RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 HRCT1Q6UXD1 115 aa8.43□□□□□ -1.06
TRIM28-205ENST00000595028 CD164Q04900 197 aa8.42□□□□□ -1.06
TRIM28-205ENST00000595028 LINC00575Q6W349 94 aa8.42□□□□□ -1.06
TRIM28-205ENST00000595028 C2orf91Q6ZV80 131 aa8.42□□□□□ -1.06
TRIM28-205ENST00000595028 H7C2G1 150 aa8.38□□□□□ -1.07
TRIM28-205ENST00000595028 Q6ZQY7 126 aa8.38□□□□□ -1.07
TRIM28-205ENST00000595028 hADV29S1A0JD25 119 aa8.37□□□□□ -1.07
TRIM28-205ENST00000595028 HSD52Q0P140 79 aa8.37□□□□□ -1.07
TRIM28-205ENST00000595028 ASB16-AS1Q495Z4 193 aa8.36□□□□□ -1.07
TRIM28-205ENST00000595028 BVES-AS1Q5T3Y7 98 aa8.36□□□□□ -1.07
TRIM28-205ENST00000595028 A0A0G2JQZ4 141 aa8.35□□□□□ -1.07
TRIM28-205ENST00000595028 F8WEM9 126 aa8.35□□□□□ -1.07
TRIM28-205ENST00000595028 CFC1BP0CG36 223 aa8.35□□□□□ -1.07
TRIM28-205ENST00000595028 CFC1P0CG37 223 aa8.35□□□□□ -1.07
TRIM28-205ENST00000595028 Q5XG85 94 aa8.35□□□□□ -1.07
TRIM28-205ENST00000595028 CEND1Q8N111 149 aa8.35□□□□□ -1.07
TRIM28-205ENST00000595028 A0A0B4J2C4 111 aa8.34□□□□□ -1.07
TRIM28-205ENST00000595028 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
TRIM28-205ENST00000595028 A6NJY4 79 aa8.34□□□□□ -1.07
TRIM28-205ENST00000595028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.34□□□□□ -1.07
TRIM28-205ENST00000595028 RAB37Q96AX2 223 aa8.34□□□□□ -1.07
TRIM28-205ENST00000595028 XP32Q5T750 250 aa8.33□□□□□ -1.08
TRIM28-205ENST00000595028 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
TRIM28-205ENST00000595028 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
TRIM28-205ENST00000595028 PPDPFLQ8WWR9 84 aa8.3□□□□□ -1.08
TRIM28-205ENST00000595028 M0R143 59 aa8.29□□□□□ -1.08
TRIM28-205ENST00000595028 FXYD2P54710 66 aa8.29□□□□□ -1.08
TRIM28-205ENST00000595028 Q6JHZ5 121 aa8.29□□□□□ -1.08
TRIM28-205ENST00000595028 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
TRIM28-205ENST00000595028 CLEC2BQ92478 149 aa8.28□□□□□ -1.08
TRIM28-205ENST00000595028 C9orf92A6NGG3 77 aa8.26□□□□□ -1.09
TRIM28-205ENST00000595028 H0YGX0 51 aa8.26□□□□□ -1.09
TRIM28-205ENST00000595028 TCL1BO95988 128 aa8.26□□□□□ -1.09
TRIM28-205ENST00000595028 OCIAD2Q56VL3 154 aa8.26□□□□□ -1.09
TRIM28-205ENST00000595028 IGFL1Q6UW32 110 aa8.26□□□□□ -1.09
TRIM28-205ENST00000595028 FAM218AQ96MZ4 157 aa8.25□□□□□ -1.09
TRIM28-205ENST00000595028 KRTAP4-1Q9BYQ7 146 aa8.25□□□□□ -1.09
TRIM28-205ENST00000595028 PRO1854Q9UHT4 67 aa8.25□□□□□ -1.09
TRIM28-205ENST00000595028 SNHG12Q9BXW3 62 aa8.24□□□□□ -1.09
TRIM28-205ENST00000595028 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
TRIM28-205ENST00000595028 SNCGO76070 127 aa8.23□□□□□ -1.09
TRIM28-205ENST00000595028 PCP4L1A6NKN8 68 aa8.22□□□□□ -1.09
TRIM28-205ENST00000595028 H3BUT2 72 aa8.22□□□□□ -1.09
TRIM28-205ENST00000595028 BATFQ16520 125 aa8.22□□□□□ -1.09
TRIM28-205ENST00000595028 K7ERJ3 54 aa8.21□□□□□ -1.1
TRIM28-205ENST00000595028 A0A1B0GX51 115 aa8.2□□□□□ -1.1
TRIM28-205ENST00000595028 TRIAP1O43715 76 aa8.19□□□□□ -1.1
TRIM28-205ENST00000595028 PCOTHQ58A44 107 aa8.17□□□□□ -1.1
TRIM28-205ENST00000595028 PSMB2P49721 201 aa8.16□□□□□ -1.1
TRIM28-205ENST00000595028 NDUFV3P56181 108 aaKnown RBP8.16□□□□□ -1.1
TRIM28-205ENST00000595028 GHRHP01286 108 aa8.15□□□□□ -1.1
TRIM28-205ENST00000595028 Q6Q795 121 aa8.14□□□□□ -1.11
TRIM28-205ENST00000595028 FABP2P12104 132 aa8.12□□□□□ -1.11
TRIM28-205ENST00000595028 RPL37P61927 97 aaKnown RBP8.12□□□□□ -1.11
TRIM28-205ENST00000595028 SS18L2Q9UHA2 77 aa8.12□□□□□ -1.11
TRIM28-205ENST00000595028 H3BMG7 143 aa8.11□□□□□ -1.11
TRIM28-205ENST00000595028 COX6CP09669 75 aa8.11□□□□□ -1.11
TRIM28-205ENST00000595028 TEN1Q86WV5 123 aa8.11□□□□□ -1.11
TRIM28-205ENST00000595028 LST1O00453 97 aa8.1□□□□□ -1.11
TRIM28-205ENST00000595028 DNAL4O96015 105 aa8.1□□□□□ -1.11
TRIM28-205ENST00000595028 SCGB1C2P0DMR2 95 aa8.09□□□□□ -1.11
TRIM28-205ENST00000595028 ORMDL1Q9P0S3 153 aa8.09□□□□□ -1.11
TRIM28-205ENST00000595028 KRTAP9-7A8MTY7 169 aa8.08□□□□□ -1.12
TRIM28-205ENST00000595028 A0A087WSZ3 146 aa8.07□□□□□ -1.12
TRIM28-205ENST00000595028 COL5A1-AS1Q5SY13 56 aa8.07□□□□□ -1.12
TRIM28-205ENST00000595028 NAA38Q9BRA0 125 aaKnown RBP8.07□□□□□ -1.12
TRIM28-205ENST00000595028 H3BQ85 93 aa8.06□□□□□ -1.12
TRIM28-205ENST00000595028 LYRM7Q5U5X0 104 aa8.05□□□□□ -1.12
TRIM28-205ENST00000595028 OBSCN-AS1Q96MR7 158 aa8.05□□□□□ -1.12
TRIM28-205ENST00000595028 A0A1W2PNM2 257 aa8.04□□□□□ -1.12
TRIM28-205ENST00000595028 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
TRIM28-205ENST00000595028 TAX1BP3O14907 124 aa8.04□□□□□ -1.12
TRIM28-205ENST00000595028 KRTAP19-2Q3LHN2 52 aa8.04□□□□□ -1.12
TRIM28-205ENST00000595028 LCE2CQ5TA81 110 aa8.03□□□□□ -1.12
TRIM28-205ENST00000595028 A0A1B0GV72 72 aa8.02□□□□□ -1.13
TRIM28-205ENST00000595028 TMEM256-PLSCR3K7ERE1 68 aa8.02□□□□□ -1.13
TRIM28-205ENST00000595028 TRACP01848 142 aa8.02□□□□□ -1.13
TRIM28-205ENST00000595028 Q96NJ1 140 aa8.02□□□□□ -1.13
TRIM28-205ENST00000595028 ANKRD29Q8N6D5 301 aa8.01□□□□□ -1.13
TRIM28-205ENST00000595028 Q75L30 129 aa8□□□□□ -1.13
TRIM28-205ENST00000595028 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
TRIM28-205ENST00000595028 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.99□□□□□ -1.13
TRIM28-205ENST00000595028 UBE2V1Q13404 147 aa7.99□□□□□ -1.13
TRIM28-205ENST00000595028 A0A1W2PPM0 123 aa7.98□□□□□ -1.13
TRIM28-205ENST00000595028 ATXN8Q156A1 80 aa7.98□□□□□ -1.13
TRIM28-205ENST00000595028 TRBV20-1A0A075B6N2 111 aa7.96□□□□□ -1.14
TRIM28-205ENST00000595028 SIGMAR1Q99720 223 aa7.96□□□□□ -1.14
TRIM28-205ENST00000595028 CCKP06307 115 aa7.95□□□□□ -1.14
TRIM28-205ENST00000595028 ATP11AUNQ6ZP68 121 aa7.94□□□□□ -1.14
TRIM28-205ENST00000595028 MT1HP80294 61 aa7.93□□□□□ -1.14
TRIM28-205ENST00000595028 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
TRIM28-205ENST00000595028 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
TRIM28-205ENST00000595028 A8MUU9 505 aa7.91□□□□□ -1.14
TRIM28-205ENST00000595028 DSCR10P59022 87 aa7.91□□□□□ -1.14
TRIM28-205ENST00000595028 IGKV4-1P06312 121 aa7.9□□□□□ -1.14
TRIM28-205ENST00000595028 RBM3P98179 157 aaKnown RBP7.9□□□□□ -1.14
TRIM28-205ENST00000595028 FLGP20930 4061 aaPredicted RBP7.89□□□□□ -1.15
TRIM28-205ENST00000595028 BAALC-AS2P0C853 105 aa7.89□□□□□ -1.15
TRIM28-205ENST00000595028 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
TRIM28-205ENST00000595028 LINC00472Q9H8W2 130 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms