RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 BVES-AS1Q5T3Y7 98 aa12.27□□□□□ -0.45
GTF2F1-204ENST00000594965 KRTAP4-1Q9BYQ7 146 aa12.26□□□□□ -0.45
GTF2F1-204ENST00000594965 SEC61BP60468 96 aaKnown RBP12.25□□□□□ -0.45
GTF2F1-204ENST00000594965 FAT4Q6V0I7 4981 aa12.24□□□□□ -0.45
GTF2F1-204ENST00000594965 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.24□□□□□ -0.45
GTF2F1-204ENST00000594965 A0A0B4J2C4 111 aa12.23□□□□□ -0.45
GTF2F1-204ENST00000594965 LCE2AQ5TA79 106 aaPredicted RBP12.23□□□□□ -0.45
GTF2F1-204ENST00000594965 C1orf195Q5TG92 126 aa12.23□□□□□ -0.45
GTF2F1-204ENST00000594965 RAB37Q96AX2 223 aa12.23□□□□□ -0.45
GTF2F1-204ENST00000594965 F8WEM9 126 aa12.22□□□□□ -0.45
GTF2F1-204ENST00000594965 IGLV8-61A0A075B6I0 122 aa12.21□□□□□ -0.45
GTF2F1-204ENST00000594965 CEND1Q8N111 149 aa12.21□□□□□ -0.45
GTF2F1-204ENST00000594965 PYY3Q5JQD4 70 aa12.2□□□□□ -0.46
GTF2F1-204ENST00000594965 C9orf92A6NGG3 77 aa12.19□□□□□ -0.46
GTF2F1-204ENST00000594965 IGFL1Q6UW32 110 aa12.18□□□□□ -0.46
GTF2F1-204ENST00000594965 OCIAD2Q56VL3 154 aa12.17□□□□□ -0.46
GTF2F1-204ENST00000594965 PPDPFLQ8WWR9 84 aa12.17□□□□□ -0.46
GTF2F1-204ENST00000594965 FAM218AQ96MZ4 157 aa12.17□□□□□ -0.46
GTF2F1-204ENST00000594965 Q6JHZ5 121 aa12.16□□□□□ -0.46
GTF2F1-204ENST00000594965 FXYD2P54710 66 aa12.15□□□□□ -0.46
GTF2F1-204ENST00000594965 CLEC2BQ92478 149 aa12.14□□□□□ -0.47
GTF2F1-204ENST00000594965 H0YGX0 51 aa12.13□□□□□ -0.47
GTF2F1-204ENST00000594965 TCL1BO95988 128 aa12.12□□□□□ -0.47
GTF2F1-204ENST00000594965 PRO1854Q9UHT4 67 aa12.12□□□□□ -0.47
GTF2F1-204ENST00000594965 TRBV7-7A0A0K0K1E9 115 aa12.11□□□□□ -0.47
GTF2F1-204ENST00000594965 SNHG12Q9BXW3 62 aa12.11□□□□□ -0.47
GTF2F1-204ENST00000594965 TMEM238LA0A1B0GVL6 79 aa12.1□□□□□ -0.47
GTF2F1-204ENST00000594965 A6NJY4 79 aa12.1□□□□□ -0.47
GTF2F1-204ENST00000594965 TMA7Q9Y2S6 64 aaKnown RBP12.1□□□□□ -0.47
GTF2F1-204ENST00000594965 H3BUT2 72 aa12.09□□□□□ -0.47
GTF2F1-204ENST00000594965 PCOTHQ58A44 107 aa12.06□□□□□ -0.48
GTF2F1-204ENST00000594965 HSD52Q0P140 79 aa12.05□□□□□ -0.48
GTF2F1-204ENST00000594965 TRIAP1O43715 76 aa12.04□□□□□ -0.48
GTF2F1-204ENST00000594965 SNCGO76070 127 aa12.04□□□□□ -0.48
GTF2F1-204ENST00000594965 A0A1B0GX51 115 aa12.03□□□□□ -0.48
GTF2F1-204ENST00000594965 NDUFV3P56181 108 aaKnown RBP12.02□□□□□ -0.49
GTF2F1-204ENST00000594965 K7ERJ3 54 aa12□□□□□ -0.49
GTF2F1-204ENST00000594965 UQCR10Q9UDW1 63 aa11.98□□□□□ -0.49
GTF2F1-204ENST00000594965 Q6Q795 121 aa11.97□□□□□ -0.49
GTF2F1-204ENST00000594965 RPL37P61927 97 aaKnown RBP11.96□□□□□ -0.49
GTF2F1-204ENST00000594965 H3BMG7 143 aa11.93□□□□□ -0.5
GTF2F1-204ENST00000594965 FABP2P12104 132 aa11.93□□□□□ -0.5
GTF2F1-204ENST00000594965 KRTAP19-2Q3LHN2 52 aa11.93□□□□□ -0.5
GTF2F1-204ENST00000594965 LCE2CQ5TA81 110 aa11.93□□□□□ -0.5
GTF2F1-204ENST00000594965 GHRHP01286 108 aa11.92□□□□□ -0.5
GTF2F1-204ENST00000594965 TEN1Q86WV5 123 aa11.92□□□□□ -0.5
GTF2F1-204ENST00000594965 LST1O00453 97 aa11.91□□□□□ -0.5
GTF2F1-204ENST00000594965 PSMB2P49721 201 aa11.9□□□□□ -0.5
GTF2F1-204ENST00000594965 ORMDL1Q9P0S3 153 aa11.87□□□□□ -0.51
GTF2F1-204ENST00000594965 SS18L2Q9UHA2 77 aa11.87□□□□□ -0.51
GTF2F1-204ENST00000594965 A0A087WSZ3 146 aa11.86□□□□□ -0.51
GTF2F1-204ENST00000594965 A0A1W2PNM2 257 aa11.86□□□□□ -0.51
GTF2F1-204ENST00000594965 DNAL4O96015 105 aa11.85□□□□□ -0.51
GTF2F1-204ENST00000594965 COX6CP09669 75 aa11.85□□□□□ -0.51
GTF2F1-204ENST00000594965 KRTAP9-2Q9BYQ4 174 aa11.85□□□□□ -0.51
GTF2F1-204ENST00000594965 OBSCN-AS1Q96MR7 158 aa11.84□□□□□ -0.51
GTF2F1-204ENST00000594965 Q96NJ1 140 aa11.83□□□□□ -0.52
GTF2F1-204ENST00000594965 H3BQ85 93 aa11.8□□□□□ -0.52
GTF2F1-204ENST00000594965 TMEM256-PLSCR3K7ERE1 68 aa11.79□□□□□ -0.52
GTF2F1-204ENST00000594965 A0A1B0GV72 72 aa11.78□□□□□ -0.52
GTF2F1-204ENST00000594965 Q75L30 129 aa11.78□□□□□ -0.52
GTF2F1-204ENST00000594965 ANKRD29Q8N6D5 301 aa11.78□□□□□ -0.52
GTF2F1-204ENST00000594965 TRACP01848 142 aa11.76□□□□□ -0.53
GTF2F1-204ENST00000594965 TRBV7-4A0A0J9YYF1 115 aa11.74□□□□□ -0.53
GTF2F1-204ENST00000594965 SCGB1C2P0DMR2 95 aa11.74□□□□□ -0.53
GTF2F1-204ENST00000594965 MT1HP80294 61 aa11.74□□□□□ -0.53
GTF2F1-204ENST00000594965 UBE2V1Q13404 147 aa11.74□□□□□ -0.53
GTF2F1-204ENST00000594965 ATP11AUNQ6ZP68 121 aa11.69□□□□□ -0.54
GTF2F1-204ENST00000594965 C20orf166-AS1Q96NR2 134 aa11.68□□□□□ -0.54
GTF2F1-204ENST00000594965 CCKP06307 115 aa11.67□□□□□ -0.54
GTF2F1-204ENST00000594965 A8MUU9 505 aa11.66□□□□□ -0.54
GTF2F1-204ENST00000594965 SMIM6P0DI80 62 aa11.66□□□□□ -0.54
GTF2F1-204ENST00000594965 DSCR10P59022 87 aa11.66□□□□□ -0.54
GTF2F1-204ENST00000594965 M0R143 59 aa11.65□□□□□ -0.54
GTF2F1-204ENST00000594965 SIGMAR1Q99720 223 aa11.64□□□□□ -0.55
GTF2F1-204ENST00000594965 LINC00472Q9H8W2 130 aa11.64□□□□□ -0.55
GTF2F1-204ENST00000594965 IGKV4-1P06312 121 aa11.63□□□□□ -0.55
GTF2F1-204ENST00000594965 BAALC-AS2P0C853 105 aa11.62□□□□□ -0.55
GTF2F1-204ENST00000594965 RBM3P98179 157 aaKnown RBP11.62□□□□□ -0.55
GTF2F1-204ENST00000594965 NAA38Q9BRA0 125 aaKnown RBP11.62□□□□□ -0.55
GTF2F1-204ENST00000594965 DEFB116Q30KQ4 102 aa11.6□□□□□ -0.55
GTF2F1-204ENST00000594965 KRTAP16-1A8MUX0 517 aa11.57□□□□□ -0.56
GTF2F1-204ENST00000594965 NOTCH2NLQ7Z3S9 236 aa11.57□□□□□ -0.56
GTF2F1-204ENST00000594965 VPS25Q9BRG1 176 aa11.57□□□□□ -0.56
GTF2F1-204ENST00000594965 LINC00313P59037 77 aa11.56□□□□□ -0.56
GTF2F1-204ENST00000594965 COX6B2Q6YFQ2 88 aa11.56□□□□□ -0.56
GTF2F1-204ENST00000594965 DSCR8Q96T75 97 aa11.56□□□□□ -0.56
GTF2F1-204ENST00000594965 FLGP20930 4061 aaPredicted RBP11.56□□□□□ -0.56
GTF2F1-204ENST00000594965 ATXN8Q156A1 80 aa11.55□□□□□ -0.56
GTF2F1-204ENST00000594965 LCE2DQ5TA82 110 aaPredicted RBP11.53□□□□□ -0.56
GTF2F1-204ENST00000594965 C9JAW5 83 aa11.51□□□□□ -0.57
GTF2F1-204ENST00000594965 LORP23490 312 aaPredicted RBP11.51□□□□□ -0.57
GTF2F1-204ENST00000594965 LOC105371267A0A1B0GV96 52 aa11.5□□□□□ -0.57
GTF2F1-204ENST00000594965 KRTAP10-6P60371 365 aaPredicted RBP11.5□□□□□ -0.57
GTF2F1-204ENST00000594965 TSTD3H0UI37 97 aa11.48□□□□□ -0.57
GTF2F1-204ENST00000594965 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
GTF2F1-204ENST00000594965 Q6ZQT0 140 aa11.45□□□□□ -0.58
GTF2F1-204ENST00000594965 JMJD7-PLA2G4BH0Y9G9 81 aa11.44□□□□□ -0.58
GTF2F1-204ENST00000594965 M0R2T5 61 aa11.44□□□□□ -0.58
GTF2F1-204ENST00000594965 BATFQ16520 125 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms