RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 Q6JHZ5 121 aa5.5□□□□□ -1.53
PNKP-208ENST00000596624 TRBV7-7A0A0K0K1E9 115 aa5.49□□□□□ -1.53
PNKP-208ENST00000596624 LINC00575Q6W349 94 aa5.49□□□□□ -1.53
PNKP-208ENST00000596624 PCP2Q8IVA1 136 aa5.48□□□□□ -1.53
PNKP-208ENST00000596624 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
PNKP-208ENST00000596624 IGFL1Q6UW32 110 aa5.47□□□□□ -1.53
PNKP-208ENST00000596624 CLEC2BQ92478 149 aa5.47□□□□□ -1.53
PNKP-208ENST00000596624 KRTDAPP60985 99 aa5.46□□□□□ -1.54
PNKP-208ENST00000596624 OCIAD2Q56VL3 154 aa5.46□□□□□ -1.54
PNKP-208ENST00000596624 C20orf202A1L168 122 aa5.45□□□□□ -1.54
PNKP-208ENST00000596624 F8WEM9 126 aa5.45□□□□□ -1.54
PNKP-208ENST00000596624 SNRPEP62304 92 aaKnown RBP5.45□□□□□ -1.54
PNKP-208ENST00000596624 ATP11AUNQ6ZP68 121 aa5.45□□□□□ -1.54
PNKP-208ENST00000596624 Q6ZQY7 126 aa5.45□□□□□ -1.54
PNKP-208ENST00000596624 PPDPFLQ8WWR9 84 aa5.45□□□□□ -1.54
PNKP-208ENST00000596624 hADV29S1A0JD25 119 aa5.44□□□□□ -1.54
PNKP-208ENST00000596624 CFC1P0CG37 223 aa5.44□□□□□ -1.54
PNKP-208ENST00000596624 VAMP3Q15836 100 aa5.44□□□□□ -1.54
PNKP-208ENST00000596624 OBSCN-AS1Q96MR7 158 aa5.44□□□□□ -1.54
PNKP-208ENST00000596624 C20orf166-AS1Q96NR2 134 aa5.44□□□□□ -1.54
PNKP-208ENST00000596624 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
PNKP-208ENST00000596624 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.43□□□□□ -1.54
PNKP-208ENST00000596624 A8MUU9 505 aa5.42□□□□□ -1.54
PNKP-208ENST00000596624 Q6Q795 121 aa5.42□□□□□ -1.54
PNKP-208ENST00000596624 ATOH7Q8N100 152 aa5.42□□□□□ -1.54
PNKP-208ENST00000596624 SSPOA2VEC9 5147 aa5.42□□□□□ -1.54
PNKP-208ENST00000596624 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
PNKP-208ENST00000596624 SMIM6P0DI80 62 aa5.4□□□□□ -1.54
PNKP-208ENST00000596624 USH2AO75445 5202 aa5.4□□□□□ -1.55
PNKP-208ENST00000596624 LST1O00453 97 aa5.39□□□□□ -1.55
PNKP-208ENST00000596624 SCGB1D1O95968 90 aa5.39□□□□□ -1.55
PNKP-208ENST00000596624 S100A6P06703 90 aa5.37□□□□□ -1.55
PNKP-208ENST00000596624 BVES-AS1Q5T3Y7 98 aa5.37□□□□□ -1.55
PNKP-208ENST00000596624 Q96NJ1 140 aa5.37□□□□□ -1.55
PNKP-208ENST00000596624 SS18L2Q9UHA2 77 aa5.36□□□□□ -1.55
PNKP-208ENST00000596624 H3BUT2 72 aa5.35□□□□□ -1.55
PNKP-208ENST00000596624 TEN1Q86WV5 123 aa5.35□□□□□ -1.55
PNKP-208ENST00000596624 C12orf57Q99622 126 aa5.35□□□□□ -1.55
PNKP-208ENST00000596624 SNHG12Q9BXW3 62 aa5.35□□□□□ -1.55
PNKP-208ENST00000596624 MT2AP02795 61 aa5.34□□□□□ -1.55
PNKP-208ENST00000596624 MPLKIPQ8TAP9 179 aa5.34□□□□□ -1.55
PNKP-208ENST00000596624 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.55
PNKP-208ENST00000596624 TRBV20-1A0A075B6N2 111 aa5.32□□□□□ -1.56
PNKP-208ENST00000596624 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
PNKP-208ENST00000596624 HIST3H2BBQ8N257 126 aa5.32□□□□□ -1.56
PNKP-208ENST00000596624 HIST1H2BLQ99880 126 aa5.32□□□□□ -1.56
PNKP-208ENST00000596624 LCE2BO14633 110 aa5.31□□□□□ -1.56
PNKP-208ENST00000596624 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
PNKP-208ENST00000596624 HSBP1L1C9JCN9 74 aa5.3□□□□□ -1.56
PNKP-208ENST00000596624 NDUFV3P56181 108 aaKnown RBP5.3□□□□□ -1.56
PNKP-208ENST00000596624 A0A087WSZ3 146 aa5.29□□□□□ -1.56
PNKP-208ENST00000596624 H0YGX0 51 aa5.29□□□□□ -1.56
PNKP-208ENST00000596624 DLEU1O43261 78 aa5.29□□□□□ -1.56
PNKP-208ENST00000596624 MT1FP04733 61 aa5.29□□□□□ -1.56
PNKP-208ENST00000596624 A0A1B0GX51 115 aa5.28□□□□□ -1.56
PNKP-208ENST00000596624 COX8AP10176 69 aa5.28□□□□□ -1.56
PNKP-208ENST00000596624 HRES1P13985 223 aa5.28□□□□□ -1.56
PNKP-208ENST00000596624 FAM218AQ96MZ4 157 aa5.28□□□□□ -1.56
PNKP-208ENST00000596624 HIST1H4GQ99525 98 aa5.28□□□□□ -1.56
PNKP-208ENST00000596624 PCP4L1A6NKN8 68 aa5.27□□□□□ -1.57
PNKP-208ENST00000596624 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
PNKP-208ENST00000596624 A0A0B4J2C4 111 aa5.26□□□□□ -1.57
PNKP-208ENST00000596624 A0A1W2PNM2 257 aa5.26□□□□□ -1.57
PNKP-208ENST00000596624 S100A2P29034 98 aa5.26□□□□□ -1.57
PNKP-208ENST00000596624 DSCR10P59022 87 aa5.26□□□□□ -1.57
PNKP-208ENST00000596624 H3BMG7 143 aa5.25□□□□□ -1.57
PNKP-208ENST00000596624 SNCGO76070 127 aa5.25□□□□□ -1.57
PNKP-208ENST00000596624 GHRHP01286 108 aa5.25□□□□□ -1.57
PNKP-208ENST00000596624 LINC00313P59037 77 aa5.25□□□□□ -1.57
PNKP-208ENST00000596624 NOTCH2NLQ7Z3S9 236 aa5.25□□□□□ -1.57
PNKP-208ENST00000596624 MACF1Q9UPN3 7388 aaKnown RBP5.24□□□□□ -1.57
PNKP-208ENST00000596624 HIGD1BQ9P298 99 aa5.24□□□□□ -1.57
PNKP-208ENST00000596624 TRBV7-4A0A0J9YYF1 115 aa5.23□□□□□ -1.57
PNKP-208ENST00000596624 TSTD3H0UI37 97 aa5.23□□□□□ -1.57
PNKP-208ENST00000596624 LINC00472Q9H8W2 130 aa5.22□□□□□ -1.57
PNKP-208ENST00000596624 RBM12B-AS1Q9P1G2 102 aa5.22□□□□□ -1.57
PNKP-208ENST00000596624 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
PNKP-208ENST00000596624 IGKV4-1P06312 121 aa5.2□□□□□ -1.58
PNKP-208ENST00000596624 KRTAP10-10P60014 251 aa5.2□□□□□ -1.58
PNKP-208ENST00000596624 SIGMAR1Q99720 223 aa5.2□□□□□ -1.58
PNKP-208ENST00000596624 FAM236DA0A1B0GTK5 79 aa5.19□□□□□ -1.58
PNKP-208ENST00000596624 FAM236CP0DP71 79 aa5.19□□□□□ -1.58
PNKP-208ENST00000596624 C2orf91Q6ZV80 131 aa5.19□□□□□ -1.58
PNKP-208ENST00000596624 H3BQ85 93 aa5.18□□□□□ -1.58
PNKP-208ENST00000596624 FABP2P12104 132 aa5.18□□□□□ -1.58
PNKP-208ENST00000596624 KRTAP19-6Q3LI70 58 aa5.18□□□□□ -1.58
PNKP-208ENST00000596624 PRO1854Q9UHT4 67 aa5.18□□□□□ -1.58
PNKP-208ENST00000596624 ANKRD29Q8N6D5 301 aa5.17□□□□□ -1.58
PNKP-208ENST00000596624 C14orf144Q96I85 54 aa5.17□□□□□ -1.58
PNKP-208ENST00000596624 TRIAP1O43715 76 aa5.16□□□□□ -1.58
PNKP-208ENST00000596624 CEND1Q8N111 149 aa5.16□□□□□ -1.58
PNKP-208ENST00000596624 SYNE2Q8WXH0 6885 aaKnown RBP5.16□□□□□ -1.58
PNKP-208ENST00000596624 PYY3Q5JQD4 70 aa5.15□□□□□ -1.59
PNKP-208ENST00000596624 C8orf87E5RJ46 101 aa5.14□□□□□ -1.59
PNKP-208ENST00000596624 TMEM256-PLSCR3K7ERE1 68 aa5.14□□□□□ -1.59
PNKP-208ENST00000596624 TMEM238LA0A1B0GVL6 79 aa5.13□□□□□ -1.59
PNKP-208ENST00000596624 A6NJY4 79 aa5.13□□□□□ -1.59
PNKP-208ENST00000596624 FXYD2P54710 66 aa5.13□□□□□ -1.59
PNKP-208ENST00000596624 ORMDL1Q9P0S3 153 aa5.13□□□□□ -1.59
PNKP-208ENST00000596624 IGHV6-1A0A0B4J1U7 121 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms