RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 IGHV3-30P01768 117 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 CTSGP08311 255 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 SAA2P0DJI9 122 aaPredicted RBP2.54□□□□□ -2
SMAD4-216ENST00000593223 IGHV3-30-5P0DP03 117 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 LYNX1P0DP58 116 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 C20orf197Q8N268 126 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 WFDC9Q8NEX5 89 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 KIAA2026Q5HYC2 2103 aa2.54□□□□□ -2
SMAD4-216ENST00000593223 IGLV3-32A0A0A0MS00 114 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 TRBV6-7A0A0A0MS04 114 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 TRBV6-8A0A0A6YYG3 113 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 F8WEM9 126 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 FXYD1O00168 92 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 PLGLAQ15195 96 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 AMELXQ99217 191 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 NDUFA4L2Q9NRX3 87 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 DNAH5Q8TE73 4624 aa2.53□□□□□ -2
SMAD4-216ENST00000593223 VPS13BQ7Z7G8 4022 aa2.52□□□□□ -2.01
SMAD4-216ENST00000593223 ARFGEF3Q5TH69 2177 aa2.52□□□□□ -2.01
SMAD4-216ENST00000593223 CEBPZOSA8MTT3 80 aa2.52□□□□□ -2.01
SMAD4-216ENST00000593223 H0YGG7 62 aa2.52□□□□□ -2.01
SMAD4-216ENST00000593223 HRES1P13985 223 aa2.52□□□□□ -2.01
SMAD4-216ENST00000593223 LRP2P98164 4655 aa2.51□□□□□ -2.01
SMAD4-216ENST00000593223 IGKV3-7A0A075B6H7 116 aa2.51□□□□□ -2.01
SMAD4-216ENST00000593223 HMGN4O00479 90 aa2.51□□□□□ -2.01
SMAD4-216ENST00000593223 GCHFRP30047 84 aa2.51□□□□□ -2.01
SMAD4-216ENST00000593223 SSBP1Q04837 148 aaKnown RBP2.51□□□□□ -2.01
SMAD4-216ENST00000593223 PYDC2Q56P42 97 aa2.51□□□□□ -2.01
SMAD4-216ENST00000593223 Q6JHZ5 121 aa2.51□□□□□ -2.01
SMAD4-216ENST00000593223 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
SMAD4-216ENST00000593223 ARHGAP32A7KAX9 2087 aa2.51□□□□□ -2.01
SMAD4-216ENST00000593223 FAM223BA6NKX1 122 aa2.5□□□□□ -2.01
SMAD4-216ENST00000593223 DEFB112Q30KQ8 113 aa2.5□□□□□ -2.01
SMAD4-216ENST00000593223 DEFB134Q4QY38 66 aa2.5□□□□□ -2.01
SMAD4-216ENST00000593223 ATP5EP2Q5VTU8 51 aa2.5□□□□□ -2.01
SMAD4-216ENST00000593223 PSENENQ9NZ42 101 aa2.5□□□□□ -2.01
SMAD4-216ENST00000593223 HEATR5BQ9P2D3 2071 aa2.49□□□□□ -2.01
SMAD4-216ENST00000593223 IGKV4-1P06312 121 aa2.49□□□□□ -2.01
SMAD4-216ENST00000593223 C3orf79P0CE67 100 aa2.49□□□□□ -2.01
SMAD4-216ENST00000593223 PDE6GP18545 87 aa2.49□□□□□ -2.01
SMAD4-216ENST00000593223 SPAG11BQ08648 103 aa2.49□□□□□ -2.01
SMAD4-216ENST00000593223 SPAG11AQ6PDA7 123 aa2.49□□□□□ -2.01
SMAD4-216ENST00000593223 DOCK11Q5JSL3 2073 aa2.48□□□□□ -2.01
SMAD4-216ENST00000593223 TRBV6-4A0A1B0GX49 114 aa2.48□□□□□ -2.01
SMAD4-216ENST00000593223 PPP1R17O96001 155 aa2.48□□□□□ -2.01
SMAD4-216ENST00000593223 ARMS2P0C7Q2 107 aa2.48□□□□□ -2.01
SMAD4-216ENST00000593223 IFI27P40305 119 aaPredicted RBP2.48□□□□□ -2.01
SMAD4-216ENST00000593223 DEFB108BQ8NET1 73 aa2.48□□□□□ -2.01
SMAD4-216ENST00000593223 LEPROTL1O95214 131 aa2.47□□□□□ -2.01
SMAD4-216ENST00000593223 FAM74A4Q5TZK3 123 aa2.47□□□□□ -2.01
SMAD4-216ENST00000593223 PPP1R1CQ8WVI7 109 aa2.47□□□□□ -2.01
SMAD4-216ENST00000593223 ARL2-SNX15V9GYD0 113 aa2.47□□□□□ -2.01
SMAD4-216ENST00000593223 SNRPGP15A8MWD9 76 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 D6R8Y8 96 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 JMJD7-PLA2G4BH0Y9G9 81 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 CCL3L1P16619 93 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 BRD3OSQ6XYD6 125 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 MUSTN1Q8IVN3 82 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 COX7B2Q8TF08 81 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 UBE2D4Q9Y2X8 147 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 R4GMQ9 66 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 PKHD1L1Q86WI1 4243 aa2.46□□□□□ -2.02
SMAD4-216ENST00000593223 A0A0G2JQZ4 141 aa2.45□□□□□ -2.02
SMAD4-216ENST00000593223 PPYP01298 95 aa2.45□□□□□ -2.02
SMAD4-216ENST00000593223 IGLV3-1P01715 115 aa2.45□□□□□ -2.02
SMAD4-216ENST00000593223 BAGE3Q86Y29 109 aa2.45□□□□□ -2.02
SMAD4-216ENST00000593223 BAGE2Q86Y30 109 aa2.45□□□□□ -2.02
SMAD4-216ENST00000593223 HILPDAQ9Y5L2 63 aa2.45□□□□□ -2.02
SMAD4-216ENST00000593223 DNAL4O96015 105 aa2.44□□□□□ -2.02
SMAD4-216ENST00000593223 TPRXLQ17RH7 258 aa2.44□□□□□ -2.02
SMAD4-216ENST00000593223 A0A1W2PNN7 141 aa2.43□□□□□ -2.02
SMAD4-216ENST00000593223 F8VRH5 84 aa2.43□□□□□ -2.02
SMAD4-216ENST00000593223 LELP1Q5T871 98 aa2.43□□□□□ -2.02
SMAD4-216ENST00000593223 LINC00304Q8N9R0 145 aa2.43□□□□□ -2.02
SMAD4-216ENST00000593223 GNG13Q9P2W3 67 aa2.43□□□□□ -2.02
SMAD4-216ENST00000593223 KLK9Q9UKQ9 250 aa2.43□□□□□ -2.02
SMAD4-216ENST00000593223 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
SMAD4-216ENST00000593223 HEATR1Q9H583 2144 aaKnown RBP2.42□□□□□ -2.02
SMAD4-216ENST00000593223 CCL18P55774 89 aa2.42□□□□□ -2.02
SMAD4-216ENST00000593223 C10orf55Q5SWW7 151 aa2.42□□□□□ -2.02
SMAD4-216ENST00000593223 ZNF563Q8TA94 476 aa2.42□□□□□ -2.02
SMAD4-216ENST00000593223 PRR15LQ9BU68 103 aa2.42□□□□□ -2.02
SMAD4-216ENST00000593223 LINC00846Q9NV44 126 aa2.42□□□□□ -2.02
SMAD4-216ENST00000593223 LRP1Q07954 4544 aaKnown RBP2.42□□□□□ -2.02
SMAD4-216ENST00000593223 IGKV3D-7A0A0C4DH55 119 aa2.41□□□□□ -2.02
SMAD4-216ENST00000593223 IGKV3OR2-268A0A0C4DH90 116 aa2.41□□□□□ -2.02
SMAD4-216ENST00000593223 TRBV6-5A0A0K0K1A5 114 aa2.41□□□□□ -2.02
SMAD4-216ENST00000593223 H3BVH4 76 aa2.41□□□□□ -2.02
SMAD4-216ENST00000593223 UQCR11O14957 56 aa2.41□□□□□ -2.02
SMAD4-216ENST00000593223 ATXN8Q156A1 80 aa2.41□□□□□ -2.02
SMAD4-216ENST00000593223 SPACA4Q8TDM5 124 aa2.41□□□□□ -2.02
SMAD4-216ENST00000593223 V9GYV3 84 aa2.41□□□□□ -2.02
SMAD4-216ENST00000593223 IGKV2-40A0A087WW87 121 aaPredicted RBP2.4□□□□□ -2.03
SMAD4-216ENST00000593223 IGKV2D-40P01614 121 aaPredicted RBP2.4□□□□□ -2.03
SMAD4-216ENST00000593223 IGLV6-57P01721 117 aa2.4□□□□□ -2.03
SMAD4-216ENST00000593223 RNASE3P12724 160 aaKnown RBP2.4□□□□□ -2.03
SMAD4-216ENST00000593223 HCP5Q6MZN7 132 aa2.4□□□□□ -2.03
SMAD4-216ENST00000593223 TMEM14CQ9P0S9 112 aa2.4□□□□□ -2.03
SMAD4-216ENST00000593223 FXYD6-FXYD2A0A087WZ82 144 aa2.39□□□□□ -2.03
SMAD4-216ENST00000593223 TRBV7-4A0A0J9YYF1 115 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms