RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 Q75L30 129 aa8.25□□□□□ -1.09
GTF2F1-203ENST00000594213 TRBV7-7A0A0K0K1E9 115 aa8.24□□□□□ -1.09
GTF2F1-203ENST00000594213 Q6JHZ5 121 aa8.24□□□□□ -1.09
GTF2F1-203ENST00000594213 F8WEM9 126 aa8.23□□□□□ -1.09
GTF2F1-203ENST00000594213 IGFL1Q6UW32 110 aa8.23□□□□□ -1.09
GTF2F1-203ENST00000594213 ATOH7Q8N100 152 aa8.23□□□□□ -1.09
GTF2F1-203ENST00000594213 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
GTF2F1-203ENST00000594213 OBSCN-AS1Q96MR7 158 aa8.22□□□□□ -1.09
GTF2F1-203ENST00000594213 USH2AO75445 5202 aa8.21□□□□□ -1.09
GTF2F1-203ENST00000594213 C20orf202A1L168 122 aa8.21□□□□□ -1.1
GTF2F1-203ENST00000594213 OCIAD2Q56VL3 154 aa8.21□□□□□ -1.1
GTF2F1-203ENST00000594213 ATP11AUNQ6ZP68 121 aa8.21□□□□□ -1.1
GTF2F1-203ENST00000594213 Q6ZQY7 126 aa8.21□□□□□ -1.1
GTF2F1-203ENST00000594213 SSPOA2VEC9 5147 aa8.21□□□□□ -1.1
GTF2F1-203ENST00000594213 VAMP3Q15836 100 aa8.2□□□□□ -1.1
GTF2F1-203ENST00000594213 hADV29S1A0JD25 119 aa8.19□□□□□ -1.1
GTF2F1-203ENST00000594213 Q6Q795 121 aa8.19□□□□□ -1.1
GTF2F1-203ENST00000594213 KRTAP9-8Q9BYQ0 159 aa8.19□□□□□ -1.1
GTF2F1-203ENST00000594213 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
GTF2F1-203ENST00000594213 SNRPEP62304 92 aaKnown RBP8.15□□□□□ -1.1
GTF2F1-203ENST00000594213 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.15□□□□□ -1.1
GTF2F1-203ENST00000594213 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
GTF2F1-203ENST00000594213 C20orf166-AS1Q96NR2 134 aa8.13□□□□□ -1.11
GTF2F1-203ENST00000594213 KRTAP9-7A8MTY7 169 aa8.12□□□□□ -1.11
GTF2F1-203ENST00000594213 LST1O00453 97 aa8.12□□□□□ -1.11
GTF2F1-203ENST00000594213 CFC1P0CG37 223 aa8.12□□□□□ -1.11
GTF2F1-203ENST00000594213 Q96NJ1 140 aa8.12□□□□□ -1.11
GTF2F1-203ENST00000594213 A8MUU9 505 aa8.11□□□□□ -1.11
GTF2F1-203ENST00000594213 H3BUT2 72 aa8.1□□□□□ -1.11
GTF2F1-203ENST00000594213 TMA7Q9Y2S6 64 aaKnown RBP8.1□□□□□ -1.11
GTF2F1-203ENST00000594213 SNHG12Q9BXW3 62 aa8.09□□□□□ -1.11
GTF2F1-203ENST00000594213 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
GTF2F1-203ENST00000594213 FCGBPQ9Y6R7 5405 aaPredicted RBP8.07□□□□□ -1.12
GTF2F1-203ENST00000594213 SCGB1D1O95968 90 aa8.06□□□□□ -1.12
GTF2F1-203ENST00000594213 BVES-AS1Q5T3Y7 98 aa8.06□□□□□ -1.12
GTF2F1-203ENST00000594213 SS18L2Q9UHA2 77 aa8.04□□□□□ -1.12
GTF2F1-203ENST00000594213 C12orf57Q99622 126 aa8.03□□□□□ -1.12
GTF2F1-203ENST00000594213 MT2AP02795 61 aa8.02□□□□□ -1.13
GTF2F1-203ENST00000594213 TEN1Q86WV5 123 aa8.02□□□□□ -1.13
GTF2F1-203ENST00000594213 HIST1H2BLQ99880 126 aa8.02□□□□□ -1.13
GTF2F1-203ENST00000594213 TRBV20-1A0A075B6N2 111 aa8.01□□□□□ -1.13
GTF2F1-203ENST00000594213 KRTAP16-1A8MUX0 517 aa8.01□□□□□ -1.13
GTF2F1-203ENST00000594213 HIST3H2BBQ8N257 126 aa8.01□□□□□ -1.13
GTF2F1-203ENST00000594213 HSBP1L1C9JCN9 74 aa8□□□□□ -1.13
GTF2F1-203ENST00000594213 A0A087WSZ3 146 aa7.98□□□□□ -1.13
GTF2F1-203ENST00000594213 NDUFV3P56181 108 aaKnown RBP7.98□□□□□ -1.13
GTF2F1-203ENST00000594213 HIST1H4GQ99525 98 aa7.98□□□□□ -1.13
GTF2F1-203ENST00000594213 LCE2BO14633 110 aa7.97□□□□□ -1.13
GTF2F1-203ENST00000594213 DSCR10P59022 87 aa7.97□□□□□ -1.13
GTF2F1-203ENST00000594213 FAM218AQ96MZ4 157 aa7.97□□□□□ -1.13
GTF2F1-203ENST00000594213 MT1FP04733 61 aa7.96□□□□□ -1.14
GTF2F1-203ENST00000594213 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
GTF2F1-203ENST00000594213 KRTAP9-3Q9BYQ3 159 aa7.95□□□□□ -1.14
GTF2F1-203ENST00000594213 H0YGX0 51 aa7.94□□□□□ -1.14
GTF2F1-203ENST00000594213 COX8AP10176 69 aa7.93□□□□□ -1.14
GTF2F1-203ENST00000594213 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
GTF2F1-203ENST00000594213 A0A1W2PNM2 257 aa7.92□□□□□ -1.14
GTF2F1-203ENST00000594213 H3BMG7 143 aa7.92□□□□□ -1.14
GTF2F1-203ENST00000594213 DLEU1O43261 78 aa7.92□□□□□ -1.14
GTF2F1-203ENST00000594213 HRES1P13985 223 aa7.92□□□□□ -1.14
GTF2F1-203ENST00000594213 S100A2P29034 98 aa7.92□□□□□ -1.14
GTF2F1-203ENST00000594213 SNCGO76070 127 aa7.9□□□□□ -1.14
GTF2F1-203ENST00000594213 LINC00313P59037 77 aa7.9□□□□□ -1.14
GTF2F1-203ENST00000594213 A0A0B4J2C4 111 aa7.89□□□□□ -1.15
GTF2F1-203ENST00000594213 A0A1B0GX51 115 aa7.88□□□□□ -1.15
GTF2F1-203ENST00000594213 NOTCH2NLQ7Z3S9 236 aa7.88□□□□□ -1.15
GTF2F1-203ENST00000594213 RAB37Q96AX2 223 aa7.88□□□□□ -1.15
GTF2F1-203ENST00000594213 FAM236DA0A1B0GTK5 79 aa7.87□□□□□ -1.15
GTF2F1-203ENST00000594213 FAM236CP0DP71 79 aa7.87□□□□□ -1.15
GTF2F1-203ENST00000594213 SIGMAR1Q99720 223 aa7.87□□□□□ -1.15
GTF2F1-203ENST00000594213 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
GTF2F1-203ENST00000594213 FABP2P12104 132 aa7.85□□□□□ -1.15
GTF2F1-203ENST00000594213 HIGD1BQ9P298 99 aa7.85□□□□□ -1.15
GTF2F1-203ENST00000594213 GHRHP01286 108 aa7.84□□□□□ -1.15
GTF2F1-203ENST00000594213 IGKV4-1P06312 121 aa7.84□□□□□ -1.15
GTF2F1-203ENST00000594213 RBM12B-AS1Q9P1G2 102 aa7.84□□□□□ -1.15
GTF2F1-203ENST00000594213 TRBV7-4A0A0J9YYF1 115 aa7.83□□□□□ -1.16
GTF2F1-203ENST00000594213 C14orf144Q96I85 54 aa7.83□□□□□ -1.16
GTF2F1-203ENST00000594213 LINC00472Q9H8W2 130 aa7.83□□□□□ -1.16
GTF2F1-203ENST00000594213 S100A6P06703 90 aa7.82□□□□□ -1.16
GTF2F1-203ENST00000594213 C2orf91Q6ZV80 131 aa7.82□□□□□ -1.16
GTF2F1-203ENST00000594213 SMIM6P0DI80 62 aa7.81□□□□□ -1.16
GTF2F1-203ENST00000594213 ANKRD29Q8N6D5 301 aa7.79□□□□□ -1.16
GTF2F1-203ENST00000594213 PRO1854Q9UHT4 67 aa7.79□□□□□ -1.16
GTF2F1-203ENST00000594213 TRIAP1O43715 76 aa7.78□□□□□ -1.16
GTF2F1-203ENST00000594213 DEFB116Q30KQ4 102 aa7.78□□□□□ -1.16
GTF2F1-203ENST00000594213 MACF1Q9UPN3 7388 aaKnown RBP7.77□□□□□ -1.17
GTF2F1-203ENST00000594213 CEND1Q8N111 149 aa7.77□□□□□ -1.17
GTF2F1-203ENST00000594213 IGHV6-1A0A0B4J1U7 121 aa7.75□□□□□ -1.17
GTF2F1-203ENST00000594213 SYNE2Q8WXH0 6885 aaKnown RBP7.74□□□□□ -1.17
GTF2F1-203ENST00000594213 FXYD2P54710 66 aa7.74□□□□□ -1.17
GTF2F1-203ENST00000594213 SPATA45Q537H7 98 aa7.74□□□□□ -1.17
GTF2F1-203ENST00000594213 PAM16Q9Y3D7 125 aa7.74□□□□□ -1.17
GTF2F1-203ENST00000594213 H3BQ85 93 aa7.73□□□□□ -1.17
GTF2F1-203ENST00000594213 KRTAP19-6Q3LI70 58 aa7.73□□□□□ -1.17
GTF2F1-203ENST00000594213 ORMDL1Q9P0S3 153 aa7.73□□□□□ -1.17
GTF2F1-203ENST00000594213 A0A1B0GV72 72 aa7.72□□□□□ -1.17
GTF2F1-203ENST00000594213 TMEM238LA0A1B0GVL6 79 aa7.71□□□□□ -1.18
GTF2F1-203ENST00000594213 A6NJY4 79 aa7.71□□□□□ -1.18
GTF2F1-203ENST00000594213 CCKP06307 115 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms