa5.28□□□□□ -1.56
SNRPA-202ENST00000596860 Q8N377 158 aa5.27□□□□□ -1.57
SNRPA-202ENST00000596860 SRRM2Q9UQ35 2752 aaKnown RBP5.27□□□□□ -1.57
SNRPA-202ENST00000596860 H3BMG7 143 aa5.26□□□□□ -1.57
SNRPA-202ENST00000596860 KRTAP1-4P0C5Y4 121 aa5.26□□□□□ -1.57
SNRPA-202ENST00000596860 LAMTOR3Q9UHA4 124 aa5.26□□□□□ -1.57
SNRPA-202ENST00000596860 C21orf62-AS1Q17RA5 79 aa5.25□□□□□ -1.57
SNRPA-202ENST00000596860 GAGE2AQ6NT46 116 aa5.25□□□□□ -1.57
SNRPA-202ENST00000596860 ST20-AS1Q8NBB2 130 aa5.25□□□□□ -1.57
SNRPA-202ENST00000596860 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
SNRPA-202ENST00000596860 C9JAW5 83 aa5.24□□□□□ -1.57
SNRPA-202ENST00000596860 F8W1H4 67 aa5.24□□□□□ -1.57
SNRPA-202ENST00000596860 BAALC-AS2P0C853 105 aa5.24□□□□□ -1.57
SNRPA-202ENST00000596860 SMIM29Q86T20 159 aa5.24□□□□□ -1.57
SNRPA-202ENST00000596860 DMBT1Q9UGM3 2413 aaPredicted RBP5.23□□□□□ -1.57
SNRPA-202ENST00000596860 JMJD7-PLA2G4BH0Y9G9 81 aa5.23□□□□□ -1.57
SNRPA-202ENST00000596860 CRYGAP11844 174 aa5.23□□□□□ -1.57
SNRPA-202ENST00000596860 LORP23490 312 aaPredicted RBP5.23□□□□□ -1.57
SNRPA-202ENST00000596860 ANKRD29Q8N6D5 301 aa5.23□□□□□ -1.57
SNRPA-202ENST00000596860 PRO0461Q9UI25 63 aa5.23□□□□□ -1.57
SNRPA-202ENST00000596860 F8WEM9 126 aa5.22□□□□□ -1.57
SNRPA-202ENST00000596860 SSBP3-AS1Q7Z2R9 100 aa5.22□□□□□ -1.57
SNRPA-202ENST00000596860 A0A1B0GV90 55 aa5.21□□□□□ -1.58
SNRPA-202ENST00000596860 OXTP01178 125 aa5.21□□□□□ -1.58
SNRPA-202ENST00000596860 NDUFV3P56181 108 aaKnown RBP5.21□□□□□ -1.58
SNRPA-202ENST00000596860 Q6JHZ5 121 aa5.21□□□□□ -1.58
SNRPA-202ENST00000596860 Q8NBF4 154 aa5.21□□□□□ -1.58
SNRPA-202ENST00000596860 DEFB105AQ8NG35 78 aa5.21□□□□□ -1.58
SNRPA-202ENST00000596860 OBSCN-AS1Q96MR7 158 aa5.21□□□□□ -1.58
SNRPA-202ENST00000596860 ABCA13Q86UQ4 5058 aa5.21□□□□□ -1.58
SNRPA-202ENST00000596860 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
SNRPA-202ENST00000596860 PDE6GP18545 87 aa5.2□□□□□ -1.58
SNRPA-202ENST00000596860 A0A087X002 238 aa5.18□□□□□ -1.58
SNRPA-202ENST00000596860 A0A1B0GW54 56 aa5.18□□□□□ -1.58
SNRPA-202ENST00000596860 RBM3P98179 157 aaKnown RBP5.18□□□□□ -1.58
SNRPA-202ENST00000596860 CD164Q04900 197 aa5.18□□□□□ -1.58
SNRPA-202ENST00000596860 FLG2Q5D862 2391 aaPredicted RBP5.18□□□□□ -1.58
SNRPA-202ENST00000596860 TRBV7-4A0A0J9YYF1 115 aa5.17□□□□□ -1.58
SNRPA-202ENST00000596860 KRTAP29-1A8MX34 341 aaPredicted RBP5.17□□□□□ -1.58
SNRPA-202ENST00000596860 KRTAP13-2Q52LG2 175 aa5.17□□□□□ -1.58
SNRPA-202ENST00000596860 Q6Q795 121 aa5.17□□□□□ -1.58
SNRPA-202ENST00000596860 TEN1Q86WV5 123 aa5.17□□□□□ -1.58
SNRPA-202ENST00000596860 LOC110117498A0A087WWA1 95 aa5.16□□□□□ -1.58
SNRPA-202ENST00000596860 KRTAP10-8P60410 259 aa5.16□□□□□ -1.58
SNRPA-202ENST00000596860 RPS29P62273 56 aaKnown RBP5.16□□□□□ -1.58
SNRPA-202ENST00000596860 SPAG11AQ6PDA7 123 aa5.16□□□□□ -1.58
SNRPA-202ENST00000596860 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
SNRPA-202ENST00000596860 TYMSOSQ8TAI1 123 aa5.16□□□□□ -1.58
SNRPA-202ENST00000596860 TNXBP22105 4242 aa5.15□□□□□ -1.58
SNRPA-202ENST00000596860 MOBPQ13875 183 aa5.15□□□□□ -1.59
SNRPA-202ENST00000596860 C9orf153Q5TBE3 101 aa5.15□□□□□ -1.59
SNRPA-202ENST00000596860 DSCR8Q96T75 97 aa5.15□□□□□ -1.59
SNRPA-202ENST00000596860 ANAPC11Q9NYG5 84 aa5.15□□□□□ -1.59
SNRPA-202ENST00000596860 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.59
SNRPA-202ENST00000596860 IGLV9-49A0A0B4J1Y8 123 aa5.14□□□□□ -1.59
SNRPA-202ENST00000596860 IGFL1Q6UW32 110 aa5.14□□□□□ -1.59
SNRPA-202ENST00000596860 MTURNQ8N3F0 131 aa5.14□□□□□ -1.59
SNRPA-202ENST00000596860 PRR26Q8N8Z3 221 aa5.14□□□□□ -1.59
SNRPA-202ENST00000596860 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
SNRPA-202ENST00000596860 SPINK1P00995 79 aa5.13□□□□□ -1.59
SNRPA-202ENST00000596860 Q5XG85 94 aa5.13□□□□□ -1.59
SNRPA-202ENST00000596860 ETDBQ3ZM63 59 aa5.12□□□□□ -1.59
SNRPA-202ENST00000596860 Q6ZQT0 140 aa5.12□□□□□ -1.59
SNRPA-202ENST00000596860 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
SNRPA-202ENST00000596860 LINC00304Q8N9R0 145 aa5.11□□□□□ -1.59
SNRPA-202ENST00000596860 CCKP06307 115 aa5.1□□□□□ -1.59
SNRPA-202ENST00000596860 ASB16-AS1Q495Z4 193 aa5.1□□□□□ -1.59
SNRPA-202ENST00000596860 TRBV7-7A0A0K0K1E9 115 aa5.09□□□□□ -1.59
SNRPA-202ENST00000596860 A0A1W2PNM2 257 aa5.09□□□□□ -1.59
SNRPA-202ENST00000596860 LIMD2Q9BT23 127 aa5.09□□□□□ -1.59
SNRPA-202ENST00000596860 C14orf132Q9NPU4 83 aa5.09□□□□□ -1.59
SNRPA-202ENST00000596860 SS18L2Q9UHA2 77 aa5.09□□□□□ -1.59
SNRPA-202ENST00000596860 FAM240AA0A1B0GVK7 77 aa5.07□□□□□ -1.6
SNRPA-202ENST00000596860 ACYP1P07311 99 aa5.07□□□□□ -1.6
SNRPA-202ENST00000596860 J3QR89 54 aa5.06□□□□□ -1.6
SNRPA-202ENST00000596860 A0A1B0GV72 72 aa5.05□□□□□ -1.6
SNRPA-202ENST00000596860 HERC1Q15751 4861 aa5.04□□□□□ -1.6
SNRPA-202ENST00000596860 A0A087WSZ3 146 aa5.03□□□□□ -1.6
SNRPA-202ENST00000596860 VPS25Q9BRG1 176 aa5.03□□□□□ -1.6
SNRPA-202ENST00000596860 UBR4Q5T4S7 5183 aa5.02□□□□□ -1.61
SNRPA-202ENST00000596860 A0A0G2JQZ4 141 aa5.02□□□□□ -1.61
SNRPA-202ENST00000596860 J3KT08 172 aa5□□□□□ -1.61
SNRPA-202ENST00000596860 K7ERU9 68 aa5□□□□□ -1.61
SNRPA-202ENST00000596860 HRCT1Q6UXD1 115 aa5□□□□□ -1.61
SNRPA-202ENST00000596860 FP248Q71RG6 208 aaPredicted RBP5□□□□□ -1.61
SNRPA-202ENST00000596860 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
SNRPA-202ENST00000596860 NREPQ16612 68 aa4.99□□□□□ -1.61
SNRPA-202ENST00000596860 UBL5Q9BZL1 73 aa4.99□□□□□ -1.61
SNRPA-202ENST00000596860 LINC00846Q9NV44 126 aa4.98□□□□□ -1.61
SNRPA-202ENST00000596860 C1orf195Q5TG92 126 aa4.97□□□□□ -1.61
SNRPA-202ENST00000596860 Q96NJ1 140 aa4.97□□□□□ -1.61
SNRPA-202ENST00000596860 Q6ZVQ6 151 aa4.96□□□□□ -1.62
SNRPA-202ENST00000596860 CXCL6P80162 114 aa4.95□□□□□ -1.62
SNRPA-202ENST00000596860 ATP5EP2Q5VTU8 51 aa4.95□□□□□ -1.62
SNRPA-202ENST00000596860 SIGMAR1Q99720 223 aa4.94□□□□□ -1.62
SNRPA-202ENST00000596860 BPY2O14599 106 aa4.93□□□□□ -1.62
SNRPA-202ENST00000596860 LINC00643Q86TS7 51 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms